Acanthopagrus latus (yellowfin seabream): 119008149
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Entry
119008149 CDS
T08233
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04020
Calcium signaling pathway
alat04510
Focal adhesion
alat04540
Gap junction
alat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119008149 (pdgfrb)
04020 Calcium signaling pathway
119008149 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119008149 (pdgfrb)
04540 Gap junction
119008149 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119008149 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
alat01001
]
119008149 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
alat04090
]
119008149 (pdgfrb)
Enzymes [BR:
alat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119008149 (pdgfrb)
Protein kinases [BR:
alat01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
119008149 (pdgfrb)
CD molecules [BR:
alat04090
]
Proteins
119008149 (pdgfrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
PKD
VEGFR-1-like_Ig-like
RIFIN
Haspin_kinase
Ig_VEGFR-1-like_5th
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
119008149
NCBI-ProteinID:
XP_036934138
LinkDB
All DBs
Position
18:complement(19455636..19493237)
Genome browser
AA seq
1103 aa
AA seq
DB search
MRRLMTSMLHLTFTVTALLYFCTESSCLEITPEDKELVLVEGSSLILTCSGSGETTWEFK
RDDVPYFQLEKVHDGSRSYQITQTSDTSVLTLWNVSWKHAGVYQCIDQGTRDVKEVAVFV
PDPNVWFLESSHGMVTKTSEESTIPCVVTNPDINVTLYERDTDLPIKGIYVPSEGYKAPL
EDRTYVCRGELNGEVKESQAFYVYSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGSEL
VFFSWDFPNREDDIEPLTDVLSAMNMRSCLIYPHATVAHSGNYVCHVNEPVQDQSASASV
SITVLERGFVDVKAAQKQNISAKLQENVELRVAIEAYPPPQVRWSKDGNTIKGDKTITTR
QEQEIRYVTILTLVRVRTEQKGLYTVLVSNGDDAKEVTFDLEVQVPAQIKDLTDHHLPGK
RHLVTCVAEGVPTPSIQWYSCDSMLKCSNQTAIWQPLIPEPEVLSVRTNVSFSETRKTSQ
VRSQVTFHKPQQVTVRCETSNKEGLVDRRDVKLVSSTLFSQVAVLAAVLALVAIIIMSII
ILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDHLVLGRTLGSGA
FGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKHGPLYLVTEYCRYGDLVDYLHRNKHTLLQYYAEKNQDDGCLISGGSTPLSQRKGYVS
FGSESDGGYMDMSKDEPSLYVPMQEQIDSIKYADIQPSPYESPYQQDIYQEQGGGRLDLV
ISDSTILTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
LFYSALKRGYRMAKPAHASDEVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLTESYKKRYS
QVNDNFLKSDHPAVARTKPRLSSPFPIANPAFGSPSPSSFSFPPDPYNQSPSPGEFRQEA
DSQEGITSYNEYIIPIPDPKPEEVFTNMPSESPASSLALEEETDSMSQDTAETLPEEDRL
EETSERDALLSSSGTPEVEDSFL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggttgatgacatcaatgctccatctgacattcacagttacagccctcctgtat
ttctgcactgagtcgagctgcctggagatcacacccgaggacaaagagctcgtcctggtc
gagggctcttctctcatcctcacctgctctggctcaggggagaccacctgggagtttaag
agggacgatgtgccttacttccaattggagaaggttcatgacggcagccgaagttaccaa
atcacgcaaactagcgacacaagtgttttgaccttgtggaacgtaagctggaagcatgcg
ggggtgtatcagtgcattgatcaaggcactagagatgttaaggaggtggcagtttttgtc
ccagaccccaatgtatggttcttagagagctcccacggcatggtaacaaagaccagtgag
gaaagcaccatcccctgtgtggtcactaatcccgacatcaatgtcaccctgtatgagagg
gacactgatctgcccatcaaaggaatttatgtccccagtgagggctacaaggcaccgctg
gaggataggacctacgtgtgtcgcggcgagctgaacggagaggttaaagagtctcaggcc
ttctacgtctacagcattgttgtcccagaggccatcgacgcctacatcaatgcgtcaaag
accgtcctgaagcagggtgaaccactgacagtaaactgcaccgtgcacggttcggagctg
gtgttcttttcctgggatttccccaacagagaggatgacatcgagccactgaccgacgtc
ctatctgccatgaatatgcgctcctgcctgatctaccctcatgccacagtggcccacagc
ggaaactacgtctgccatgtcaacgagcctgtccaagaccagtccgcctctgccagcgtc
agcatcactgtgctcgaacgaggctttgtggatgtgaaggctgctcagaaacaaaacatt
tcagccaagctccaagagaacgtggagctgagagtggcgattgaagcctaccctccccct
caggtccgctggagcaaagatggcaacaccatcaaaggagacaaaaccatcacaaccaga
caagagcaagagatcaggtatgtcactattctcaccttggtgagggtgaggacggagcag
aagggcctctacaccgtccttgtctccaatggagatgacgcaaaggaagtgacctttgac
ctggaagtccaagtccccgctcagattaaagacctgacggaccaccacctccctgggaag
agacacttggtgacctgtgtagccgagggggtccccaccccgtccatacagtggtacagc
tgtgacagcatgctcaagtgcagcaatcagacagcaatctggcagccgctgataccagaa
ccagaggtgctgagcgtccggaccaacgtcagcttcagtgagactcgtaaaaccagccag
gtgcgcagccaggtgaccttccacaagccccagcaggtcacagttcgctgtgagaccagc
aataaggaaggactcgtcgacagaagagacgtcaaactggtatcaagcactctgttctcc
caggtggcagtattggctgctgttctagccttagtggccatcatcatcatgtctatcatc
atcctcatcgctgtgtggcgcaagaaacctcgctatgagatcagatggaaggtgatagag
tctgtgagccaggacggtcatgagtacatctatgtggatcccatccacctgccgtacgac
ctggcctgggagatgccacgagaccacctggtgctgggtcgcactcttggatcaggagcc
tttggcagagtagttgaagcaactgcgtatggtctcactcattcccagtccagcacaaag
gtggccgtgaaaatgctgaaatctacagccaggaggagtgagactcaagctctgatgtct
gagttgaagatcatgagtcacctgggtcctcacctcaacatagtcaacttactgggagct
tgtaccaaacatgggcctctgtatctggtgaccgagtactgtcgctatggtgacctggtg
gactacctgcacaggaacaagcacacgctcctgcagtactatgctgagaagaaccaagac
gatggctgcctcatctcaggagggagcactccactcagccagagaaaaggctacgtgtca
tttggaagtgagagtgatggaggatacatggacatgagtaaggacgagccctcgctctac
gtgcccatgcaggagcagatagactccatcaagtatgcggacatccagccctctccgtac
gagtctccctatcagcaggacatctatcaggaacaaggtggcggcagattggacctggtc
atcagcgactctaccattctcacctatgatgatcttttgggcttcagctaccaagtggca
aaggggatggagttcctcgcctccaagaattgcgtccatcgtgaccttgctgccaggaat
gtgttgatctgcgagggcaaactggtgaagatctgtgacttcggcttggccagagacatc
atgcatgactccaactacatctctaaaggcagcacgttcctgcccctgaagtggatggca
ccagaaagcattttccataatttgtacaccaccctgagcgatgtgtggtcgtacggcatt
cttctctgggagattttcacactgggaggaaccccttatcctgatctgcccatgaatgag
ttgttctacagcgcattgaagagaggctaccgaatggccaagccagcccatgcctctgat
gaagtttacgaaatcatgaagaagtgctgggatgagaagtttgagaagaggcctgagttc
tcctttctggtccacagtgtggggaatatgctgacagagagctataaaaagagatacagc
caagtcaacgacaacttcctgaagagtgaccacccggcagttgcccgcaccaaacctcga
ctctcctcaccctttccgattgccaacccagcatttggctccccatccccatcctccttt
tccttccccccggacccctacaaccagagcccgagccccggagaattcagacaggaggcg
gactcacaggaaggcataacttcatacaacgaatacatcattcccatcccagaccccaag
ccggaggaagtgttcaccaatatgccgtcggaaagccctgcaagctctctggctctggag
gaggagactgactccatgtcgcaggacacggctgaaacccttccagaagaggacaggctg
gaggagaccagtgagagagacgctctgctcagctcctcaggaacgcccgaggtagaagac
agcttcctgtag
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