Acanthopagrus latus (yellowfin seabream): 119014578
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Entry
119014578 CDS
T08233
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03272
Virion - Hepatitis viruses
alat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119014578 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119014578 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119014578 (ldlra)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119014578 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
DUF5050
hEGF
Vgb_lyase
EGF_3
Psg1
Motif
Other DBs
NCBI-GeneID:
119014578
NCBI-ProteinID:
XP_036945779
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All DBs
Position
23:5322066..5334382
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AA seq
901 aa
AA seq
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MGPSRYALFLLCYLAQTNALTTCGTKQFQCGNGKCITTRWVCDGTDDCGDGTDELPGTCM
AKTCKPTEFSCADRLNQCVPSTWRCDGKADCENGADEETCAPKQCTSNEFRCSSGQCVSS
SFVCDDEADCDDGSDEASCPPLTCSSASFQCNNTVCVPRLWACDGDADCSDGSDEWPQNC
GTQKPDAPVAHHCSALEFRCGSGECIHGSWKCDGGADCLDRSDEAGCAHPTCRPDEFECG
DGTCIHGSRQCNHQYDCRDMSDETGCVNATHCEGPTRFKCRSGECISMEKVCDKQRDCRD
WSDEPLRECGSNECLYNNGGCSHICNDLKIGYECLCPAGYRLVDTKRCEDIDECANPDTC
SQTCINMIGSYKCQCEEGYQVDPATKACKAIGTIAYLFFTNRHEVRKMTLDKSEYTRVIP
RLKNAVALDMNMATKEIYWSDISQKKIYRAQMDSADDSTRHSTIMSSDIDAPEGIAFDWI
HGNLYWTDSIRSTISVVTADGSRRKTLFHQDLSKPRAIVVDPHSNFIYWTDWGNPAKIEK
AGLNGGDRTALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIIDEHR
LAHPLGLTVFEEKVFWTDVSNNAILSANRLTGGDITPVAEHLSSPEDIILYHNLKQPAGR
DWCQVSGCQFMCLAAPQVGRYPPKYTCVCPDNMMLARNMRTCVPGVPTTAAPVQPQVPAT
TPPPQPPAPASTTPKPQIRTTPKPQARTTKVPVVITSTVARPAPRTTRPPVRTTTPEPRI
PSPQTVKPEIPQTTTEAQVTTPDFRHPFAAIPSTASTTPIALYIVVPLAIVCLVAVGGML
LWRNYRRKNTNTIHFDNPVYQKTTEDQVHIWRSHSPDGYSYPKRQVVSLDEEADNPAFTE
N
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgtcgcgttacgcgctgtttctcctctgctacctcgctcagaccaatgcattg
acaacatgtgggaccaagcagttccagtgtggaaatgggaaatgcatcacaaccagatgg
gtatgtgatggcacggatgactgtggagatggcacagacgaacttcctggaacctgcatg
gccaaaacgtgtaaaccgacagagttcagctgtgcagaccgccttaaccaatgtgtaccg
agcacttggcgctgcgatggaaaagctgactgtgagaatggagctgatgaagagacctgt
gcaccaaagcagtgcacgagcaatgagttccgctgcagcagtggccaatgtgtgtcgtcc
tccttcgtgtgcgacgatgaggcggactgtgacgacggcagcgacgaggcctcctgtcca
cccctcacctgcagctccgcgtccttccagtgcaacaacaccgtttgcgtcccacgcctg
tgggcttgcgacggtgatgccgactgctccgatggctcggacgagtggccccagaactgt
ggtacacagaaacctgatgcccctgtggctcatcactgctcagccctggagttccgctgt
ggcagtggagagtgcatccatggaagctggaagtgtgatggaggagctgactgccttgat
cgatccgacgaagcgggctgtgctcaccctacctgccgtcctgatgagtttgaatgcggt
gatggcacttgcatccatggaagccgccagtgcaaccaccaatatgactgcagggacatg
agtgatgagactggctgcgtcaatgcaacccactgtgaaggcccgaccaggttcaaatgc
cggagtggggaatgtatcagcatggagaaggtgtgtgataagcagcgtgattgcagggat
tggtcagatgagcctctcagggaatgtggctccaatgagtgtctgtacaacaatggcggc
tgctctcacatttgcaacgacctgaagattggctacgagtgcctgtgtcctgctgggtat
cggctggttgatacaaaacgctgtgaagatattgatgagtgtgccaacccggacacctgc
agccagacctgcatcaacatgataggcagctacaagtgccagtgtgaggagggttaccaa
gtcgacccggcaaccaaagcctgcaaggccatcggtacaatagcctaccttttcttcacc
aaccgtcatgaagtcaggaagatgactttggataaaagtgagtacaccagagtgatcccc
cgtctgaagaacgccgtggctctcgacatgaacatggccaccaaagagatctactggtca
gacatctcccagaagaagatctacagagctcagatggactcggctgatgactccactcgt
cacagtacgatcatgagcagcgacatcgatgctcctgaaggcatcgcttttgactggatc
catggtaacctgtactggactgacagcattcgcagcaccatctctgtggtaactgcagat
gggagccgtcgcaaaacgctcttccaccaagacttatctaaaccccgcgccattgtggtc
gacccccacagcaacttcatttactggacagactgggggaatcctgccaaaattgaaaag
gcaggtctgaacggaggagaccgcactgctctggtcaccgacaacattgtttggcctaac
gggatcacacttgacctgttgaaccagcggctctactgggtggactctaagctacacacc
ctctccagtatcgacgtgcagggcggtggtcgtcgcaccctcatcattgacgagcacagg
ctggctcaccctctggggctcactgtgtttgaggaaaaagtgttctggacggatgtcagc
aacaacgccatcctgagtgctaacaggctgacgggtggtgacatcacaccagtggcggag
cacctatcctcaccagaagacattattctttaccataacctcaaacaacctgccggtaga
gactggtgccaggtatccggatgtcagtttatgtgcctggcagctcctcaagttggaaga
tatccccccaaatatacctgcgtctgtccagataacatgatgctagccaggaatatgagg
acgtgtgtacctggtgtgccaacaactgcagctcccgtgcagccgcaggttccggccacc
accccacctcctcagccaccagcgcccgccagcaccacacctaagccccagatccgcacc
acacctaaaccacaggcccgcaccaccaaagtgcccgtcgtaatcaccagcaccgtggcc
aggccggcgccacgcaccaccaggcctcctgttaggaccaccacacctgaaccaaggatc
ccgtcaccccagactgtgaagcctgaaattccccaaactaccacagaggctcaagtcacc
actccagatttccgacacccattcgcagctatcccctcgactgcctccaccaccccgata
gctctgtacattgtcgtacctctggcaatcgtttgtctggtggctgttggtggcatgctg
ctatggaggaactacaggagaaagaacaccaacactattcactttgacaaccccgtctat
cagaaaaccaccgaggaccaggtgcacatttggaggagccatagtcctgatggttactcc
tacccaaaaagacaagttgtcagcttggatgaagaggcggacaatccagccttcacggaa
aactga
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