Acinetobacter larvae: BFG52_03050
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Entry
BFG52_03050 CDS
T04708
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ala
Acinetobacter larvae
Pathway
ala03030
DNA replication
ala03410
Base excision repair
ala03420
Nucleotide excision repair
ala03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFG52_03050 (ligA)
03410 Base excision repair
BFG52_03050 (ligA)
03420 Nucleotide excision repair
BFG52_03050 (ligA)
03430 Mismatch repair
BFG52_03050 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ala03032
]
BFG52_03050 (ligA)
03400 DNA repair and recombination proteins [BR:
ala03400
]
BFG52_03050 (ligA)
Enzymes [BR:
ala01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BFG52_03050 (ligA)
DNA replication proteins [BR:
ala03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BFG52_03050 (ligA)
DNA repair and recombination proteins [BR:
ala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BFG52_03050 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFG52_03050 (ligA)
MMR (mismatch excision repair)
DNA ligase
BFG52_03050 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BFG52_03050 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AOA57430
UniProt:
A0A1B2LWV9
LinkDB
All DBs
Position
687717..689756
Genome browser
AA seq
679 aa
AA seq
DB search
MDKSTIITQMRQLIQLIAQHNHAYYVMDQPEIEDSEYDQLFHQLKGLEQQYPDCVQADSP
ISKVGGQALSKFETVTHTVPMLSLGNVFDETELYAFARRIEERLAQQQIQYDVELKFDGL
AISLWYENGVLVRGVTRGDGETGELITQNVKTIRNLPKVLYADQQAVPELLEVRGEVLMP
KAGFLRLNAEQQAKGEKVFANPRNAAAGSLRQLDPEVAASRPLAFYAYGIAQCVPHHGLE
TMSESLDWLTGFGFAIGEKHFVCDSIAAVQQIYLEINQQRPDLSVEIDGMVIKVNNLQQQ
KQLGFLSREPRWATAYKFPAIAALTTVEQIDWQVGRTGTITPVARLEPVAVGGVTVSNVT
LHNIGEIHRLDVRIGDTVSVYRSGDVIPKVERVWTELRKPEQIYAPVQLPSHCPVCDSPV
VMPEGEALARCSGGLYCSAQRIEAIRHFVSRKAMDIEGLGDRWVESLLHLNLLDSVADIY
QLSEHREQMLQIDKMGEKSLQNLLDAIEQSKKTTLGSFIYALGIRGVGESTARMLANCFQ
SLDALKAADIDALKRTPDVGEITAEWIYDFFKAPHNIEILDRLIAAGIHWDAPLAPSRQP
LNGQSWVITGTLSQMSRDDATQALQALGARVSGSVSSKTKCLVAGEKAGSKLEKAQKLAI
DIMTEAEFIAFIASHNAGQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcgacaatcatcacgcaaatgcgtcagctgattcaactcattgcccagcat
aaccatgcctactatgttatggatcagcctgagattgaagacagtgaatatgatcaatta
ttccatcagttaaaaggcttagaacaacaatatcccgactgtgttcaagccgatagccca
atcagcaaagtgggtgggcaagcattaagtaagtttgaaaccgtgacccatacagtaccg
atgctgtcattgggcaatgtctttgatgaaacagaactctatgcttttgcacgtcgtatt
gaggagcgtttagcgcaacaacagattcaatatgatgttgagctcaagtttgatggttta
gcgatttccctctggtatgaaaatggcgtattggtccgtggtgtgacccgtggggatggt
gaaactggtgagttgattacgcaaaatgtcaaaaccatccgtaatttgcccaaagtcctt
tatgccgaccaacaggcggtaccggaattgttagaagtgcgtggtgaagtgctgatgccc
aaagccggctttttacggctcaatgcagagcaacaagccaaaggtgaaaaagtatttgcc
aatccccgcaatgctgcggcaggtagcctaagacagttagatccagaggttgctgcatct
cgtcctttggcattctatgcgtatggtattgcacaatgtgttccgcatcatgggctagaa
accatgtctgagagtttggactggttaactggttttggttttgccattggtgaaaaacat
tttgtgtgtgacagcattgcagcagtgcaacagatttatcttgagatcaatcaacagcgt
ccagatttatcggtggaaatcgatggtatggtgattaaagtcaataatttacaacaacaa
aaacaattgggctttttaagccgcgagccgcgttgggcgacagcttataaatttcctgcg
attgcagcattgaccacggtagaacagattgattggcaagttggacgtactggtaccatc
acaccggttgcacgcttagaaccggttgcggtcggtggggtaacggtatccaatgtaacc
ctgcataatattggtgaaattcatcgtttggatgtacgcattggcgacacagtgagtgtc
tatcgcagtggcgatgttattcccaaagttgaaagagtctggacagagctgagaaaacca
gagcaaatctatgcgccagtgcaattgccaagccattgcccagtctgtgactcgcccgtg
gttatgccagaaggcgaagctttagcacgttgttccggtggtttgtattgttcagcacaa
cgaatcgaagccatacgccattttgtttcgcgtaaagctatggatatcgaaggtttaggc
gatcgttgggtagagtctttgttgcatttaaacttgctcgatagtgtggcagatatttat
cagttgtctgaacatcgtgaacagatgctacaaattgacaagatgggtgagaagtcatta
cagaacttattggatgccattgagcagagtaaaaaaaccacactgggaagttttatttac
gctttgggcattcgcggtgttggtgaaagtacggcacgtatgcttgccaactgtttccaa
agtctggacgcattgaaagccgccgatattgatgctttaaaacgtacgcccgatgtggga
gagattaccgcggagtggatttatgatttctttaaagcaccgcataatattgaaatttta
gatcgtctcattgctgctgggattcattgggatgcaccgttggcaccatcacgacaacct
ttaaatggacaaagttgggtcattaccggcacactgagtcaaatgagtcgtgacgacgcc
acgcaagctttacaagctttgggggcacgtgtcagtggtagtgtatccagtaaaaccaaa
tgtctggttgcgggtgaaaaagccggctctaaattagaaaaagcacaaaaactagcgata
gacattatgacggaagcagaatttatcgcctttatcgccagccataatgccggtcaatag
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integrated database retrieval system
