Acanthopagrus latus (yellowfin seabream): 119005728
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Entry
119005728 CDS
T08233
Symbol
pycard
Name
(RefSeq) apoptosis-associated speck-like protein containing a CARD
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119005728 (pycard)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119005728 (pycard)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119005728 (pycard)
Membrane trafficking [BR:
alat04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
119005728 (pycard)
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119005728 (pycard)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYRIN
CARD
FIIND
UPA-FIIND
Prophage_tailD1
Motif
Other DBs
NCBI-GeneID:
119005728
NCBI-ProteinID:
XP_036929493
LinkDB
All DBs
Position
17:complement(25399248..25420156)
Genome browser
AA seq
1291 aa
AA seq
DB search
MMAPPTIRTAIKNCLKDLTAGELEEFKDALIAEKGVPTSSVEGKNFLDVTRVIDTTFSDE
ALKVVIELLNDIGCKKKADALVAETKELTSKAGSSKSGTDSVTPKADGEHFVDRYREDLI
QRVNTIPQILDQLLTKKVIDQETYDKIRVMEPPQEQMREIYKSLNVARACKDIFYEILEE
KQKRLIDDLKKNEDTEPDTDIQTEEEKKTPAAGPSTVAPGVDTKSDSRCTGEHFVDKHQS
ELIKRVSDVEPILDELLCRNVIQQESYDEIKTLPTAEEKMRELISGPLKSSGVLGKDIFY
EILIENQPLLIQDLKSMDAEVETMSTLVSFDSAGREDRTDLVQRLTDTEEKHRPSLIQRV
ETMESVVEQLLETLKYLSDAELKKFQDILAPLSFHERYGSLLSFRAAAERNPLIMLGTTD
MKTIVLCMMQAYSQQTVEKTKEVLNEMERTDLVQQLSDSSFRPKQNFSMDRHMSALIHKA
ATMGAVKELLLETLNDLSYEEQKNFTWFLQFTFFKRSLPLILGKTIWWGQEDWVKVMVET
CGEESLEVIKQVFKDMNRIDLVQRLSESSSPPKGSSAEVFGVNTTEGEKQSLDEHWPALI
SKVEMMESVTELLLKTLKYLSDTELKEFIKVLRETDFHRNLDIPWSLVGRDRQQAVFTLM
LSHGRQSVEMIKDILEKMKRTDLVQRLSDNKDKMKHSAEEHRSALIHKVATIAAVKELLL
GTLNDLSDEELKNFKKFLQLTVFQKDLPDILWMLKYRADRADIVNQMVQTYGQQSVELTR
EVFMDMNRTDLLQRLSKPSSGLKEKHRPAASERAATKAAVKKILLKTLDNFSHKERMKFK
WLLQFTHFEKSLPQFSWRRVDWKDRTDRLVDQLVEACGQQSVEVTKEVLMDMNRTDLVKR
LSEASSGLKGPSRRLEHEGCGSTLQDSSDWTKLEPEVNSTDADEAPTYSLQSEAGNFECS
VSGLRWVCKEKVSFKYQFCSWEEPMERMKSMKYMLAGPLIDITVNAGKLDEVFLPHWICI
DDNPEIRDKFAVLHIDDCGDVVEKVAEVTSSHVKLSEPVFSPRAVLMKVGVPVRINCNVL
IYKTDTAFLTLHVYLIPCDPGLQQELNRRQFSSGYRAIQKPHPEKSLKMRDRFILTADLD
GAKIYPENLKLRYESRFPNFFEVYIKKPDTDFTLSLAQKNERQSVWTREIRKDEYQSTGH
KQVEHFVDKHQCDLIARVSNTGPILDNLLREGVIQQEDYDTIGTIPTTQERMRKLFSGPL
KAGGQAAKDVFFRILEEKESYLVADLKRKET
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcccccaaccatcagaacggcgataaagaactgtctgaaggacctgaccgcg
ggggaattggaggagttcaaggatgcgctgatagctgagaagggggtcccaaccagcagt
gtggagggaaaaaacttcctggatgtcacacgggttatagacacaacctttagtgacgaa
gctctcaaagtggttattgagctgctgaatgatattggctgcaagaaaaaagcagacgcc
ctcgttgcagagacgaaggaactgacctcaaaagctggttccagtaaatctggaacagac
agtgtgactcccaaggcagacggagagcactttgtggataggtacagagaagacctgatc
cagagggtgaataccattccacaaatcttggatcagctcctcaccaagaaagtcatcgac
caggagacttatgataaaatcagagttatggaaccccctcaggagcagatgagggagatc
tacaagtccctgaatgttgctcgagcctgcaaagacatcttctacgaaatccttgaggaa
aagcagaaacggctcattgatgacctcaagaaaaatgaagatactgaaccagataccgac
atacagacggaggaagagaaaaagacaccagcggcaggaccctcaactgtagcacctggt
gtagataccaagtcagacagtaggtgtacaggtgaacactttgtggataaacatcagtct
gagctgatcaagagagtaagcgatgttgaacccattttggatgagctcctctgccgaaat
gtcatccagcaagagagttatgatgaaatcaagactctgcccactgctgaggagaagatg
agggagctcatcagtgggccactgaaatccagtggagttctaggaaaagatatcttctat
gaaatcctgattgaaaatcagccactactgatacaagacctcaagagcatggatgctgaa
gtagaaacaatgtcaactttggtgtcatttgactcagctggtagagaggacaggactgat
ctggtgcagagactgacagacactgaagagaaacaccggccttcactgatccagagagtg
gaaacgatggagtctgttgtcgagcagcttttggaaacgctgaaatatttgagtgatgca
gagcttaagaagtttcaggatatactggctccactttccttccacgaacggtacggatcc
ttactgtcgttccgggcagcagcagagagaaacccactgataatgcttggaacaacagat
atgaagaccatagtgctttgtatgatgcaggcctacagccaacaaactgtggagaagacc
aaggaggttctaaatgagatggagaggactgacctggtgcagcagttgtcagacagcagc
tttagacccaaacaaaatttctccatggatagacacatgtctgcactgatccacaaagct
gcgacgatgggggctgttaaagagctgcttttggaaacactcaatgatctgagttatgag
gagcagaagaactttacgtggtttctgcagttcacattcttcaagaggagccttccactg
attctcggtaaaacaatttggtggggacaagaagactgggtgaaagttatggtcgagaca
tgcggtgaagagtctttggaggtgatcaagcaggttttcaaagacatgaacaggattgat
ctggtgcaaaggctgtcagagtccagctcaccacccaaaggatcatcagctgaagtgttt
ggtgtgaataccacagaaggagagaaacaatctttggatgaacactggcctgcactgatc
agtaaagtggaaatgatggagtctgtcacagagctgcttttgaaaacactgaaatatttg
agtgacacagagctaaaggagttcattaaggtcctgcgtgaaactgacttccacagaaat
ttagatatcccatggagtcttgtggggagagacagacagcaagcagtgtttacattaatg
ctgtcccatggccgacaatctgtggagatgatcaaggatattttagagaagatgaagagg
actgatctggtgcagaggttgtcggacaataaagacaaaatgaaacactctgcagaagaa
catcgctctgcactgatccacaaagttgcaacaatagcagctgtaaaggagctgcttttg
ggaaccctgaatgatttgagtgatgaggagctcaagaatttcaagaaatttctgcagttg
actgtcttccagaaggacctaccagatattttatggatgttgaaatacagagcagacaga
gcagatatagtgaatcagatggttcagacctacggccaacagtctgtggagttaaccagg
gaggttttcatggacatgaacaggactgatctgcttcagaggttgtcaaagcccagctca
ggactcaaagagaaacatcggcctgcagcatctgagagagcagcaacaaaggcagctgtt
aaaaagattctcttaaaaacacttgataatttcagtcacaaggagcgcatgaaatttaag
tggttgctgcagttcacacactttgagaagagcctccctcaattctcatggcgcagagtg
gactggaaggacaggacagaccgactggtggatcagttggtggaggcctgtggccagcag
tctgtggaggtgaccaaggaggttctcatggacatgaacaggaccgatctggtgaaaagg
ttgtcagaggccagctcagggctcaaagggccttcaaggagactggagcacgagggttgt
ggaagcactttgcaggactccagtgactggactaaacttgaacctgaagtgaacagtaca
gatgcagatgaggctccaacttacagccttcagtctgaggcaggaaactttgaatgcagt
gtctctggtttgcgctgggtctgtaaggagaaggtcagttttaagtaccagttttgctct
tgggaggaacctatggagaggatgaagagcatgaaatacatgcttgcaggtccccttatt
gacattacagtcaatgctgggaagctggatgaagtgttcctgccacactggatctgcata
gatgacaaccctgaaattagagacaagtttgcagtcctacacatcgatgactgtggagat
gttgtggaaaaagtggctgaggtcacatcgtcacatgtcaagttatcagaaccagttttt
tctccaagagcggtcctgatgaaagtcggtgttccagtgagaataaactgtaacgttttg
atttacaagaccgacacggcattcctgacgctccatgtttatctgatcccgtgtgatcct
ggactacaacaggaactgaacaggagacagttttcatctggatacagagcgatccaaaag
ccacatccagagaagtctctgaaaatgcgtgatcgcttcatcctcacagcagatttggat
ggtgcaaaaatttatcctgagaacttgaagctcagatatgaaagcagattcccaaatttc
ttcgaagtctacattaaaaagccagacacagacttcacgctcagcctcgcacagaaaaac
gagcgtcagtctgtatggacccgtgaaatcagaaaagatgaataccaaagcaccggccat
aaacaagtggagcactttgtggataaacaccagtgtgatctgatcgcaagagtgtccaat
acaggaccaatcttggataatctcctcagggaaggtgtaatccaacaagaagactatgat
accatcgggactatcccgaccactcaggagaggatgaggaaactcttcagcggccccctg
aaagctggaggtcaagcagccaaagacgtcttcttcagaatccttgaggagaaggagtca
tatctggtcgctgacctcaaaaggaaggagacataa
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