KEGG   Acanthopagrus latus (yellowfin seabream): 119009432
Entry
119009432         CDS       T08233                                 
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082  ATP-dependent chromatin remodeling
alat04145  Phagosome
alat04210  Apoptosis
alat04510  Focal adhesion
alat04520  Adherens junction
alat04530  Tight junction
alat04810  Regulation of actin cytoskeleton
alat04814  Motor proteins
alat04820  Cytoskeleton in muscle cells
alat05100  Bacterial invasion of epithelial cells
alat05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:alat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119009432 (actb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119009432 (actb1)
  09143 Cell growth and death
   04210 Apoptosis
    119009432 (actb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119009432 (actb1)
   04520 Adherens junction
    119009432 (actb1)
   04530 Tight junction
    119009432 (actb1)
  09142 Cell motility
   04814 Motor proteins
    119009432 (actb1)
   04820 Cytoskeleton in muscle cells
    119009432 (actb1)
   04810 Regulation of actin cytoskeleton
    119009432 (actb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119009432 (actb1)
   05100 Bacterial invasion of epithelial cells
    119009432 (actb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alat03021]
    119009432 (actb1)
   03019 Messenger RNA biogenesis [BR:alat03019]
    119009432 (actb1)
   03036 Chromosome and associated proteins [BR:alat03036]
    119009432 (actb1)
   03029 Mitochondrial biogenesis [BR:alat03029]
    119009432 (actb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:alat04812]
    119009432 (actb1)
   04147 Exosome [BR:alat04147]
    119009432 (actb1)
Transcription machinery [BR:alat03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119009432 (actb1)
Messenger RNA biogenesis [BR:alat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     119009432 (actb1)
Chromosome and associated proteins [BR:alat03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     119009432 (actb1)
    NuA4 complex
     119009432 (actb1)
  Chromatin remodeling factors
   BAF complex
    119009432 (actb1)
   PBAF complex
    119009432 (actb1)
   GBAF(ncBAF) complex
    119009432 (actb1)
   SWR1 complex
    119009432 (actb1)
Mitochondrial biogenesis [BR:alat03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    119009432 (actb1)
Cytoskeleton proteins [BR:alat04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     119009432 (actb1)
Exosome [BR:alat04147]
 Exosomal proteins
  Proteins found in most exosomes
   119009432 (actb1)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 119009432
NCBI-ProteinID: XP_036936632
LinkDB
Position
1:6547661..6551743
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgccctcgttgttgacaacggatctggtatgtgcaaagctggc
tttgcaggagatgatgctccacgtgctgtgttcccctccattgttggacgtcccaggcat
cagggtgtgatggttggtatgggccagaaggacagctatgtcggtgatgaggcacagagc
aaaaggggtatcctgaccctgaagtaccccatcgagcacggtatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggcccctgaggag
cacccagtcctgctcactgaggctcccctgaaccccaaggccaacagggaaaagatgacc
cagatcatgttcgagaccttcaacacccctgccatgtatgtggccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtattgtcatggactctggtgatggtgtgacc
cacaccgtgcccatctatgaaggctacgcccttccccacgccatcctcaggttggacctg
gctggcagggacctcacagactacctcatgaagatcctgactgagaggggttacagcttc
accactacagctgagcgtgagatcgtgcgtgacattaaggagaagctgtgttatgttgca
ctggacttcgagcaggaaatgggcactgctgcttcctcttcatccctggagaagagctac
gagctgcctgacggacaggtcatcactatcggaaatgagaggttccgttgccccgaggcc
ctcttccagccctctttccttggtatggagtcttgcggtatccatgaaactaccttcaac
agcatcatgaagtgtgatgtggacatccgtaaggacctgtatgccaacactgtcctgtct
ggaggcaccaccatgtaccctggcatcgctgaccgtatgcagaaggaaatcaccgccctg
gcacccactaccatgaagatcaagatcattgctcccccagagaggaagtactccgtatgg
atcggaggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtccggccccagcattgtccacaggaagtgcttctaa

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