Acanthopagrus latus (yellowfin seabream): 119006504
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Entry
119006504 CDS
T08233
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat00310
Lysine degradation
alat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119006504 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119006504 (setdb1b)
Enzymes [BR:
alat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
119006504 (setdb1b)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119006504 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119006504 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
THAP
Motif
Other DBs
NCBI-GeneID:
119006504
NCBI-ProteinID:
XP_036931156
LinkDB
All DBs
Position
17:19144183..19158318
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AA seq
1403 aa
AA seq
DB search
MVRTCVFPGCHNKQVPRSPYTFHRVPLIDIDLRQLWLAALNMDTSTPPARLRYLRVCSVH
FSEEDYVHPPPHKQLLNSTAVPRRQGCTSQSTTEEVNEEQQMFSGVLQSTPKEAPVKSHQ
ASTSASQLKLVVTSPEQPLPQERPSTSGAYLAFPPVRMEVDGWDPGLEEELGISLDELRK
WIEEAVEKSEIVQKKKAQLTELKQWVEQKEEEEAKTEKLLNDANQSILECEKLVKATYHR
NGLVYRESSSEDEAGGGGLLSSEVIEIDDDDDDDVIAVGCLVPPKKSVALGKDPVVKEAS
AAIQKTSQQVQKLVQMVSKPSPGAPLLRSPTQPPSQSGIQGSVPAVFVSQVPSQSMTQPN
PNVKEDELRVGMNILGKKRTKTWHRGTLVAISPVGNGVFKYKVKFDKGKSLLSGNHVAFD
YNPTLEILYVGARVVAKYKDGNLVWLYAGIVAEMPNNKNRMRFLIFFDDGYASYVTLPEL
FPVCRPLKRTWEDIEDASCRDFIEEYITAYPSRPMVLLKVGQIIKTEWEGTWWKSKVEEV
DGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKMTTANTAEKKLAGQQRTRPNMGALRSKG
PVVQYTSDGHVGASPVKTPQASPSQPSPTPQHPQHPQRPQTQQTPQPLQPLQPLQPLQPL
QPPQRVDNKHQMAKKSTSPFVPGVGGTHASKIMQSLPSSPSNLPSGRMLSAPNTPTFTQP
FQRPPLVTAPTPVTLPPAITHPMATIPHQPAYRAPTDRIFYLAHTCQPACLNRVRPANSD
LHRGKNPLLTPLLYDFRRMTGRRKVNRKMSFHVIYKAPCGLCLRNMAEIQHYLFQTRCDF
IFLEMFCLDPYVLVDRPFQPQRPFYYIHDITGGKEDIPLSCVNEIDSTPPPKVAYSKERI
PEDGVSINTSSDFLVGCECTDGCRDKSKCSCHQLTLQATGCTPGAQINPNAGYLHKRLEE
CLPTGIYECNKRCKCCSHMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIY
AGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRIKIQ
PSALVSSNPVGRPPKKGESNSKARSPSSSEDSNDDDDKDSKSEDESDSSDDTFVKDNYYT
SSSVWRSYTTRGQVKVNKEGSQDSKDGLSASAKGTDDEKPPSMPEETGKSKVASWLTSQG
LKKESGDCKTQVKSETGKKQDVMTLSDSDDVQTISSGSDDNKEKEKVTPGVTKKQVAVKS
TRGIALKGSHGMMVKSGAPGGGGGTGGHGGKTGQQVSTGGGGENVSKNTRLFFDGEESCY
IIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYE
VGSVEGKVLLCCCGSTECRGRLL
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcacttgtgtttttccgggctgccataacaaacaagtgcccaggtcaccctat
acatttcaccgtgtgccgttgattgatattgacctcagacagctgtggctagctgcactg
aatatggacaccagcacaccaccagcacggttgcgatatcttcgcgtttgcagtgttcat
ttttctgaagaggattatgtacatccaccgccacataaacaactgctgaatagcactgct
gtcccccgccgtcagggatgtacttctcaaagcacaacagaagaagtaaatgaagagcag
caaatgttttctggggtcctacaatccaccccaaaagaggctccagtaaagagccatcag
gcctccacatcagcatcacaactgaagcttgttgtaaccagccctgaacagcccctccct
caagaaagaccttcaacctcgggagcataccttgcctttcctcctgttagaatggaggtg
gatggctgggaccccggtctggaggaagagcttggcatttctctggacgagctgaggaag
tggattgaggaggctgtggagaagagcgagatcgtgcagaagaaaaaggcccagctgaca
gagctcaagcaatgggtggagcagaaagaagaagaagaggcaaagacagagaagcttctc
aatgatgccaaccagtccatactcgagtgtgagaaactggtgaaggcaacatatcacagg
aacggtctcgtttaccgtgagagcagctcagaggatgaagccggcggaggaggcttgctg
tcctctgaggtcattgagatagacgatgacgacgatgacgatgtcatcgctgttggctgt
ttggttcctccaaagaagtctgtcgctcttggcaaagatccagtggtaaaagaggcctct
gcagctatccagaaaacttcccagcaggtgcagaagttggtccaaatggtcagcaagcct
tcacctggtgctcctttgctacgatctccaacacagcctccatcccagtcaggtattcag
ggttcagtgccggcagtgtttgtatcccaagtcccatcacagtctatgacccagccaaac
ccaaacgtgaaagaagatgagctcagagtcgggatgaacattctgggaaagaaacgcacc
aagacctggcacagaggcaccctggttgctatcagtcctgtcggaaacggtgtattcaag
tataaagtgaagtttgataaaggaaagagtctgctgtctggaaatcacgtggctttcgat
tataacccgaccctggagattctttatgtcggggctcgtgtagtcgccaagtacaaggac
ggcaacctggtgtggctctacgctggaatagtagcagagatgcccaacaacaagaaccgt
atgaggtttttgatcttctttgatgatggctatgcttcatatgtgacattacctgagctc
ttcccagtttgtcgtccattaaagcgtacctgggaggacatagaggatgcatcgtgtcga
gacttcatcgaggagtacatcactgcctatcccagcaggcctatggtgctcctaaaggtt
ggacagatcatcaagacagagtgggagggaacctggtggaagagcaaagtggaggaggtg
gatggaagcttggtcaagatcctctttttggatgataaaaggagtgagtggatctacaga
ggctccaccaggctagagccaatgttcaacctgaagatgaccaccgccaacaccgcggag
aagaagctggctggacagcagaggacacgacctaacatgggagcattgaggagtaaaggt
ccagtagttcaatacaccagtgatggacatgttggagcatctcccgtcaaaacgccgcag
gcctcacctagtcagccttcaccaacaccacaacatccacaacatccacagcgtccacag
acccaacagacccctcagcccctgcagcccctgcagcctctgcagcctctgcagcccctg
cagcccccacagcgtgttgacaataaacatcagatggcgaagaagagtacttctccgttt
gtccctggggtgggaggcactcatgcttccaaaatcatgcagtctcttccctccagtccc
agcaacctcccgagtggaagaatgttgagtgccccaaatacacccactttcacacagccg
tttcagagaccgcctctggttaccgcccccactcccgtcaccctcccccctgctatcacc
cacccgatggccaccatcccacatcagcctgcttaccgtgccccgacggaccggatcttt
tacctggcacacacctgtcagcccgcctgtctgaatcgagtccggcctgcaaattcagac
ttgcaccgaggaaagaacccccttctcacacctttactgtacgatttcagacgcatgacg
ggaagacgcaaagtcaaccgcaagatgtccttccatgtgatctacaaggctccgtgtggg
ctttgcctgcgtaacatggcagaaatccagcactaccttttccagacgcgctgcgacttt
atattcttagagatgttctgcctggatccctacgtgcttgtggaccggcccttccagcca
cagaggccattctattacattcatgacatcactgggggaaaggaggacatcccactgtcc
tgcgtcaacgagatcgattccaccccgcctcctaaagtagcttacagtaaagaacgtatt
cctgaagatggagtatccatcaacaccagttcagacttcctggttgggtgtgaatgcact
gacggctgtcgagacaagtccaaatgctcttgccaccagctgacccttcaggctacaggt
tgtacaccaggggcacagatcaacccaaatgctggatatttacacaaacgattagaggag
tgcctccccacagggatctacgaatgtaataagcggtgcaaatgctgctctcacatgtgc
accaaccggctggtgcagcacggcttgcaggttcgtctccagctcttcaagacccagaac
aaaggctggggcatccgctgtctggatgacgtggccaagggctcttttgtctgcatctat
gctggtaaaatcctgacagatgactttgctgacaaagaaggtctagagatgggtgacgag
tatttcgctaacctggatcacatagagagtgtggagaacttcaaggagggctatgagagc
gaggctcactgttcagacagcgaggggagcggcgtggacgtctccaggataaaaatccaa
ccgtctgccttggtgtcttctaaccctgttgggcgaccgcctaagaagggtgagtccaac
tcaaaagcccgaagtccaagctcatctgaagacagcaatgatgacgatgacaaagattca
aagagcgaagatgaaagtgacagttcagacgacacttttgtgaaggacaactactacacg
tccagctccgtgtggaggagctacaccacacgtggtcaggtcaaggtcaacaaggaaggg
agtcaagacagtaaagatggattgagtgcatcagccaaaggaacagatgatgaaaagcca
ccgtccatgcctgaagagacggggaaaagcaaagtggcttcctggctaaccagccagggt
ctgaagaaggaatccggagactgcaagactcaagtgaaatcagaaacgggaaagaagcag
gatgtgatgactctgtctgacagtgatgatgttcagaccatcagctctggatctgatgac
aacaaggagaaagaaaaagtcaccccaggtgtgactaagaaacaagtggcagtgaaatca
actcgaggcatcgccctgaagggcagccatgggatgatggtaaaatcaggtgcacctgga
ggcgggggagggacgggaggccatggaggaaaaacaggacagcaggtgtcgactggagga
ggcggggaaaacgtttccaaaaacacccgcctgttctttgatggcgaggagtcctgctac
atcattgatgccaagttggaaggaaaccttggacgttacctcaatcacagctgtagtcca
aacctatttgtccagaatgtgtttgtggacacacatgacttacggtttccctgggtggcg
ttctttgccagcaagcgaatccgggccggcacagagctgacctgggactacaactatgag
gtaggcagtgtggaggggaaggtgctgctctgctgctgtggatccaccgagtgcagagga
agactgttgtga
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integrated database retrieval system
