Acanthopagrus latus (yellowfin seabream): 119012316
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Entry
119012316 CDS
T08233
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119012316 (otofa)
Membrane trafficking [BR:
alat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119012316 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Ferritin-like
Motif
Other DBs
NCBI-GeneID:
119012316
NCBI-ProteinID:
XP_036941901
LinkDB
All DBs
Position
22:14141448..14225890
Genome browser
AA seq
2052 aa
AA seq
DB search
MMALMVHLKTVAHLRGRGDRIAKVTFRGLPFYSRVAENCDDVAHFNETFRWPIASRLDGN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTDTLIDDNNTSIKTNVTIEIRYQ
SMDGTVGVWSDGEFLDVPDDRDGMFAFETDSLLSGQSHGSGTSPGRSLQGSIPTFRKAGK
GVFSAMKLGKIKISKDDHKKGDEPAILDMEDLDRKAMRLAGSLDPDTISLASVTAVTTNV
SNKRSKPDIKMEPSSGRPVDYQISITVVEARQLIGLNMDPVVCVEIGDDKKYTSMKESTN
CPYYNEYFVFDFHVPPHVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFY
HKWAILSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGIPAE
RQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFAGQKGKTSVQKSS
YEPIWNEQIIFTELFPPLCKRMKVQIRDSDKVNDVAIGTHFVDLRKISNDGDKGFLPTMG
PAWANMYGSTRQYTLMDEHQDLNEGLGEGVSFRARLLLSVAVEILDTTAPEIMSSTEVQV
EGVSNISESATGKIDEFFLFGSFLEATMIDRKIGDKTISFEITIGNYGNQIDGVSKPSSA
KKKKKDGENEEEENELIQNSSEDEADEESDLVSVSCTPPMKPVITDRNYFHLPYFAKKPC
VYIRSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEDLSIGC
SRFVTLANKDVNQAGRTKLDRERLKSCMREMDSMGQQAKQIRTQVKKNTVRDKLKLVQNF
LQKLRFLADEPQHSIPDVFVWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKVKAVFL
KLPGKKGFGPAGWTVQAKLELYLWLGLNKQRKDFLSGLPNGFEEIKAAQAGPGLQSVPPV
SLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQL
LVFDDVELFGEASELRDDPPIIVVEIYDQDTVGKAEFIGRTFAKPTIKMCDEHYGPPRFP
PQLEYYQVYRGNCTAGELLAAFELLQIPFDEEAIRRALIAVHNFAVPQIKIGQGGRADLP
PLEGPTDSERGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRG
VQSVLIQNYKKNPNFSILVKWFEVDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVTSL
RRFIYSTPDKTSNNWATAAKLMNGYMVLANGGSQPRSSPSLSSRTFSRPAGDITVNMDSE
PSLRKMDTVVKLDATSDAVVKVDMTEEESDKEKKKKKKKKKGGMDEDDEPDERVLDWWSK
YFASIETLKETLRAQEMAQAEAEEREDLEIAAEAADIKIDDLLLKGSKTNQKSKEKKGSK
DKKKGLAADGSEKRPVKAKVDELLVYNKELESEYGNFEDWLHTFNLYRGKAGDDDEHALD
DDRIVGRFKGSLCMYKLPLSEEITREAGFDPNMGMFQSIPHNDPINVLVRVYVVRATDLH
PADINGKADPYIVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSVYDWD
LVGTDDLIGETKIDLENRFYSKYRATCGISSNYSVHGYNVWRDPMKPSQILAKLCKEGKI
DGPHYGPGGKVKVANRIFTGPIEIEDENGLKKQTEEHLALTVLNHWEEIPRVGCKLVPEH
VETRPLLNPDKPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKRYELRVIIWNTDEVI
LEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLMAEEK
IVISKKESMFSWDETEYKIPPRLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCS
LDMIRNEHELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTAEEAEKSPVG
LGRNEPDPLEKPNRPDTTFLWFLSPLKAIRYLVCNRYKWLIIKIVLALLLLIMLGLFLYS
MPGYLVKKLLGA
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgttaatggttcacctgaagacggtcgctcacctccgggggagaggtgacagg
atcgctaaagttacgttcagaggtctgcccttctacagccgcgtggcagagaactgcgat
gacgtggctcactttaatgagacatttcgatggccaattgcgagcagactggatggaaac
gagatgctggagatccaagtatacaattacagcaaagtcttctccaacaggctggttggg
actttctgcatggtacttcagaaggtggctgaggagggacacctagagctgaccgacaca
ctcattgacgacaacaacacatcgatcaagaccaacgttaccatagagataagataccag
tcgatggatggcacagtgggagtgtggagcgacggggagttcctggatgttcccgatgac
cgggatgggatgttcgccttcgaaaccgacagcttgctgtcaggacagagccacggttcc
gggacgtctcctggacgatccttacaaggatccataccgaccttcaggaaagcagggaag
ggagttttctcagccatgaagctcggaaagatcaagatctctaaagacgatcacaagaaa
ggagatgagcctgcaatcctggacatggaggacctggacaggaaggcaatgcgtcttgct
gggtctctggatcctgacaccatctctctggcctctgtcacagccgtcaccaccaacgtc
tctaacaagaggtcaaagccagatatcaagatggagccaagttctggacgaccagtggat
tatcagatcagcatcacagtggtcgaggcccggcagctgataggcctcaacatggacccc
gtggtgtgtgtggagatcggagacgacaagaagtacacgtctatgaaggagtccaccaac
tgcccctactacaacgagtatttcgtcttcgacttccacgtcccccctcatgtcatgttc
gataagatcatcaagctctcggttattcactcgaaaaatcttctccggagcgggaccctg
gtgggaacgttcaagatggatgttggcaccgtttactcccagcccgagcatcagttttac
cacaagtgggccatcctgtccgaccccgatgacataacagcgggctgcaaagggtatata
aagtgtgacatcgctgtggtggggaagggcgacaacatcaagaccccgcacaaggccaac
gagacagatgaagacgacatagaggggaacctcctgctcccggagggcatcccggcagag
aggcagtgggcccggttctatgtgaagatctaccgtgccgagggacttcccaaaatgaac
accagcatcatggctaatgtgaagaaggcctttataggagagaacagagacttggtcgac
ccctacgttcaagtgcagttcgccgggcagaaagggaagacatcagtccagaagagcagc
tacgaaccaatctggaacgagcagatcatcttcaccgagctgttccctccgctctgcaaa
cgcatgaaggtccagatacgagactcggataaggtcaacgacgttgccataggaacgcac
tttgttgacctgcgcaagatatcgaacgatggtgacaaagggttcctgcccaccatgggt
ccagcttgggctaacatgtacggttccacccgtcagtacactctgatggacgagcaccag
gacctgaacgagggtctcggagagggcgtgtccttcagagcgcgtctcctgctgtccgtc
gctgtggagatcctggacaccactgcacctgagatcatgagctccaccgaggtgcaggtg
gagggtgtctccaacatctcagagagcgccactgggaaaatagacgagttcttcctcttc
ggttccttcctggaggccaccatgatcgacaggaagatcggggacaaaacgataagtttt
gaaatcacaataggtaattatggcaaccagatagatggtgtaagcaagccttcatcagca
aagaagaaaaagaaagatggggagaatgaagaagaggagaacgagctcatccagaactcc
agcgaggacgaggcggacgaggagagcgacctggtgtctgtctcctgcacgcctccgatg
aagcccgtcatcacagacaggaattacttccaccttccctactttgcaaagaagccctgt
gtgtacatcagaagctggtggcaggaccagagaagacgactttacaactccaacatgatg
gacaagatcgcagacaaactggaagagggtttgaacgatgttcaggagatcattaagaca
gagaaggcctttccagagcgcagactcaggggagtgctggaggatctgagcatcggctgc
agccggtttgtgaccctggcgaacaaggacgtgaaccaggcgggccgaaccaaactggat
cgggagcgtctaaagtcctgcatgagagagatggacagcatgggccagcaggccaagcag
atccggacccaagtgaagaaaaacacagtcagagacaaactgaagctggtgcagaacttc
ctgcagaagctccggttcctcgctgacgagcctcagcacagcatcccagatgttttcgtc
tggatgatgagcaacaacaagcgcatcgcttacgcccggattccctccaaagacatcctg
tactccatcgtggacgaggagacggggaaagactgcggcaaagtcaaagctgtgtttctc
aagctgcctggtaagaaggggtttggtcctgcaggctggacagtccaggctaagctggag
ctgtatctgtggctcggcctcaacaagcaaaggaaggacttcctcagcggtctgcctaat
ggctttgaagagatcaaggctgctcaagcaggtcccggtcttcaatccgttcccccggtc
agcctcgtctataacatgaagcaggtgttccagctgagagctcacatgtaccaggcccgc
agtctgtttgccgctgacagcagtggcctttcggatcccttcgctcgggtcttcttctcc
acgcacagccaggtcaccgaggtcctgagcgagactctgtgccccacgtgggaccagctg
ctggtgttcgacgacgtggagctgttcggggaggcgagcgagctgagagacgacccgccg
atcattgtggttgaaatctatgaccaggacaccgtgggcaaggcagagttcataggtcgg
acgtttgcgaagcccacgatcaagatgtgtgacgagcactacggcccgccgaggttcccg
ccacagctggagtactaccaggtttacagagggaactgcaccgccggggaactgctggct
gccttcgagctgctgcagattcctttcgacgaggaggcgattaggcgagctctgatcgct
gtccataactttgctgtccctcaaataaagatcggtcaaggagggagggccgacctccct
ccccttgagggtccgacagactccgaacgtggacccattctaccggtgccgctgggcatc
cgacccgtcctgagtcgctaccgcatagaggttttgttctggggcttacgggatctgaag
aggattaacctggctcaggtggatcggccccgtgtggacatagagtgcgccggtagaggc
gtgcagtcggtcctcatccagaactacaagaaaaaccccaacttcagcatcctggttaaa
tggtttgaggtggacctcccagagaacgagcttctacaccctcctctcaacatccgggtg
gttgactgccgggcgtttggccgttacatcctggtggggtcccacgccgtcaccagcctg
agacgtttcatctacagcaccccggacaagacctccaacaactgggccacagcagctaag
cttatgaatggctacatggtccttgccaatggcggctcccagcctcgctcctcacctagc
ctttcctcccgcaccttctctcgccccgcaggtgacatcacggtcaacatggactcagag
ccctcgctccgaaagatggacacagtcgtcaagttagacgctacgtctgacgctgttgta
aaagttgatatgactgaggaggagagcgacaaagagaaaaagaagaagaagaagaagaag
aagggaggaatggacgaagatgatgagccggatgagagagtgctggactggtggtccaaa
tattttgcttcaatagaaacacttaaagagaccctcagagcccaggagatggctcaggct
gaggcggaggagagggaggacctggagatagctgcagaggccgcagacatcaaaatcgat
gaccttcttctgaaaggctccaagacgaatcaaaagagcaaagagaagaagggctccaag
gacaagaagaagggtctggctgctgacggctccgagaaaagaccggttaaagctaaagtg
gatgagctgctggtgtacaacaaggagctggagagtgagtacggcaacttcgaggactgg
ctccacacttttaacttgtacagaggaaaggcaggggatgacgacgaacacgcgctggat
gacgacaggattgtcggcagatttaagggatctttatgtatgtacaagctacctctgtcg
gaggagatcacgagagaggcaggatttgatcccaatatgggaatgttccagagcattcca
cacaacgatccaatcaacgtcctcgtccgtgtctatgtggtccgggctacagaccttcat
cccgctgacatcaacgggaaggctgatccgtacattgtcataaagctggggaagtcagag
gtcaaggacaaagagaactacatctccaaacagctcaatcctgtgtttggcaaatcattc
gacatcgaggccacgttccccatggagtccatgctgacggtgtccgtgtacgactgggac
ctggtcggcactgatgacctgattggagagacaaagatcgacttagagaaccgtttctac
agcaaatacagagccacctgtggcatttcatccaactattctgtccatggatacaatgtt
tggcgggaccctatgaagcccagtcagatcctggcgaagctctgtaaggagggcaagatc
gatggacctcattacgggccgggaggcaaagtcaaggtggcgaatcgaatcttcacggga
cctatagagatcgaggatgaaaatggtctgaagaagcagaccgaggagcatttggccctc
acggtgctgaaccactgggaggagatccccagggtgggctgcaagcttgtccctgaacac
gtggagaccagacccctgctgaaccctgacaaacccggcatcgaacagggccgtattgag
atgtgggtggacatgtttcctatggacatgcctgctcctggacccgcgattgacatatca
ccacggaaaccaaagagatatgagctcagggtgattatttggaatacagacgaagtaata
ctggaggacgatgattacttcactggggaaaagtccagtgacatatttgtcaggggatgg
ctgaaaggacaacaggaggacaagcaggacacagatgtgcactatcactctctgactggt
gagggcaactttaactggcgctttgtcttcccctttgattacctcatggccgaggagaag
attgtcatctcgaagaaagagtccatgttctcctgggatgagactgaatataagatccct
cctcgcctcacgctgcaggtctgggacgccgatcacttctccgccgatgatttcctgggt
gcgattgagttggacctaaaccggttccctcgtggcgccaagacggccaagcagtgttcc
cttgacatgatccgaaatgagcacgagctgcccaccatttccatcttcaaacagaagcgg
gtcaaaggctggtggccattcgtggcccgagatgagaacgacgagatggagctcacgggt
aaagtagaagctgagcttcatctggtgacagcagaagaagccgagaagagtcctgtcgga
cttggacgaaatgagccggatccactggagaaacccaatcgcccagacaccaccttcctg
tggttcctgagcccgctgaaagccatccgctacctggtgtgcaaccgctacaagtggctg
atcatcaagatcgtgctggccctgctgctgctcatcatgctgggcctcttcctctacagc
atgccgggctaccttgtcaagaagctgctgggggcctga
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integrated database retrieval system
