KEGG   Acanthopagrus latus (yellowfin seabream): 119014240
Entry
119014240         CDS       T08233                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04145  Phagosome
alat04514  Cell adhesion molecules
alat04672  Intestinal immune network for IgA production
alat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119014240
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119014240
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119014240
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119014240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alat04147]
    119014240
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119014240
  Exosomal proteins of epithelial cells
   119014240
  Exosomal proteins of breast milk
   119014240
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 Ig_3 C2-set_2 I-set
Other DBs
NCBI-GeneID: 119014240
NCBI-ProteinID: XP_036945136
LinkDB
Position
23:complement(11597256..11609756)
AA seq 239 aa
MYFQTLLIFSAAVCICAQRSYELCHTYGCFESSDTQLTVTLDGDEVYYADFKKGVLVWES
RLATMLHISWAYQDAVYYRSICKSNLLRWKPDKSAKERPKEAPEIMIYPRDDVVTEEENT
LICFINHFYPPTINIKWTKNDEEIMVEDAFYKCTPNSDGTFYVFSTLSFVPKQGDIYSCT
VEHESLKGPQTKFWDVETDEISNAPDVFCGLGLSLGLLGVPAGIFFFVKGSQYQNIWEA
NT seq 720 nt   +upstreamnt  +downstreamnt
atgtacttccaaactcttcttattttctcagcagctgtgtgcatctgtgcacaaagaagt
tatgaactttgtcacacctatggatgctttgaatcaagcgatactcaactcactgtgaca
ctggacggcgacgaggtctactatgcagactttaaaaagggggttctagtttgggaaagc
agactggccacaatgctgcatatttcttgggcttatcaagatgcagtatattacagatct
atatgcaaaagtaacttactgagatggaaaccagacaagtcagcgaaagagaggcctaaa
gaggcaccagaaatcatgatctaccccagagatgatgtagtaacagaggaagagaacact
ctcatctgcttcatcaaccatttctacccacctaccatcaacattaagtggaccaagaat
gacgaagaaataatggtggaagatgctttctataagtgcacacccaattctgatgggacg
ttttatgttttctccaccctgagctttgtcccgaagcaaggagacatctacagctgcact
gtggaacacgagtcactgaaggggcctcagaccaagttttgggatgttgaaacggatgag
attagtaacgctccagatgtcttttgtggacttggcctgagtcttggacttcttggagtt
cctgcaggaattttctttttcgtgaaaggaagccaataccagaatatctgggaggcctag

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