KEGG   Acinonyx jubatus (cheetah): 106978680
Entry
106978680         CDS       T04657                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
aju  Acinonyx jubatus (cheetah)
Pathway
aju03018  RNA degradation
aju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106978680
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106978680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aju03019]
    106978680
   03041 Spliceosome [BR:aju03041]
    106978680
Messenger RNA biogenesis [BR:aju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106978680
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106978680
Spliceosome [BR:aju03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106978680
 Complex C
  U2 snRNP components
    106978680
SSDB
Motif
Pfam: LSM TIG_SUH vATP-synt_E DUF150_C
Other DBs
NCBI-GeneID: 106978680
NCBI-ProteinID: XP_014931874
UniProt: A0A6I9ZZ95
LinkDB
Position
A2:111273661..111283287
AA seq 102 aa
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcggacgacgtggaccagcaacaaaccaccaacaccgtagaggagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgaggaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattgggagatgtggaagagact
gtgactaccatagaaattgatgaggaaacctacgaggagatatataaatcaacaaaacgg
aatattccgatgctctttgtccggggagatggtgttgttctagttgcccctccattaaga
gttggctga

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