KEGG   PATHWAY: aka02010
Entry
aka02010                    Pathway                                
Name
ABC transporters - Advenella kashmirensis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
aka02010  ABC transporters
aka02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Advenella kashmirensis [GN:aka]
Gene
TKWG_01060  [KO:K01999]
TKWG_01065  [KO:K01997]
TKWG_01070  [KO:K01998]
TKWG_01075  [KO:K01995]
TKWG_01080  [KO:K01996]
TKWG_01145  [KO:K15553]
TKWG_01150  [KO:K15555] [EC:7.6.2.14]
TKWG_01180  [KO:K02020]
TKWG_01625  [KO:K02000] [EC:7.6.2.9]
TKWG_01630  [KO:K02001]
TKWG_01635  [KO:K02002]
TKWG_01640  [KO:K02002]
TKWG_01710  [KO:K16201]
TKWG_01715  [KO:K16200]
TKWG_02450  [KO:K02012]
TKWG_02470  [KO:K02010] [EC:7.2.2.7]
TKWG_02505  [KO:K10013]
TKWG_02510  [KO:K10016]
TKWG_02515  [KO:K10015]
TKWG_02600  [KO:K15554]
TKWG_02605  [KO:K15555] [EC:7.6.2.14]
TKWG_02610  [KO:K15553]
TKWG_03100  [KO:K02065]
TKWG_03105  [KO:K02066]
TKWG_03110  [KO:K02067]
TKWG_03130  [KO:K07323]
TKWG_03575  [KO:K06861] [EC:7.5.2.5]
TKWG_03810  [KO:K13889]
TKWG_03815  [KO:K13890]
TKWG_03820  [KO:K13891]
TKWG_03920  [KO:K02041] [EC:7.3.2.2]
TKWG_03925  [KO:K02044]
TKWG_03930  [KO:K02042]
TKWG_04100  [KO:K15553]
TKWG_04105  [KO:K15555] [EC:7.6.2.14]
TKWG_04110  [KO:K15554]
TKWG_04480  [KO:K09690]
TKWG_04485  [KO:K09691] [EC:7.5.2.14]
TKWG_04530  [KO:K01995]
TKWG_04535  [KO:K01997]
TKWG_04540  [KO:K01998]
TKWG_04545  [KO:K01999]
TKWG_05650  [KO:K10014]
TKWG_05655  [KO:K10016]
TKWG_05660  [KO:K10015]
TKWG_05665  [KO:K10017] [EC:7.4.2.1]
TKWG_05830  [KO:K09811]
TKWG_05835  [KO:K09812]
TKWG_05840  [KO:K09969]
TKWG_05845  [KO:K09970]
TKWG_05865  [KO:K09972] [EC:7.4.2.1]
TKWG_05975  glnH; glutamine ABC transporter periplasmic protein [KO:K10036]
TKWG_05980  glnP; glutamine ABC transporter permease protein [KO:K10037]
TKWG_05985  glnQ; glutamine ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
TKWG_06020  [KO:K15576]
TKWG_06235  [KO:K11720]
TKWG_06935  [KO:K10022]
TKWG_06940  [KO:K10024]
TKWG_06945  [KO:K10023]
TKWG_06990  [KO:K09815]
TKWG_07485  [KO:K01999]
TKWG_07530  [KO:K01999]
TKWG_07535  [KO:K01996]
TKWG_07550  [KO:K01998]
TKWG_07555  [KO:K01997]
TKWG_07560  [KO:K01999]
TKWG_08250  [KO:K12370]
TKWG_08255  [KO:K12371]
TKWG_08260  dppF; dipeptide transporter ATP-binding subunit [KO:K12372]
TKWG_08555  [KO:K02040]
TKWG_08560  [KO:K02037]
TKWG_08575  pstB; phosphate transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
TKWG_08670  [KO:K09815]
TKWG_08680  [KO:K09817] [EC:7.2.2.20]
TKWG_08685  [KO:K09816]
TKWG_08885  [KO:K01999]
TKWG_09615  [KO:K01999]
TKWG_09625  [KO:K01997]
TKWG_09640  [KO:K01996]
TKWG_10715  [KO:K01996]
TKWG_10720  [KO:K01995]
TKWG_10735  [KO:K01999]
TKWG_11200  [KO:K09808]
TKWG_11210  [KO:K09810] [EC:7.6.2.-]
TKWG_11360  [KO:K02011]
TKWG_11365  [KO:K02012]
TKWG_11395  [KO:K01999]
TKWG_11400  ugpC; glycerol-3-phosphate transporter ATP-binding subunit [KO:K05816] [EC:7.6.2.10]
TKWG_11405  [KO:K05815]
TKWG_11410  [KO:K05814]
TKWG_11430  [KO:K01997]
TKWG_11440  livM; leucine/isoleucine/valine transporter permease subunit [KO:K01998]
TKWG_11445  livG; leucine/isoleucine/valine transporter ATP-binding subunit [KO:K01995]
TKWG_11450  [KO:K01996]
TKWG_11870  [KO:K10441] [EC:7.5.2.7]
TKWG_12550  [KO:K01996]
TKWG_12555  [KO:K01995 K01998]
TKWG_12560  [KO:K01997]
TKWG_12565  [KO:K01999]
TKWG_12790  [KO:K11959]
TKWG_12795  [KO:K11960]
TKWG_12805  [KO:K11961]
TKWG_12810  [KO:K11962]
TKWG_12815  [KO:K11962]
TKWG_12820  [KO:K11963]
TKWG_14950  [KO:K01999]
TKWG_15225  [KO:K02471]
TKWG_15240  [KO:K23163]
TKWG_15245  [KO:K02046]
TKWG_15250  [KO:K02047]
TKWG_15505  [KO:K11074]
TKWG_15515  [KO:K11075]
TKWG_15530  [KO:K11073]
TKWG_16470  [KO:K24821]
TKWG_17390  [KO:K10001]
TKWG_17395  [KO:K10003]
TKWG_17400  [KO:K10002]
TKWG_17405  [KO:K10004] [EC:7.4.2.1]
TKWG_17535  [KO:K10004] [EC:7.4.2.1]
TKWG_17540  [KO:K10002]
TKWG_17545  [KO:K10003]
TKWG_17555  [KO:K10001]
TKWG_17585  [KO:K10013]
TKWG_17805  [KO:K02017] [EC:7.3.2.5]
TKWG_17815  [KO:K02018]
TKWG_17820  [KO:K02020]
TKWG_18015  [KO:K10112] [EC:7.5.2.-]
TKWG_18520  [KO:K01997]
TKWG_18525  [KO:K01998]
TKWG_18530  [KO:K01995]
TKWG_18535  [KO:K01996]
TKWG_18560  [KO:K01999]
TKWG_19120  [KO:K09969]
TKWG_19125  [KO:K10829] [EC:7.2.2.16]
TKWG_19135  [KO:K23227]
TKWG_19145  [KO:K23228]
TKWG_19470  [KO:K02001 K02002]
TKWG_19480  [KO:K02000] [EC:7.6.2.9]
TKWG_20500  [KO:K10112] [EC:7.5.2.-]
TKWG_21275  [KO:K15551]
TKWG_21280  [KO:K15552]
TKWG_22600  [KO:K10831] [EC:7.6.2.7]
TKWG_22605  [KO:K15551]
TKWG_22610  glnH; glutamine ABC transporter periplasmic protein [KO:K10036]
TKWG_23405  [KO:K09689] [EC:7.6.2.12]
TKWG_23410  [KO:K09688]
TKWG_23420  [KO:K10107]
TKWG_23945  [KO:K15553]
TKWG_23950  [KO:K15555] [EC:7.6.2.14]
TKWG_23960  [KO:K15554]
TKWG_24365  [KO:K01998]
TKWG_24370  [KO:K01997]
TKWG_24375  [KO:K01999]
TKWG_24385  [KO:K01996]
TKWG_24390  [KO:K01995]
TKWG_24630  [KO:K01996]
TKWG_24640  [KO:K01995]
TKWG_24645  [KO:K01998]
TKWG_24655  [KO:K01997]
TKWG_24660  [KO:K01999]
TKWG_24760  [KO:K02073]
TKWG_24765  [KO:K02072]
TKWG_24770  [KO:K02071]
TKWG_24930  [KO:K01999]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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