Acanthopagrus latus (yellowfin seabream): 119004867
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Entry
119004867 CDS
T08233
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04620
Toll-like receptor signaling pathway
alat04621
NOD-like receptor signaling pathway
alat04622
RIG-I-like receptor signaling pathway
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119004867 (traf3)
04621 NOD-like receptor signaling pathway
119004867 (traf3)
04622 RIG-I-like receptor signaling pathway
119004867 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119004867 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
MctB
zf-TRAF_2
DUF4201
ATG16
bZIP_2
zf-C3HC4_4
zf-RING_UBOX
Crescentin
DUF724
GAS
zf-RING_6
KxDL
BLOC1_2
DUF1664
Snapin_Pallidin
Uso1_p115_C
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
119004867
NCBI-ProteinID:
XP_036928043
EnsemblRapid:
ENSALTG00010012873
LinkDB
All DBs
Position
16:108623..118791
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AA seq
591 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLATPLSVVPPSHRPTNPWPPSDCAASQGVPAGFLPLHG
GFRDHFVETPEGKYCCEACRLVLCQPRQTECGHRFCQSCISDILSRPNPVCPADNERLFK
DKIFRDICCQREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERMM
RKEIPDHLSWKCKHRETSCEFCMIKMPLTDLQKHKETVCPAFPVSCPNHCTFSSLPRSEL
SNHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTFAAEHLRMMANRNSSLENKVEDVK
GELLERYKLLPGLSGRVSELENQNDELREKNRQMEQKLATMQKLMSSHSEKLLEVELELR
SLRLLRDEVETLRGTLENVRTRLNALEQGGRSGTGSTTHTLASLETQLNRHDDMLSVHDI
RLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCAR
VYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLADAFKPDPN
SSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLLDP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgggcaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctggccacgcccctctcagtggtccctccctctcaccgcccaaccaatccctgg
cctccaagtgattgtgctgcttcacaaggtgtcccggcaggtttcctgcctcttcatgga
ggattcagagatcattttgtagagactccggaaggtaaatactgctgcgaggcctgcagg
ctggtcctgtgtcagccccgtcagactgagtgtggtcaccgcttctgtcagagctgcatc
agcgacatcctcagtcgtccaaacccggtatgtccagctgacaatgaacgtctgttcaaa
gacaagatcttcagagacatttgctgccagcgggagatcatggcgctgaaggtttactgt
cgcagtgaagctaacggctgtcaggagcagatgagtctgcagcagatacctgaccacctg
aatgtgtgtccgttctttgaggttccctgtccgttgggtaaatgtaaagagcgaatgatg
aggaaagagattccagatcacctgagctggaaatgtaaacacagagagaccagctgcgag
ttctgcatgatcaagatgcctttgactgacctacagaaacacaaagagacggtatgtcca
gcatttccagtgtcgtgtccaaaccactgcaccttctcctctctgccacgcagtgagctg
tcaaatcatcaacatgattgtcccaaagctcaggtgagctgtcagttccatcgatatggc
tgcaccttcaagggtctgaatcaggacatgaggcaacatgagtccaccttcgcagccgaa
catttgagaatgatggcaaaccgaaactcctcattagaaaacaaggtggaggatgttaaa
ggtgagctgttagagaggtataagttgcttcctggtctcagcggccgtgtttctgagctg
gagaaccagaatgatgagctgagagagaagaatcgacagatggagcagaaactggccacc
atgcagaaactgatgagttctcactcagagaagcttttggaggtggagctggagcttcgt
tctctccgtctgctcagagacgaggtggagaccctgagaggaacgctggagaatgtccgg
acacgactaaatgctctggaacaggggggacgcagcgggactggatccacaacacatact
ctggcttccctggagactcagctgaatcgccatgacgacatgttgagtgtccatgacatc
cgattggccgacatggacctgcgtttccaggtactggagacggcgagctacaatgggact
ctgatctggaagattcgtgattacaagagacggaaacaagaggcagtagcggcgaagaca
ctgtcgctgtactcgcagccattttacaccgggtacttcgggtacaagatgtgcgctcgt
gtctacctaaacggagacgggatgggcaaagggacacacctgtcgctgttctttgtggtg
atgaggggcgagtacgacgccctgctaccctggccctttaaacagaaggtgaccctgatg
ctgatggaccagggtccgtccaggaaacacctggctgatgcctttaagcccgacccgaac
agcagcagtttcagacgtcctgcagcagagatgaacatcgcctccggctgtcctctcttt
gtgtctcagagcgtcctggagacaggcagctacatcaaagacgacaccatcttcatcaag
gttacggtggatacgtctgacctcctcgacccatga
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