KEGG   Apostichopus japonicus (Japanese sea cucumber): 139984408
Entry
139984408         CDS       T10891                                 
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1
  KO
K23113  structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Brite
Chromosome and associated proteins [BR:ajj03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    139984408
DNA repair and recombination proteins [BR:ajj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     139984408
SSDB
Other DBs
NCBI-GeneID: 139984408
NCBI-ProteinID: XP_071854421
LinkDB
Position
17:28096134..28146014
AA seq 2030 aa
MALRFGADSFVPGNEAPANNSHVFVFDRRSGSFPEKVVDISDIHEFTTFNVKLRSAFCIS
KSAKFVVVTTDRKQIHDDDSYSQFIHNLVTLYILVDINQPLLAPTKERIDYLPHYDTLVK
SGMYEYYASEGKNPLPFAFAELIDNALTATNENAGPRYIEVRMYFNDTPEKCMVCVLDNG
RGMTSSELNNWAIYRLSKFSQRRQTDHEHDEPTRSQKRQAEEYPRFLNSDISYFGVGGKA
AIFFIGQSARMISKSSTSADVHELSLSKEEFERREREKESIYKGYIHNRQAGDASHFTES
DENIIKLLQEELGQESFTHVVITGIKPEHVQYLREDFNRWCTQLVHIYHYYLHGPEGNNL
PRSNQTPSRANSPFRHINIVISHYNKGKLLQKRNLRDVDDDMQSKFLSTAAATFDFRARV
EGDAVVEGSLRYHPFLYNKETYPLDNSNWYAPRDDGSDDDGFQQEDRPARGNRPIFDCYW
NGRLIPYTTVDEFDWCGVPKRMGNIPIQCYNRVSGVLWTNDKFQVSTNKLTFLDLGVRLK
EKSTYFERITSGQPQRSIHRKFSDWLRDCHERCDKQVLFQGFKECITRTDVAIKKHQYPW
SVFESIVWEGKQFTAGQLVRTTRTNPIIYGTIKNFLLFGFHDGDVFATGGEMVLIQEPSM
LYNELKTFPLSRLDRAAGDRAMKKGMDEEEGKLPHSLLVKWPDGNEVKPGSKVPAGSVIG
DIQVQLVNKKGEEIVKLPNTNTAAKRFLMEQILIKHSSVGDSRIVYHISQHNKLWAHWFH
RIEVVRDVGSYSLVLQAVLGESGATKFAGKTLPNVRIKFTVIEGPPAKFSIGLMEGPCRI
GVPFSIPLQLRDIFNHLCKPDMSLIPEVKANGLDLRWQGVESKNKLLYIKNVTASGKVLS
TQDFNLKVTIRSLQDATQKLRVRMLPGAVHSIKVTEFSRGTTTLENGEALSLEVELLDEA
GNPTVERGAKVTCKFIGRPGLPVYKSACSQSGTTQLTGKPILLKNMSKTSVKITAKVELE
GSSSRVSAVEQMVEIVPGTTPHFINVRYKDKTGKEITLVDGEVIECTVGEAVSNLVFAIW
DEGRRQLPLTPSLVDKITVNWQSKQDEELIRQGRLPDVKAPTKVDESKYCKIDVTEGQGL
SFSFSVKPLVGIPHHLKCVCKGSQSVKLNEFLDDIVEVHVTDSYGNSLKRLPQRALSKLK
VTGRGLDEKALEIRNLPNIGFALNRLRFRGTDMSPKDVTVEYKEFRDIFRITVESGQPSQ
LQFVHYAPSDVIHLNQGNQLPKSLQLQICDSDGNPCKEPTAVFNLQIPSGLKLKNVSLSL
KAQKYGRVDFGRPHVEGDWNRYEIGTSATIGRKKLNGPKLFVMIEADDTQPSKISVNYKK
NWTYRVGEAMPDFEVRVESEAGTVLDNLPSQCICMRQWKPSSSQQVLPPSSAFSWVVDPH
QTEDDPNCFYFRGRQAPEKAGFHHVIFEGNFKGSQIHSNVIVANVQPGAPESLAASTSPP
TTLSVSNTPQPSSRCLISSMKLYLKDKYGNITGQNIYGQVKVTLYGKDSKEVPRLTQNQS
SMIFPLKNGAVQLSNLYLQEGTPGQDGHEYVLKIALEDTTSKSGKTDVKPYLQPFMFYND
AKKQERMVTLNRERDDCRLILKKYDQIFSDSKEVHDTLKSEVKAVEQKESGLKNKLKRLG
VPHTAILSLVSVNDTLRLCEDAKTNIEQAPRRSCKLQRFPSSDPDVLGKVAHLAEVEDDT
IAWVLSWHLMSEMDCVITKTTAKAKEVHAACSGSQQVLPIDSIFSRNLPSWNSPLPHEKV
SSLRQTMRPAGNPIHARHLLTFTKDEEDCRLLFRMILGDTIIFDTLDDATDYRKQVVQYT
SCPTLLTREGNRMRSSGKFGGFQNRAPPLVKLRGILFGAPIPAKYGQTLEQIGVLRELKE
VIEEREAAVTELQEHVNEMNSSKSQGRHREMEETRERLVQIEAKLKKAGKDQIVNNPLPM
DTLDERQDTNRRSPRAAQLRDPRLQRDRTVATRRGAPSQPSDSPEPKRRR
NT seq 6093 nt   +upstreamnt  +downstreamnt
atggcgctgcgctttggtgcagacagcttcgtccctggaaacgaagcaccagcgaacaat
tctcacgtgtttgtgtttgatagacgaagtggctcatttccagaaaaagttgtagatatt
agcgatatccatgaatttacaacttttaacgttaaactgcgaagtgcattctgtatttcc
aagtctgcgaagtttgttgttgtgacgactgacagaaaacagattcacgatgatgattca
tactcccaatttatccataaccttgtcaccctttatattttggtggatatcaaccaacca
ttgctcgcacctacaaaagaaaggatcgactacctcccgcactatgacacactggtcaag
agtgggatgtacgaatactacgccagcgagggcaaaaatccactgccatttgcatttgcc
gaacttattgacaatgccctgacagccaccaatgaaaatgctggtccgagatatatcgaa
gtgagaatgtatttcaatgacaccccagagaagtgcatggtctgtgtgttggacaatggc
aggggcatgacatcatcagagctgaataattgggccatctaccgtctctcaaagttcagt
cagaggagacagacggatcacgagcacgatgaaccaacaaggtctcagaaacgacaggca
gaagagtacccacggttcttgaatagtgatatttcctactttggggtcggaggaaaagca
gctatattttttatcggccaatctgcgaggatgatttcaaagagctctacatcagctgat
gtgcatgaactctcgttatccaaggaggaatttgagaggcgggaaagagagaaggagtca
atctacaaaggttacattcataatagacaggccggtgacgctagtcatttcacagagagc
gatgaaaacatcatcaaactgttgcaagaagagctaggccaagagagtttcacacacgtt
gtaatcactggtatcaagccagagcatgttcagtatctcagggaagacttcaacagatgg
tgtacacaacttgttcacatatatcattattacctccacggcccagagggtaacaacctc
ccaagatctaaccagacccccagcagagccaacagccctttccgtcacatcaacattgtc
atctcacattacaacaagggcaagctgttacagaagaggaacctcagggacgtcgacgat
gacatgcaatcaaagttcctctccactgcggcagcaacgtttgacttcagagccagagtc
gaaggggatgcggtggtggagggttcgttgaggtaccatcctttcctctacaacaaggag
acgtacccattggataatagcaactggtatgctcctagggatgatggttcagatgacgat
ggatttcagcaggaggacagaccagcgagaggcaatcggccaatctttgattgctactgg
aacggaagactaattccgtacaccaccgtagacgaattcgattggtgtggggttcctaag
aggatgggtaacatccctatccaatgctacaacagagtgtcgggcgtactctggacgaac
gataaatttcaagtcagtacaaacaaattgaccttcctggatttgggagtcaggctgaag
gagaagtcgacttactttgaaagaatcacctctggacagccccaacggtccatccatcgt
aaattttccgactggctgagagactgccacgagaggtgcgataagcaggtgctcttccaa
ggatttaaggaatgtatcactcggacggacgtagccatcaagaagcaccagtacccttgg
tcagtgtttgaaagtatcgtctgggaaggtaaacagttcactgctggacaattggttcga
actaccaggactaatcccataatctacggcaccatcaaaaacttccttctctttgggttt
cacgatggagatgtctttgcaacgggcggtgagatggttcttattcaggaaccaagcatg
ctgtataatgaactgaaaacgtttccgttgtcgaggctggacagagcagcgggggatcgt
gcaatgaagaaaggaatggacgaagaagaaggaaaacttccccattcactgctggtgaag
tggccagatggtaacgaggttaaacctggaagtaaggttcctgctggttcagttattggt
gatattcaagtccagcttgtaaacaagaaaggggaagagatcgttaagctgccaaacaca
aacacagctgctaaaagattcttgatggaacaaatactgattaaacatagttctgttgga
gattccaggattgtttatcacatcagccaacacaacaagctgtgggctcattggttccat
cgtatagaggttgttcgggatgtcggctcgtactccctggtactgcaagcggtcttggga
gagagcggggcaacaaaatttgccgggaagactctacccaacgtgagaatcaaattcacg
gtcatagagggtccaccagcaaagttcagcatcggcctgatggaaggcccatgtcggatt
ggggtccccttctccattcctcttcagctgcgagacatattcaaccacctgtgcaagccg
gatatgtcactcatccctgaggtcaaagcaaatggcctggacttgaggtggcagggtgta
gagtcaaagaacaaattactttacataaagaacgtcacagccagtggaaaggtcttatca
acacaagatttcaatctcaaggtgaccatccgtagcttgcaagatgctactcaaaaactc
agggtccgtatgctaccaggtgctgttcattccatcaaggtcactgagttctcccgaggt
acaaccacgctggagaatggtgaagctctgtccttggaggtggagcttcttgatgaggca
ggaaatccgaccgttgagagaggtgctaaagtaacatgcaagtttattggacgtccaggt
ttacctgtttacaagtcagcttgcagtcagagtggcacaacgcagttgaccggtaaaccg
atacttctgaagaacatgagtaaaacttctgtcaaaatcactgcaaaggttgaattggag
ggttcgtctagtagagtgtccgcagtggaacaaatggttgaaatcgtgccggggaccact
ccgcatttcatcaatgtgcggtacaaggataagacgggaaaggaaatcacactggttgat
ggtgaagtcatagaatgtaccgttggtgaagccgtctcaaatttagtgtttgccatctgg
gacgaaggacgtcgtcagctgcccctgactccatccctggtcgacaagatcaccgtcaat
tggcaatcgaagcaagacgaggaattgatcaggcaaggccgactccccgatgtgaaagct
cctaccaaggtagacgagagtaaatattgtaaaatagacgtgacagaagggcaaggactc
tccttcagtttctcggtcaaaccactggtcggcatccctcatcatctcaagtgtgtatgc
aagggcagccaatcggtcaaactgaatgagtttctggacgatatcgtagaagtgcatgta
actgacagttacggtaattcattgaagagattaccgcagagggcgttaagtaaattgaaa
gtcaccggtagaggcctggatgagaaagctctggagatacggaaccttccgaacattggc
tttgcgctcaacagactacgtttccgtgggacggatatgagccccaaagacgtcacggtc
gaatacaaggaatttagggacatcttcagaataacggtcgaatccggacaacccagtcag
ctgcaatttgtgcattatgcaccgagtgatgtcatccatttaaatcagggtaaccaactg
ccaaagtctcttcagctgcagatatgcgacagcgacggtaatccgtgtaaagaacccaca
gctgtgtttaatctccaaatccccagtggattaaagctgaaaaatgtgagcttgagtttg
aaagcacagaaatatgggagagttgattttgggagaccacatgtggaaggggattggaac
cgatacgagattggtacgtcagctacgattggacgaaagaaactgaacggtcctaaatta
tttgtgatgatcgaagcagacgatacgcagccttccaaaatctctgttaactacaagaag
aattggacgtacagagtcggggaagcaatgccagattttgaagtcagagtagagagtgag
gcgggcacagtgttagataatctgccatcgcagtgtatatgcatgagacagtggaagccc
tcttccagtcaacaagtcttacccccttcatcggccttctcttgggtggtggacccccat
caaacggaggatgatcccaactgtttttacttcagaggtcgacaggccccagagaaggca
gggtttcatcatgttatctttgagggaaacttcaaagggtctcagattcatagcaatgtg
atcgttgccaatgtacagccaggtgctcctgaatctctggcagcaagcacctctcctcct
actactctgtctgtatccaatactccacaaccatccagcagatgcctcatctcatctatg
aagctgtacctcaaggacaaatatggcaatatcacaggacagaacatctatggacaggtc
aaagttactctgtacggtaaggatagcaaggaggttccaagactaacacaaaaccaatcc
tcaatgatattcccccttaagaatggggctgtgcagttatcgaatctttatcttcaagag
ggtacaccaggccaagatggtcatgaatatgtattaaagattgcattggaagataccact
tccaagtcggggaagacagacgtcaagccttacctccaaccatttatgttctataatgat
gcaaagaaacaggagcgaatggtaaccttgaacagggagagagatgactgcagactcatt
ctgaagaaatacgatcagatattttcagattctaaagaagtccacgataccctgaaaagt
gaagtgaaagctgttgaacagaaagaaagtggcttgaagaataaattgaagaggctgggt
gtaccccacactgcaatactgtcattggtttcagtcaacgataccttgaggctctgtgaa
gatgccaagacgaacatcgagcaagctccccggaggtcctgtaagctgcaaaggttcccg
tccagtgacccggatgtcctaggaaaggtcgctcatctagctgaggttgaggacgatacc
atcgcgtgggtgctctcgtggcatttgatgagcgagatggactgcgtgatcaccaagacc
acggccaaggccaaagaggtccacgctgcctgcagcggttcacaacaggtgcttccgata
gattcaatcttcagcagaaatcttcccagttggaacagcccactccctcacgagaaggtc
tcaagtctgagacagacaatgaggccggccggtaatccaattcatgccaggcatctctta
acattcaccaaagatgaagaagactgccgtctgttgtttcgaatgatactgggtgatacc
atcatctttgacacgttagatgatgccactgactacagaaaacaggtggtacagtacaca
tcttgtcctactctcctgaccagagagggtaatcgcatgagaagcagcggcaaattcggt
ggcttccaaaacagagcgccgcctctggtgaaattaagagggattctattcggtgctccc
ataccggccaaatacggacaaactttagaacagatcggagttcttagagagttgaaagag
gtgatcgaagaaagagaggcagctgttactgaattacaggagcatgtcaacgagatgaac
tcgagtaaatcccagggacgccacagagagatggaagagaccagagaacgactcgtccaa
atcgaagcaaaactcaagaaggccggcaaagaccaaatcgttaacaaccctctaccaatg
gatacccttgacgagagacaggacaccaaccggaggagtcccagggctgcgcagctgaga
gacccgaggttacagagagacaggactgtagccaccagacggggtgcaccatcacagcct
agtgactcacctgaaccaaagaggcgcagatag

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