Acanthopagrus latus (yellowfin seabream): 119012045
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Entry
119012045 CDS
T08233
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
alat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119012045 (dse)
Enzymes [BR:
alat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
119012045 (dse)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
119012045
NCBI-ProteinID:
XP_036941391
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All DBs
Position
22:complement(2116106..2141777)
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AA seq
961 aa
AA seq
DB search
MRTHTRGAPTVFFLSLLWPLLSLVVVVAAAAVEVDPSRGIPFMGGNYNGHPMLYFSPGDV
EEMQYAATGTHRDMARRIREAGETMLEHPEEYLPPWSPAEFSARWNEVYGNNLGVLSMFC
LLYPHRAGAVDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQ
QERFIQVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWT
KQVLSIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFAISHFDHPWLLKH
FAFLYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADQIHQNRVME
GPGQAGKGQRWCTLHTEFIWYDPSLFPKPPSDFGTSQLHYFEDWGVVTYGSALPTGTNHS
FLSFKSGKLGGRAIFNIVHRNKYKEWIKGWRNFNAGHEHPDQNTFTFAPNGVPFITEALY
GPKYTLLNNAVLFSPAMSGSCFKPWAGQVTEACDSKWLKYKVGLAADTQGRVEAAMERQG
MVFIRGEGHSAYNPELKIRNFQRNLLLLHPQLLLLVDHIHLDPDSPTRAMSAFFHNTELP
FQGTKIDGVHGAFVSHREDKYKMFWMDDTGYSNKGLVGYWNYPRGYPYNGSNYVNVTMPL
RYPHTRVAYIFFGPGVDIQSFSLRGDDTRVDIYLATKDHTYTIYLLTGEATSKPLFAMVL
LDNKKIVFEKASAVMDSSPEEVEEYVNVMEDNLQHVKPVFQQMERHILGRVLNNASFRKT
AERLLQFSDKKKTEEVIEKMFAMSKKQGKSKGGRKVNLGEKLSESLPDIFAQIELNEKKE
RQRTSKRTYEDSPEEGDAESRAFMDYTDGRKNRKGAFVKGRKFKEVHMVATAGSEGLSST
ASYIRLFLLLNTATFFLLLAVILTRFQRGRSLHTQRCFYTILLIDCFILLYLYSSCSHTQ
C
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagaacccacacccgcggggcccccacagtcttcttcttaagtctgctgtggcccctg
ctctctttggtggtggtggtggcagcagcagcggtggaagtggaccccagcagaggaatc
cccttcatgggaggcaactacaatggtcatcccatgctgtacttcagtccgggggatgtg
gaggagatgcagtacgcagccacggggactcaccgggacatggcgaggaggatccgtgag
gctggtgaaaccatgctggagcaccctgaggagtacctgcccccctggagccccgcagag
ttcagcgcccgctggaacgaggtgtatggaaacaacctgggtgtgctgtccatgttctgc
ctgctgtacccacacagggccggggctgtcgacctcgccaaggattatatggagagaatg
gcagctcagcctagttggttggtcaaagatgcaccctgggatgaagtccctttggcacac
tctttagttgggtttgccaccgcatatgacttcctgtatgagtacttgaacaagggccag
caggagcgtttcatccaggtgatcggcaatgcgtcacggctcatgtatgagaagtcctac
gtccgaggctgggggttccagtacctgcacaaccaccagcccaccaactgtgtcgctctg
ctcacaggaagccttgtttacatgacccaaggttatctccaggaggcctacctgtggacc
aagcaggtcttgtccatcatggagaagtccatggtccttctgcaggatgtgactgatggc
tcgctgtatgaaggagtggcctacgggacttacaccacccgctctctgtttcagtatatg
ttcctggtgcagcgccacttcgctatcagccactttgaccatccctggctccttaaacac
tttgctttcctttaccggaccatcctgcctggatttcagcgcactgtggccattgcagat
tccaactacaactggttctatgggccagagagccagctggtctttttggaccgttatgtg
ttgcgtaatggcagtggaaactggctagcagaccagattcatcaaaacagggtgatggaa
gggccagggcaggctggaaaaggccagcgatggtgtactctccacacagagttcatctgg
tatgacccaagcctgtttcccaagcctccatcagattttgggacatcccaactccactac
tttgaggactggggtgtggtgacatatggcagtgcattacctacaggcaccaatcacagc
tttctctccttcaagtccgggaagctggggggtcgcgccatcttcaacatcgttcacagg
aacaagtacaaagagtggatcaaaggatggaggaacttcaatgctgggcatgagcaccct
gatcagaacactttcacttttgcacccaatggtgtcccatttattactgaggcattgtac
ggacccaagtacactttgttgaataatgcagttttgtttagcccggccatgtcagggagt
tgctttaaaccatgggctggacaagttactgaagcttgtgattccaagtggctgaaatac
aaggtggggctggctgctgatacccagggcagagtagaagctgctatggagagacaggga
atggtcttcatacgtggtgagggacattcggcttataatccagagctgaagatcaggaac
tttcaaagaaacttactccttcttcatccacagctcctgctcctcgtggatcacatccac
ctggatccagacagcccaacaagggcaatgagtgccttctttcacaacacagaacttcca
tttcagggtacaaagatagatggtgttcatggagcatttgtatcacacagggaggataag
tataaaatgttctggatggatgacacaggctacagtaacaagggattggtaggttactgg
aattaccctcgagggtacccgtacaatggctcaaactatgtgaacgtcacaatgccattg
aggtaccctcacacaagggtggcctacatcttttttggaccaggtgtggatatacagagc
ttcagcttgcgtggcgatgacacgagagtggatatttatctggccaccaaggatcacacc
tacaccatctacctgctgaccggggaggccaccagcaagcctctgtttgccatggtgctg
ctggacaacaagaagattgtgtttgagaaggcgtcggctgtgatggacagctcgcctgag
gaggtagaggaatacgtcaatgtgatggaggataacctccaacacgtcaagcctgtcttc
cagcagatggagagacacatcctcgggcgagttctcaacaatgccagcttccgtaagact
gcagagcgcctccttcagttctctgacaaaaagaagacggaggaggtcattgagaagatg
tttgctatgtccaagaaacagggcaagagtaaaggggggaggaaagtaaaccttggagag
aagctttctgagagtctacctgacatttttgcacagattgagttgaatgagaaaaaggag
agacagaggacttcaaagcgtacttatgaggacagtccagaggagggagatgcagagtca
agggccttcatggattacacagatggccgcaaaaacagaaagggggcatttgtgaagggc
cgcaaattcaaagaggttcacatggtggcaacagcggggagcgagggtctctctagcaca
gcctcctacattaggctgtttctcctcctcaacactgccactttctttctgctgctggct
gtgatactgactcgctttcagaggggtcgcagcctgcatacacagaggtgcttctacacc
atccttctgatcgactgcttcatcttactgtacctctactcctcctgctctcacacacag
tgttaa
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