Artibeus jamaicensis (Jamaican fruit-eating bat): 119050168
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Entry
119050168 CDS
T07223
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119050168 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajm03400
]
119050168 (LIG4)
Enzymes [BR:
ajm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119050168 (LIG4)
DNA repair and recombination proteins [BR:
ajm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119050168 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
ATG17_like
Motif
Other DBs
NCBI-GeneID:
119050168
NCBI-ProteinID:
XP_037002235
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSKSVASHVPFADLCSTLERIQRSKGRADKIRYFREFLDSWRKFHDALHKNQNDV
TDSFYPAMRLILPQLEREREAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTHG
DAGDFAMIAYFVLKPRCLQKGQLTIQQVNDILDSIASNNSARRKDLVKKSFLHLISKCSA
LEQKWLIRMIVKDLKLGVSQQTVFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSPFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDKYEYFSRNGYKYTE
QFGASSQEGSLTPFIHNTFKTDIQICILDGEMMAYNPNTQTFMQKGNKFDIKRMVEYSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILNSIFIPIPGRIEIVQKTHAHTNKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKPPSDKKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKRALPSSILC
GTEKPEVYIEPCNSVLVQIKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHFFVGGDDGPQEKKRKAAPKMKKVIGIIEHLKAPNLSKINKVSNIFE
DVEFCVMSGISSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTESCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFTDTDLNQLKEVFTG
IKSLSEQTPEEMASVIADLEYRYSWDCSPLSMFRHHTIYLDLYTVINDLNSKVEGTRLAI
TALELRFHGAKVVPYLAQGVSHVIIGKDRSRVADFKAFRRTLKRKFKILQEGWVTDSIDK
CELQEENEYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacctcaaaaagtgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagataaaatcagatacttcagg
gaatttttagattcttggaggaaatttcatgacgcccttcataagaaccaaaatgatgtc
acagactctttttatccagcaatgagacttattcttcctcagctagaaagagagagagag
gcctatgggatcaaagaaactatgcttgctaagctttatatcgaattgctcaacttacct
agaggaggaaaggatgctcttaaacttctaaattacagaacacctactggaactcatgga
gatgctggagactttgcaatgattgcatactttgtgttgaaaccaagatgtttacagaaa
ggacaattaaccatacagcaagtaaatgacattttagattcaattgccagcaataattct
gccagaagaaaggacctagtaaagaagagttttcttcaccttataagtaagtgttcagca
cttgaacaaaaatggcttatacggatgattgtaaaggacttaaagcttggtgttagtcag
caaactgtattttctgtttttcataatgatgctgttgaattgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgatccttcagtaggactcagtgatatttctatc
actttattctctccctttaagccaatgttagccgcaatagcagatattgagcgaattgag
aaggacatgaaaaaccagagtttctacattgaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggtgataaatatgaatacttctcacgaaatgggtataaatatacagaa
cagtttggtgcttcttctcaggagggttctctcacaccattcattcataacacattcaaa
acagatatacaaatttgtatccttgatggtgagatgatggcctacaatcctaatacccaa
acttttatgcaaaagggaaataagtttgatattaagagaatggtagaatattctgatctg
caaacttgttactgtgtttttgatgtgttgatggtcaataataaaaagctaggacatgaa
accctgaaaaagagatatgaaattcttaatagtatttttataccaataccaggtagaata
gaaatagtgcagaaaacacacgctcatactaataaagaagtaattgatgctctgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacatcctctatccatttataagcca
gacaaaagaggtgaaggatggttaaaaattaagccagagtatgtaactggattgatggat
gaactggacatcataattgttgggggctactggggtaaaggttcacgtggtggaatgatg
tctcattttttgtgtgctgtagcagagaagcccccttctgataaaaaaccatcagtgttt
catacactttgtcgtgttggctcaggttacaccatgaaagaactatatgatctgggtttg
aagttggccaaacattggaaaccttttcataaaagagctctaccaagtagcattttatgt
ggaacagagaagccagaagtatacatcgaaccttgtaattctgtccttgtccagattaaa
gcaacagagattgttcccagtgacatgtataaaactggctgcactttgcgttttccgaga
attgagaagataagagaagacaaagagtggcatgaatgcatgactctggatgacttagaa
caacttcgagggaaagcatctggaaagcttgcatctaaacacttttttgttggtggtgat
gatggaccacaagaaaaaaagaggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacttaaaagcacctaacctttctaagataaacaaagtttccaatatatttgaa
gatgtggagttttgtgttatgagtggaataagtagccatccaaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacctactgcgtt
attgcagggtctgagaacataagagtgaaaaacataatttcttccaataaacatgatgtt
gtcaagcctgagtggctgctagaatgttttaagaccgaaagctgtgtgccatggcagcct
cgctttatgattcatatgtgcccatcaacaaaacagcattttgctcgtgaatatgattgt
tatggtgatagttatttcactgatacagatttgaaccaactgaaggaagtgttcacagga
attaaaagtcttagtgaacagactcctgaagaaatggcctctgtgattgctgatttagaa
tatcgatactcctgggactgctctcccctcagtatgtttcgacaccacaccatttatttg
gacttgtatactgttattaatgacttgaatagcaaagttgagggaacaagattagctatt
acagccttagagcttcgttttcatggagcgaaagtagttccttatttagctcaaggagta
tctcatgtaatcattgggaaggatcgtagtcgtgttgcagattttaaagcttttcgcaga
actcttaagagaaagtttaaaattctacaagaaggttgggtaactgattcaatagacaaa
tgtgagttacaggaagaaaatgaatatttggtttaa
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