Acanthopagrus latus (yellowfin seabream): 119009908
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Entry
119009908 CDS
T08233
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03440
Homologous recombination
alat03460
Fanconi anemia pathway
alat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119009908
09124 Replication and repair
03440 Homologous recombination
119009908
03460 Fanconi anemia pathway
119009908
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119009908
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119009908
03036 Chromosome and associated proteins [BR:
alat03036
]
119009908
03400 DNA repair and recombination proteins [BR:
alat03400
]
119009908
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119009908
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119009908
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119009908
Multi subunit type E3
BRCC complex
119009908
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119009908
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119009908
BRCA1-A complex
119009908
BRCA1-B complex
119009908
BRCA1-C complex
119009908
BRCA complex
119009908
FA (Fanconi anemia) pathway
Downstream FA components
119009908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
BRCT_2
zf-Nse
RTT107_BRCT_5
zf-RING_5
zf-MIZ
PTCB-BRCT
zf-RING_4
zf-RING_10
TRAF3_RING
zf-ANAPC11
zf-rbx1
RING_ZNF598
Motif
Other DBs
NCBI-GeneID:
119009908
NCBI-ProteinID:
XP_036937531
LinkDB
All DBs
Position
20:13754496..13782234
Genome browser
AA seq
1461 aa
AA seq
DB search
MKTPIATDVKKGISVLWETLQCPICLDLMETPVSTKCDHQFCKFCMMKLLDNTKQNRANC
PVCKAKITKRSLQESPGFQRLVAGLQDMIQAYEHDTGTNFVTGLAQQEQQSGVIDAEATK
HCDEMSSGDKPCSDRDNFENVDDDDLPKSCSSTVAAQNGFARLMELEDTSPLTTENEGLD
SGLGEAPPTSDKKMHSSTDNLKPLETETSDIVEKATSTRKTREKMRVSELEESSLHPLLI
PDETEHPPLRKSSRKKRKKDSEPDKILDQKQKKSLEKVAEWLMKVPTEGSLELEKPDDDT
DDSDSCSSDSTIDVRQHNSDVYHKRENHAKALEEQVFGAVYKRGRRMNRSTSPGNVFVKP
LKTKVRTTPDFSMKTTSDDKSDSDIEEEQQMTEEVKDTSSDILKEAEEMAVMEENDVDKY
EEDLTNFTESDKNNDKEEVPCPVSDIGQPERKSMKRTRNTQQQVDSDLLEQTKSESTEQK
KVDKRKGKNTKSEKCKPARVTKPLVLVEVQNGETSPKTRPRSEEVQVHIENYPSSEDQDI
HVTRITRRSRRLQVFTEEVQEDHKKANLKTPKVPKKVSKVAEQSKGTKGGTVVNTASPTN
KNMTKAPERNGCIYDQDLGGIENVESGEKTPFMGPQDNANESIAEVPNPETLSKASPACY
VPAVPSSISPAEAAAVDPTFESHSPNHIQLDNSACETECAGIENEEDKNDSELDTEQLLR
SFKATKRKSFHLGGPNVKRSRSSDQENFQCTELGKNRLHTKLSEITNKEALRDHENLSGS
DFISPSISPRLRTNTVVEKTDQGVVEASIPESRCSGQDNSGGNGVSRNSISSPLTPNKVS
KREIESPHLSVVPEVVDSGLHFVAVEQEQLNEPKQLYCPMSEERESITVASASLKHSVTN
TEQILNTESSLTPDGLGIPIIQIVDEAKSSSNGSGELSAQSSIKPMPRKRTRAQRLESSS
DSSACSGEDLPTLNEIFGTSAPPAAATQDQGKSDKANRRKGLGAGGGAQLSRPPACPSPD
FVNSSQASVDLFGTPDDCDVAVNDPSVSVESSQFSSEVLVTQQKIEMKNELVRLEKLMAL
VSEVLQEKEGSPAKEIPSKTNQSSKITGPDAHRPLRCEQDTGSDRKAVVEAEQEPNMRPS
DRKAVTQPGASKHGSMAEIAAQHSTHAGPSVKGTAASKTLSSSSAAKTLKSNVSPSDGQE
DKENSTPPSERSKAKMVLVSSGLGPSEQILVKKFAKQVGARVVSQVTAEVTHVIMHTDEQ
LVCERTLKYFLGIAGRKWVVSSLWISECFKQKKVLDESLFEVRGDVVNGSNHQGPMRART
TEDNNLLMNGYKICFQGPFTDMTTDEMEWMVELCGAAVVRDPLLLDSKQKSHQLVIVQPG
SESPSSRYSIRFPSGHAAVSGCTSVDIPAGAPDPAPTCPLVPGLECARACGRTYRTVTAW
MKWQPLPAQRIRRVPDKSGGE
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaatagccacagatgttaaaaaggggatttcagtcctctgggagactcta
cagtgtccaatatgcttggatttaatggagacacctgtgtctactaagtgtgaccatcag
ttttgcaaattttgtatgatgaaacttttggacaacaccaaacaaaacagggctaactgt
cctgtgtgtaaagccaagataaccaaaaggagcttacaggagagtcctggttttcagaga
cttgtcgcaggactgcaggacatgatacaggcatatgaacatgacactgggacaaatttc
gtaactggattggcacagcaagaacaacaatcaggggtcatagatgctgaagctaccaaa
cattgtgatgagatgtcatctggagacaaaccttgctctgaccgtgacaactttgaaaat
gttgacgatgatgatcttcccaagtcttgttcctcaactgttgcagcccagaatggattt
gcaagacttatggagcttgaagacacaagtcctttgacaacagaaaatgaaggcctggac
agtggccttggggaggctccaccaacatctgacaagaaaatgcacagctctacagataat
ttgaaaccactggaaacagaaacatcagatattgtggaaaaggcaacatcaactcgcaaa
acgagagagaaaatgagagtttctgaattggaggaatcctcccttcatccattattaatt
ccagacgagactgaacaccctcctttaagaaagtcctcaaggaagaaacggaaaaaggat
tcggagcctgacaagattcttgaccaaaaacagaagaaaagtctagagaaagttgctgag
tggctcatgaaagttccaactgaaggaagtctcgagttggagaaacccgatgacgacaca
gatgactctgacagctgttcttctgattcaacaatagatgtcaggcaacacaatagtgat
gtgtatcataaaagggagaatcatgccaaagcccttgaagagcaggtgttcggggctgtc
tataaacgagggcgaagaatgaacaggagcacctctcctggtaatgtttttgtcaaacca
ttgaaaactaaagttagaacgacacctgattttagcatgaaaacaacctctgatgataaa
agtgacagcgatatagaggaagagcaacaaatgacagaagaagtaaaggacaccagcagt
gacattttgaaagaagcagaagagatggccgtcatggaggaaaatgatgttgacaaatat
gaggaagacttgaccaacttcacagaaagtgacaagaataatgacaaagaggaggttccc
tgtcctgtgtctgatattggacaaccagaaagaaagtcaatgaaaaggacgcgaaacact
cagcaacaggttgacagcgatcttctggagcaaactaagtcagaaagcactgaacaaaag
aaagttgacaaaaggaaaggtaaaaacacaaagtcggaaaaatgcaagcctgcgagagtg
acaaaaccccttgttctggttgaagttcaaaatggagaaaccagtcctaagacccgacca
aggtcagaagaggttcaagttcatattgagaattaccctagcagcgaagaccaagatata
catgtcacaaggatcaccaggagaagtagacgacttcaggtattcactgaggaagtccag
gaagatcacaagaaagcaaacttgaaaaccccaaaagtacccaaaaaagtcagcaaagtt
gcagagcaatccaagggcactaaaggtggaacagtggtgaacacggcatcaccaacaaat
aaaaacatgacaaaggcgccagaaagaaatggatgtatttatgatcaagatttaggagga
atagaaaacgtggagtctggtgaaaaaacaccttttatgggaccacaagacaatgcaaac
gagtccattgctgaagtgccaaatcctgaaactttgtctaaagcgagtcctgcctgttat
gtccctgcggtgccgagctctataagcccagctgaagcagctgcagtagatccaacattt
gaaagtcacagtccaaaccatatccagttggacaattcagcttgcgagactgagtgtgct
ggaatagaaaatgaggaggataagaacgacagtgagctggacactgagcaactgctcagg
agcttcaaagccactaaaaggaaatccttccatcttggcggaccaaatgtgaaaagaagc
cgtagttcagaccaagaaaactttcagtgcactgaattgggaaaaaataggctgcacaca
aagttgtctgaaatcactaacaaagaggcattaagagaccacgaaaacttgtctggtagt
gatttcatctccccttctatctcaccgagactgagaacaaatacagttgttgagaaaaca
gatcaaggcgttgtagaggcttcgatccccgaaagccgttgttcaggtcaggacaacagt
ggtggtaacggtgtctccaggaatagcattagtagtccccttactcctaataaagtgtca
aagcgtgaaatagaaagtcctcatctttctgttgtgcctgaagtggtagattctgggctc
catttcgtggctgtcgaacaggagcagctcaatgaaccgaagcagctttattgtccaatg
agcgaagaacgagagagcattacagtggccagtgccagcctgaagcattcagtcaccaac
actgaacaaatactgaacacagaatcctctttaactccagatggccttggaatacccatc
atacagattgttgatgaagcaaagtcatcaagcaatggtagtggagagctcagcgcccaa
tcctccatcaaacccatgcccaggaagaggacgagggcgcagaggctcgagtcttcatca
gactcgtcagcttgcagcggagaggacttaccaaccttgaatgaaattttcggcacatca
gctcctcctgctgcagcgacccaggatcagggaaagtcagataaagcgaacagacgtaag
ggtcttggagctggtggaggagcgcagttgagtcgtccaccagcatgtccaagcccggac
tttgttaattccagccaagcgtctgtggacttgttcggcacaccggatgactgtgatgtc
gcagtaaatgacccaagtgtttctgtggaatcgtcacaattttctagtgaagtccttgtt
acccagcaaaagattgagatgaagaatgagctggtgaggttggagaagttgatggctctg
gtgtcagaggtgctccaggaaaaagagggcagtcccgcaaaagaaatcccctcaaaaaca
aaccagagcagcaaaatcacgggcccagacgctcaccgacccctccggtgcgaacaggac
acaggttcagacaggaaagctgttgtagaagcagaacaagagcccaacatgagaccatct
gacagaaaagcggtcacacagcctggtgcatcaaagcacggcagcatggcagagattgca
gcgcagcactccacacacgcggggccgagtgtaaaaggcacagcagcctccaagacactt
agttcaagttcagcagccaagacattaaagagcaatgtttcaccgtcagatgggcaagaa
gacaaagaaaatagcacccctccgagcgagagaagtaaagcaaagatggtgctggtgtcg
tctggattaggacccagtgaacagatactcgtgaaaaagtttgctaagcaggttggtgcc
cgtgtggtctcccaggtgacggcagaggtcacccatgtcataatgcacacagatgaacaa
ctggtgtgtgagcgcacgctgaagtacttcctaggcatcgcgggcagaaagtgggttgtg
agctccctgtggatttcagagtgcttcaaacaaaagaaagtcttagatgagagtctcttt
gaggtgagaggtgatgtggtgaatggatccaaccaccagggccccatgagagctcggacc
accgaagacaacaatctgctcatgaacggctacaagatctgcttccaaggaccttttaca
gacatgactacagatgaaatggagtggatggtggagctctgcggagcagctgtagtcaga
gatcctcttctgctcgacagtaaacagaagtctcatcagctggtcattgttcagcctgga
tcggagtctccatcgtccagatacagcatcaggtttccgtctggacacgctgcagtgagc
ggatgcacaagcgtagacatccctgctggtgcgcccgaccctgcacctacctgcccatta
gtacctggactcgaatgcgctcgcgcctgtgggaggacctatcggacagtgacagcgtgg
atgaaatggcagccgctgccagcccaaagaattagacgggttcccgacaagagtggaggg
gagtga
DBGET
integrated database retrieval system
