Acanthopagrus latus (yellowfin seabream): 119009592
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Entry
119009592 CDS
T08233
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119009592
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119009592
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
119009592
NCBI-ProteinID:
XP_036936893
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Position
20:11338690..11352934
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AA seq
1262 aa
AA seq
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MRETIREGGGDGDTIVKSEKDQSWIPKIIKKRVCTTFVEDSFSNGALCQCGGARDAHASV
ALGDYFSTAMVNHWDSAQHSSEYPTDAFGEIQFAGASKRHSYFLRLSWDTPPSMVYTLIT
AHWGLPSPNLVVSVVGGEGRAKVKTWVREVLRQGLVKASQSTGAWIITTGLREGVGRCVG
EAVRDHATAASSVPLNKVVALGIAPWGLVHNRTQLVNSQGSFPAKYYVQNTSRDSCCLDN
NYQAFLLVDDGSEGRRGGETGFRAKLEDYISHQRTGIWGSGSIDIPVLCMLVSGEASMLE
RVDLSLKTSMPWLVLAGSGGLADFLSDLLENLSSAPAAQSSGEGDGEAGPSVDLKDRVAE
RVRKHFPSEAESDKLVEQALSIYQNRGFITIYHGEQEGPNDFDTVLLKALVGASKQRTSV
DASPYNEELKLAVTWNRVDIAKSELFNGDIQWRYDDLEDSMTDALVNDKPQFVRLFTENG
LNILDYLTYGRLESLYRSVADGTMLYQLLQRRLVERLGTVVTVPTSSNMPESPSKVAAEN
MHSGPVTDITLFEVAGVLELLMGDVCQPFYYDALGLEKISSKRRALRRASKLLRGDCFYR
RERCLFPWASLFIWAVLQNRSEMATFFWEMAGESVLSALSGCKILRELSKLEVETETKLS
MKELAQRFETVAHDVFSSCYQSNEGRSFTLLIRKSPVWGGTTCLQMGMGADARLFFSHDG
VQSLLSQIWWGDMERNTEVWKLLLTFFCPVLCYTNLISFRKQEDHQQEEEGKPNEDAPGR
DNDSLYGATIFSFSDIKHIEADSQGLSTPRTATIRGVPHSRRPPKRPFVVSRWRQFWFAP
VTAFLGNVLMYFLFLLLFAYVLLVDFKPPPPKGPAITEYVLYFWVFTIVCEEIRETFFLG
TMNWRQRIRVYIQDVWNKCDLTAIILFIIGLICRMFNWSYGFGRDILCVDYMVFTLRLIH
IFAIHRQLGPKIIIVGKMMKDVFFFLFFLGVWLMAYGVANQALLYSYDPRLDRIFRRVFY
RPYLHIFGQIPVEEMDVGKQWDMPCTDNITRIDSGEEPCRVLYSNWLVVILLVVYLLVTN
ILLINLLIAMFSHTFTEVQANSDIYWKFQRYNLIVQYHSRPSLAPPFIILSHINLFIKRT
IRKVPSVKIHHFVLQLKGKAANRLMTWETIQKEDFLTAQNKIQKSSDSERLKRMSVKMDG
MVKHLTESRDFDHRLRALESEMEYCSNALSWIVDTLAQGSTFKPPRPPPTLRDAFPSSSN
SS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacaataagagaaggaggaggagacggagacacaatcgttaaatctgagaaa
gaccagagctggatccccaaaatcatcaagaagagagtgtgcaccaccttcgtagaagat
tccttcagcaatggcgcgctatgccagtgtgggggtgccagagatgcccatgcctccgtg
gctctcggggattatttcagcacagcgatggtcaaccactgggacagcgcccagcactcg
tctgaatacccaacggatgcctttggagagatacagtttgctggagccagcaagaggcat
agctatttcctgcgtctgtcatgggatacgcctccgtctatggtctacaccctgattaca
gcccactggggtcttccctcgcccaacctggtggtttctgtagtgggcggagaaggcagg
gcaaaggtgaagacctgggtgcgggaggtcctcagacagggactagtgaaagcctcacaa
agcacaggagcgtggatcataacgacaggcctgcgcgaaggtgtcggcaggtgtgtcgga
gaagcagtgagggatcatgccactgcagcctcgtcggtccccctcaacaaagtggtggcg
ctgggcattgctccgtggggacttgtgcacaaccgaacgcagctggtcaactctcagggc
agctttcctgctaagtactatgtccagaacacgtcgcgggactcctgctgcctcgacaac
aactaccaggccttcctgctggtggacgatggtagtgaggggcgcagaggaggagagacc
gggttcagggccaaactggaggactacatctcccaccagcgcacgggcatctggggcagc
ggcagcattgacatccctgtcctttgtatgctggtgtcaggggaggcgagcatgctggag
agagttgatctctctctgaaaacctccatgccctggctggtgctggccggctcaggaggc
cttgctgacttcttgagcgatctcttggagaacctgtcctcggcccctgctgcccagtcc
tccggcgagggcgatggcgaggcaggccccagcgtggatctgaaagacagagtggcagaa
cgggttagaaagcacttcccttctgaagcagagtcggataaactagttgaacaggctctg
agcatctaccaaaacagaggcttcattacaatttaccacggagagcaggagggcccaaat
gattttgacacagtcctgctcaaagcgttggtgggagctagtaagcagcgtacctcggtt
gatgccagcccttacaatgaggagttaaagctggcggtgacgtggaacagggttgacatc
gccaagagtgaactcttcaatggagacatccagtggaggtatgacgatctggaagactcc
atgacagacgccctggtcaacgacaagcctcagtttgtgcgtcttttcactgagaacggc
ctcaacatcctggactacctgacttacggcaggctggagagcctgtaccgctcagtggct
gatgggacgatgctttaccagctacttcagcgccgtctggtggagcggctaggaactgtg
gtcactgtccccacgtcatcaaacatgccagagtcgccttccaaagtggcagcagagaac
atgcacagtggcccggtgacagatatcaccctttttgaggttgcaggagtcctggagctg
ttaatgggcgatgtctgccagccattttactatgatgctttgggcttagagaagatctca
tccaagaggagagctctgaggcgtgccagtaagctgctgcgtggtgactgcttttatcgg
agagagcgctgcctcttcccctgggcttctctcttcatctgggccgtcctacagaaccgc
agcgagatggccactttcttctgggagatggcaggagagtcagtgctgagtgctctgagt
ggctgcaagatactgagggagctgtccaagctggaggttgagactgagaccaaactgtcc
atgaaggagttggctcagaggtttgagacggtggcacatgacgtgttcagctcctgctat
cagagcaacgagggtcgctctttcacgctgctgatcaggaaatctccagtttggggtggc
accacctgcctgcagatgggcatgggtgctgacgcccggctgttcttcagtcatgatgga
gtacagtctctgttgtcccagatttggtggggtgacatggagagaaacacggaggtgtgg
aagctcctgctcaccttcttctgccccgtcctctgctataccaaccttatctctttcagg
aaacaagaggaccatcagcaagaggaggaggggaagcccaacgaggacgcaccaggcagg
gacaacgacagcctttacggcgccaccatcttctctttctcagacatcaagcacattgaa
gctgattcacaaggcttaagcactcccaggacagcgaccatcagaggcgtaccccactct
cgcagaccgccaaagcgtccgtttgtagtgtcaagatggcggcagttctggtttgcgccc
gtcaccgcatttttggggaacgtcctcatgtacttcctcttcctcctgctgtttgcctat
gtgctcttggtggacttcaagcctccgccgcccaagggtccagccatcactgagtatgtg
ctctacttctgggtattcaccattgtgtgcgaggagatcagggagacgttctttttgggg
acgatgaattggcgtcagaggatcagagtgtacattcaggatgtttggaacaagtgcgac
ctcactgccatcattctgttcatcataggactgatctgcaggatgttcaactggtcgtat
ggatttggccgggacatcctgtgcgtggactacatggtcttcaccctccgtctcattcac
atatttgccattcacagacagttgggaccgaaaatcatcattgttggcaagatgatgaag
gatgtcttcttcttcctcttcttcctgggggtgtggctcatggcctatggagtagccaac
caggccctgctttactcctatgaccctcgcctggatcgcatcttccggcgggttttctac
cggccgtacctacacatcttcggacagatccctgtggaagagatggatgtggggaagcag
tgggacatgccgtgcacggacaacatcacgaggattgacagtggtgaggagccgtgcaga
gttctgtacagtaactggctagttgtaatcctgctggttgtttatctgctggtcaccaac
atcctgctcatcaacctgctcatcgccatgtttagtcacaccttcactgaagtgcaggcc
aacagcgacatctactggaagttccagcgctataacctgattgttcagtaccactcccgt
ccttccctggctcctcctttcatcatcctctctcacataaatctgttcatcaagaggacc
atccggaaagtgccttctgtcaagatccaccactttgtgttgcagttgaaagggaaagca
gctaacaggctaatgacgtgggaaaccatccagaaggaggacttcctgactgcccagaac
aagatccagaaaagcagcgactcagagaggctcaagcggatgtctgtcaagatggatggt
atggttaaacatctgactgagagcagagactttgatcacaggctgagggctttggagagt
gagatggagtattgctcgaatgctctcagctggattgtggatactttggcacaaggaagc
acgttcaaaccgcctcgacctccacctacattaagagatgccttcccctcttcttccaat
tcttcctga
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