Acanthopagrus latus (yellowfin seabream): 119006345
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Entry
119006345 CDS
T08233
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03250
Viral life cycle - HIV-1
alat03260
Virion - Human immunodeficiency virus
alat04060
Cytokine-cytokine receptor interaction
alat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119006345 (cd4-1)
03260 Virion - Human immunodeficiency virus
119006345 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119006345 (cd4-1)
04514 Cell adhesion molecules
119006345 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
alat04090
]
119006345 (cd4-1)
CD molecules [BR:
alat04090
]
Proteins
119006345 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
I-set
C2-set
Big_13
V-set_CD47
Receptor_2B4
RIFIN
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
119006345
NCBI-ProteinID:
XP_036930891
LinkDB
All DBs
Position
17:20680628..20704422
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AA seq
472 aa
AA seq
DB search
MSNSILPALLLLSVFKSMTGADEVLYAQVGETVSLKPPQEYTPSVHYLYWYFGDLELAWR
NPHGGSGINDGQDMAKWKDKLSWSGNSLIIKEIPEEQFGTFTCKLPRDKLEKNYKLLKVQ
VSMNPASPLLPGDRLSLTCEADRPRSSKDEPKIQWLNPQGENVNNNSRHTVTATQQHNGE
WTCVVANDNKEKRSTITVTVVDLSPAPDHPLYTSKFQSLTIPCSIPSDVSWEQVKAKGVQ
GVHWDYLSLGSSHISGDPQRLFSLSLNDTLSWQPDKNRGLTPVSSLMKGNLSLFINKAKV
EDRGDYVCTMKFRSGLTLNRMVQVNVLQITSSPGTDLISGQQLNLTCSLGRPLSSDLQLK
LIPPKQSHLQPLTSDREPALLNIPEVGTGDGGRWKCELWQRGILLTFVEITLKIEPKLSV
WMLIIICSVTVIVLLVLVLVFILCHRRQRKMRHLRHRLCHCKNPKPKGFYRT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactcgattcttcccgcccttcttctcctctccgtgttcaagtcaatgacaggg
gccgatgaggtgctatatgcacaggtgggagagacagtttccctgaagcctccacaggaa
tacactccaagtgttcattatctgtactggtattttggtgaccttgaacttgcctggcgt
aacccccacggaggctcggggataaatgacggacaagacatggcaaagtggaaagataaa
ctgtcctggtctggcaactcactgataatcaaagaaatcccagaagaacaatttgggact
tttacatgtaaactgcctcgggacaagcttgaaaaaaactataaactactaaaggtccaa
gtgtctatgaacccggcctctcctctgctgcccggggaccgtctttctctgacctgtgag
gcggacaggcctcgcagttccaaagatgagccaaagatacaatggctgaatccccaagga
gagaacgtaaacaacaacagccgacacacagtgacagccacacaacaacataatggcgag
tggacctgtgttgtggcaaacgataataaagaaaagagatccacgatcacagttacggtt
gtggacctctccccagctcctgaccatcctctgtatacctctaaattccagtcactcacc
atcccctgttccattccctctgacgtctcctgggaacaagtcaaagctaagggcgtccag
ggagtgcactgggactaccttagcctgggctcgagtcacatttctggtgatccacagagg
cttttctccctctctctgaatgatacgctgagctggcagccagacaaaaaccgaggactg
actcctgtctctagccttatgaaaggaaatctgtcattgttcataaataaagcgaaggta
gaagacagaggcgactatgtttgcaccatgaaatttcgcagtggtctcactctgaacagg
atggtgcaagtgaacgtgctgcagatcacctcctccccaggaacagacttgatttctggc
cagcagctcaacctgacctgcagcctcggccgtccgctgtcttctgacctgcagctgaaa
ttgatcccaccaaaacaatcgcacctgcagcctctgacatctgaccgtgaacccgccctc
ctcaacatcccggaagtgggtacaggagatggcggaaggtggaagtgtgagctgtggcag
cgcggcatactgctgacgtttgttgagataactctgaagatcgaaccaaagctgagtgtg
tggatgctgataatcatatgcagcgtcacagtcatcgtgctcctcgtcctcgtcctcgtt
ttcatcctgtgccaccgcagacagcggaagatgagacacctcaggcatcgactctgccat
tgcaaaaaccccaagcccaaaggattctacagaacataa
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