Acanthopagrus latus (yellowfin seabream): 119016898
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Entry
119016898 CDS
T08233
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04060
Cytokine-cytokine receptor interaction
alat04150
mTOR signaling pathway
alat04210
Apoptosis
alat04217
Necroptosis
alat04350
TGF-beta signaling pathway
alat04620
Toll-like receptor signaling pathway
alat04621
NOD-like receptor signaling pathway
alat04622
RIG-I-like receptor signaling pathway
alat04625
C-type lectin receptor signaling pathway
alat04920
Adipocytokine signaling pathway
alat05132
Salmonella infection
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119016898 (tnfa)
04350 TGF-beta signaling pathway
119016898 (tnfa)
04150 mTOR signaling pathway
119016898 (tnfa)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119016898 (tnfa)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119016898 (tnfa)
04217 Necroptosis
119016898 (tnfa)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119016898 (tnfa)
04621 NOD-like receptor signaling pathway
119016898 (tnfa)
04622 RIG-I-like receptor signaling pathway
119016898 (tnfa)
04625 C-type lectin receptor signaling pathway
119016898 (tnfa)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119016898 (tnfa)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119016898 (tnfa)
09171 Infectious disease: bacterial
05132 Salmonella infection
119016898 (tnfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
alat04052
]
119016898 (tnfa)
00536 Glycosaminoglycan binding proteins [BR:
alat00536
]
119016898 (tnfa)
Cytokines and neuropeptides [BR:
alat04052
]
Cytokines
Tumor necrosis fators
119016898 (tnfa)
Glycosaminoglycan binding proteins [BR:
alat00536
]
Heparan sulfate / Heparin
Cytokines
119016898 (tnfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
119016898
NCBI-ProteinID:
XP_036949152
LinkDB
All DBs
Position
3:14528127..14530725
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AA seq
246 aa
AA seq
DB search
MEGECKVQLDAAVDAEARKGTTQSVRAGPKLTTILLTFTLCLAAAATVAVSAFNRHAKGP
GQDEENNFELHHTLREIMNVRAAIHLQGEYNSDLRTSVQWREQVDQSHSQGGLRLDNNEI
VIPASGLYFIYSQASFRVSCSISDDDDDTTSRPLVHLSHTVQRWSPKYGNDDANKTYVPI
LHSVRTACQKTASSSPDDEGSWFSAVYMGAVFSLSKGDRLQTVMEEKMLPMLEDEPGKTF
FGVFAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagaatgcaaagtgcagctggacgccgcggtcgacgcagaagccaggaaaggg
acaacgcagagtgtcagagccggcccaaaactaaccactatcctgctgacattcacactc
tgcctcgctgctgctgctactgtcgctgtatccgccttcaataggcatgccaagggccca
ggacaagacgaggaaaacaattttgaacttcatcatacattgagagagattatgaatgta
agagcggccattcatttacaaggagaatacaactctgacctgaggacctcagtgcaatgg
agggaacaggtggaccagtcacactcacaaggagggctacgacttgacaacaatgaaata
gtgattcctgcaagtggcctctacttcatttacagccaagcgtctttccgtgtcagctgc
agcatcagtgacgacgacgacgacaccacctcaaggcccttggtccacctgagccacact
gtgcagcgctggtcccccaagtatgggaacgatgatgccaacaagacgtatgtgccaatc
ctgcactctgtccgcactgcctgccaaaagacagcgagcagcagcccagatgatgagggg
agctggttttctgcggtgtatatgggcgctgtgttcagcctgagcaaaggggacagactg
caaacagtgatggaggagaagatgctgcccatgctggaggatgagccaggcaagactttc
tttggggtgtttgctttgtga
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