Acanthopagrus latus (yellowfin seabream): 119009731
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Entry
119009731 CDS
T08233
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119009731 (scn4aa)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119009731 (scn4aa)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
SieB
Motif
Other DBs
NCBI-GeneID:
119009731
NCBI-ProteinID:
XP_036937163
LinkDB
All DBs
Position
20:complement(20792379..20820452)
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AA seq
1902 aa
AA seq
DB search
MATLLPPPGTDVFRRFTQESLVEIERLKEESKKAAEVAGQEDEEPLAPHADLEAGKSLPL
IYGDPPPELLNTPLEDLDPFYKAQSTFIVITKGNTIFRFNAEPACYILSPFSVIRRGAIK
ILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGSF
TFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQS
VKKMVDVMILTVFALAVFALVGLQLFMGNLRQKCIRWPINTNETAFEFFNTTSTFNDTVY
FNNTMGLNDTTYNSTFNFIEYIENTDNHYYLEGSPDALLCGNSSDAGKCPEGYTCMKAGR
NPNFGYTSFDSFGWSFLALFRLMTQDYWENLFQLILRAAGKTYMLFFVVIIFLGSFYLIN
LILAVVAMAYDEQNEATQREALEKEEEFQRLLAQLKDQEQALLLGSRATLTSKKTLSHHT
TSEMADDERSLEHDEIIKDCNGRLIPRLLVRAPTMVKSAEDYELKEKSVGSVHSMLRLEE
PGLTHRTASIATVLTAAAMEELEEGQRPCPPGWYKFADIFLKWNCCPQWVVFKKWMYFVV
MDPFVDLTITICIVLNTLFMAMEHYPMTPEFDNMLSVGNLVFTGIFTAEMFFKLIAMDPY
YYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKIASSCELPRWHMNDFFHSFLIVF
RILCGEWIETMWDCMEVAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAGDE
DGEMNNLQIAIGRITRGIDWFKAFLIQTVLQFLGRKPKEPEEDLTNDDDPKTEEIEMNHL
DSSQDLKMADGIANCLVEGRPSGFIVDGEHSLNVPIALGESDFENLGEDDDDEDDEDDAD
NADDSETTDEKNNQQYSEKVDDEISVPENAKLMGALNDGDSSVCSTADYQPPEPEPEEVE
EEEPDPVEPEDCFTESCVRRWPCLTVDITQGRGKKWWNLRRACFTIVEHDWFETFIIFMI
LLSSGALAFEDINIERRRTIKIILEYADKVFTYIFVVEMILKWVAYGFKTYFTNAWCWLD
FFIVDVSLVSLVANWMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIF
NVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPMNEVNNHSECMALKEATQEARW
VNVKVNYDNVGSGYLSLLQIATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKFGDKDIFMTEEQKKYYDAMKKLGSKKPQKPIPRPTN
LIQGMVFDFISQQFFDIFIMVLICLNMVTMMVETDNQSPEKEDFLFKVNVAFIVVFTGEC
VLKLFALRQYFFTNGWNVFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDIFNFE
TFGGSIICLFEITTSAGWDGLLLPMLNKEYPDCDPDFENPGTDVKGNCGNPGMSMIFFCS
YIIISFLVVVNMYIAIILENFNVAQEESGDALCEDDFEMFNETWEKFDLDGTQFIEYNRL
SDFCDALQEPLRVAKPNRLRLIEMDMPLVIGDRIHCLDVLLAVTQMVLGDTVEMAAMRES
IEAKFILSNPTSDSFAPITTTMRRKEEQLAAVVIQRAYRNHLLKRCIHHAAFMHRSKRMG
RKDDSEDPPEKEGMLARRMGVLYGSNVDLADEMERAALETLAGQQLPDPETLSYYSEPDC
GTEYPEPNIMVVPVEITNEVLLHSAPNQYLLALHANLRESIV
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgctccctcccccaggcaccgatgtgttccgtcggttcacccaggaatca
ctggtggagatcgagaggctcaaggaggaaagtaaaaaggctgcagaagtagcgggccaa
gaggacgaagagccattggccccacacgctgacctggaggcaggcaagagtctgcccttg
atctatggagatcctccaccagagctgctcaacacacctctggaggacctggaccccttc
tacaaagcacagagtacattcattgtgatcaccaaaggaaacaccatcttcaggttcaat
gctgaaccggcttgctacattctgagcccctttagtgtgattaggagaggagccatcaaa
attctcatacattcattatttagcatgttcatcatgattacaattctatcgaattgtgtc
ttcatgacgatgagcaatccaccagcatggagtaaaactgttgagtatgtttttaccggt
atctatacctttgaggcaacagtcaaagtgttgtcgagaggtttctgtgttggatctttt
acattccttcgagacccatggaattggctagatttcatggtgatcagcatggcatacatc
actgagtttgttgaccttggcaatgtgtcagccctcaggacatttcgtgtgcttcgagcc
ctgaaaacaatcactgtgattcctggtttgaaaaccattgtgggcgctttgatccagtca
gtgaagaaaatggtggatgtcatgatcctgactgtcttcgctctcgctgtttttgccctc
gttggccttcaactttttatgggaaatctgcgtcagaaatgtatacgatggcccatcaac
acaaatgaaactgcatttgaattctttaacaccaccagcacatttaatgacacagtgtac
ttcaacaacaccatggggctcaatgacacaacatataacagtaccttcaatttcatcgaa
tatattgaaaacacagacaatcactattatttggaaggcagtccagacgctctactttgt
ggaaacagctccgatgctgggaagtgcccagaaggatacacctgcatgaaggctgggagg
aacccaaactttggctacaccagttttgactcttttggctggtccttcctggccctcttc
agactcatgacccaggactactgggagaaccttttccagctgatcctgcgggcagctggt
aaaacatatatgctgttctttgtggtgatcatctttctgggctccttctacctcatcaac
ctcatcctggctgtagtagccatggcttatgatgaacagaatgaggcaacgcagcgagag
gcacttgagaaagaagaagagtttcagcggctattagcacaactcaaggatcaggaacag
gcccttcttcttgggagtcgagcaactctgacaagtaagaagacacttagtcatcacacc
acatctgagatggcagatgacgaacggagcctcgaacatgatgaaattatcaaggattgt
aatgggagactcattccccgtctgttagtcagagcgcccaccatggttaagtctgctgaa
gattatgaactcaaagagaagtcggttggctctgtgcacagcatgcttcgactggaagaa
ccgggcttgacacacagaactgcgagtattgcgactgtgctcactgcagccgctatggaa
gagttggaggagggtcaaaggccgtgcccacctggatggtacaagtttgccgacatattc
ctgaagtggaactgctgcccgcaatgggtggtctttaagaagtggatgtactttgtggtg
atggacccttttgtcgacctgacgatcaccatctgcatcgtgctcaacaccctcttcatg
gccatggagcactacccaatgaccccagagtttgataacatgctctcagtggggaatctg
gtgttcactggtatcttcacagcagaaatgttcttcaagcttatcgccatggatccctac
tactactttcaagttggctggaacattttcgacagcatcatcgtcactctcagtctggtg
gagttggggctggcaaatgtccaggggttgtctgtcctcaggtccttccgtctgcttcgt
gtcttcaaactagccaagtcctggccaactctcaacatgctgatcaagattatcggtaac
tcagttggagctttaggaaacctgacgttggtgctggccatcatcgtcttcatcttcgcc
gtggttggtatgcagctcttcggcaagaactataaggactgtgtgtgcaagatcgcctca
agctgtgagctgccacgctggcacatgaacgacttcttccattcgttcctcattgtgttc
cgtatcctgtgtggggagtggatcgagaccatgtgggactgcatggaggtggctggagct
gggatgtgtttagttgtcttcatgatggtaatggtcatcggaaatctagtggtgttgaac
ctcttcctggccttgttgctcagctcgttcagtggcgacaacctttcagcaggggacgaa
gatggagagatgaacaatctccagattgccattggcaggatcacacgagggatcgactgg
tttaaagcgtttctcattcaaacagtcttgcagtttcttggcagaaagcccaaagagcct
gaggaggacctgacaaatgacgacgaccctaaaacggaggaaattgaaatgaaccacttg
gactccagtcaggacctcaaaatggcagatgggatagctaattgtttggttgaaggcagg
ccttctggatttattgtggatggagagcacagtctcaatgtgcccatcgccctgggagag
tcagactttgaaaacctgggcgaagatgacgatgatgaagacgatgaagatgatgctgat
aatgctgatgactcagagacaacagatgagaaaaataaccaacagtactcagaaaaagta
gacgatgaaattagcgtacctgaaaatgctaaactgatgggtgctttgaatgatggggat
tcttcagtgtgtagcacagctgactatcaaccacctgagcctgaaccagaagaagtagaa
gaagaagagccagacccagtggagccagaggactgcttcaccgaaagctgtgtgaggcgc
tggccttgtctgaccgtggacatcactcaaggtagaggcaagaaatggtggaacctccgt
agggcctgcttcactatagtggagcatgactggtttgaaaccttcataatctttatgatc
ctcctcagcagtggcgctctggcctttgaagacataaacatagaaagacgccgaaccatc
aaaattattctggagtatgctgacaaagttttcacctacatctttgtcgtggagatgatc
cttaaatgggttgcatatggcttcaagacctacttcaccaacgcttggtgctggttagac
ttcttcattgtagatgtttcactggttagtttagtcgccaactggatgggctactccgac
cttggaccaatcaaatccctcagaactctcagggcgctaaggcctcttcgagcactgtcg
agatttgaagggatgagggtggtggtgaacgctcttgtcggagcaattccctccatcttc
aacgtgctgttggtgtgtctgatcttctggttgatattcagcatcatgggagttaacctg
tttgctgggaagttctaccgctgcatcaacaccaccacagaggagcttttccctatgaat
gaggtcaacaaccatagcgaatgcatggccctcaaagaagccacgcaggaggcccgctgg
gtcaacgtcaaagtcaactatgacaacgtgggatcgggctacctgtccctgcttcaaatt
gcaactttcaaaggctggatggacatcatgtatgctgccgttgactcaagagaggtagag
gagcaaccttcttatgagatcaacctctacatgtacatatacttcgtcatctttatcatc
ttcggctccttcttcacactcaacctcttcattggcgtcattattgacaatttcaaccaa
cagaagaaaaagtttggagataaagacatcttcatgacagaggaacagaaaaagtactac
gatgccatgaagaaacttggttccaagaagccacagaagccaattccacgtccaaccaac
ctaatccaaggaatggtgtttgacttcatcagtcagcagttctttgacatcttcatcatg
gtgctcatctgcctcaatatggtgaccatgatggtggagacggacaaccaaagtccagag
aaggaagatttcctcttcaaagtaaacgtggccttcattgtcgtcttcactggagagtgt
gtgttgaagctttttgccctgcgacagtacttcttcaccaacgggtggaacgtttttgat
tttgttgtggtcatcttgtccatagctggtacgatgctctcagatataattgagaagtac
tttgtctcaccaaccctgttcagagtgatcagactggccagaataggcaggattctacgt
cttattaaaggagcgaagggcatccgaacacttctctttgctctgatgatgtcacttcct
gccctattcaatattggcctcctgctcttcctcattatgttcatcttctccatatttggc
atgtcaaactttgcctatgtcaaaaagcaagctggaatagatgacatatttaattttgag
acatttggtggcagcatcatctgtttgttcgagatcacaacgtccgctggttgggatggg
cttttacttccaatgctgaacaaggagtatccagactgcgatccagactttgagaaccca
ggcacggatgtcaagggtaactgcggcaacccgggcatgagcatgatcttcttctgcagc
tacatcatcatctcattcttggtggtggtcaacatgtatatcgccatcatcttggagaac
ttcaatgtggcgcaggaggagagcggtgacgcactctgtgaggatgactttgagatgttc
aatgagacttgggagaagtttgacttggatggaactcagtttattgagtataaccggctc
tcagatttttgtgatgccttgcaggagccgctgagggtcgcaaagcctaaccggcttcgc
ctgattgaaatggatatgcccctggtaataggggacaggatccactgcctggacgtctta
ttagccgtcacacagatggtcttaggagacacggtggagatggctgcaatgcgggagagc
attgaggccaagttcatcctgagcaaccccacctcagactcctttgcaccgattaccaca
acgatgcgccgcaaagaggaacagttggctgctgtagtcattcagagggcgtaccgcaac
cacctgctgaaacgctgcatacaccacgctgctttcatgcaccgctctaagaggatgggt
agaaaggatgatagtgaagatccaccagaaaaagaggggatgcttgcacgcaggatggga
gtgctctatgggagcaatgtggaccttgcggatgagatggagcgggctgctttagaaact
ctggcaggccaacagcttcctgatccagagacactgtcatattactcagagcctgactgt
ggtacagaatacccagagccaaatatcatggttgtacctgtagaaattactaatgaggtg
ttattacattctgcccctaaccaatacctcttggcactacacgcaaacctgagagagtca
attgtataa
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