Acanthopagrus latus (yellowfin seabream): 119019896
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Entry
119019896 CDS
T08233
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119019896 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119019896 (smcr8b)
Membrane trafficking [BR:
alat04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
119019896 (smcr8b)
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Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
119019896
NCBI-ProteinID:
XP_036954753
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Position
1:complement(6583810..6592826)
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AA seq
923 aa
AA seq
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MIGSPDLLAFTGTEGFGGGEEDQDAIPEELSVPLLPPSNPWTSSAQFHRDFILVAEFSEQ
VGPKPVLTMPDDPRVIGSFDLNHFSVRIMSVDYQASGPGPVPPPSPGPRLNFSEDSRVIL
GDSAEDAFAYVHHMTLYDLEARGMVRPFCMAYVCSDQAKLMENFCELSTCFSQAADSLKT
GNRQAFSMELQRKLQELEYTQLTLQQARDHPQTANGFTESGEKADELEAVERSISNHRDL
LRQVTSYPNRKLKQPDFLPYDPADTLTDPIALLPPPEPSTSTSTSTSTCRSEHPLKPLEE
LCNAYFLSLMKEQLADTERRLRGDRSMLRTARVTHSLSKRLTPINFLFELWRPEDGDEEE
GDGTEVELRKTTGTKSSVEAFQSEPMSLESFCSCVEEIPIKLEAGEARTVTPDDSVATEM
TGSVSSGDSIEVLGTEKSYRTQHVDTGSDSRAADNSLSSAEALVGMTDTSYRRAAADVGA
RRVRAYAKRANSEDSIEVLSTTESIIPEDLTAIEEEEAEYQSLSNGFGNKEEALTDYKCD
DVLTEEKTLNTTSNERPVQEDDSLIDRYETLKLKSVISEITIKEEQVSEGLSSNQVHEDQ
PEKSTSLLQAEEAVASTPPWPGVHQTVPDLHVNFAPSLTLAEVEQWSRPCAPLRLLSIDE
ASECNSFSGSSEPPTPSRNIPSNTRSNRKRRRRAGLRALRFLKQNSFSQHAVFCLLSGRP
LVVVGGDEGLVRKLVDALSLFLPAPGPEGSAVMMNLTTPLQLTDLLTWRLIGIHRSPSGS
SASILHSLTRYSRYLSLLDLDQRTLHCPSYSGSLISRLADPNTGISRGLTYLLHLESCLT
ALANQALLYTFHNALQRPTTAEGTDGSGKEDFLFKRGICSSKSDVRVMHFLSDLIKQRHA
GRGPPVLRFSYSPIHLHRNTHAA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtcaccggacctgctggccttcaccggcacggagggctttgggggaggagag
gaggaccaggatgcgatacctgaggagttatcggtccccctcttacccccgtctaacccc
tggacctcctccgcccagtttcaccgagacttcattctggtggctgaattctcagagcag
gttggacctaagcctgtgctgacgatgccagatgatcccagagtcattggatcgttcgac
ctcaaccatttctccgttcgcatcatgtctgtggactaccaggcgtccggccccgggccc
gtccctcctccatccccgggcccccgcctcaacttcagcgaggactccagagtgatcctc
ggagattcagcagaggacgcatttgcatacgttcatcacatgaccctgtacgacctggag
gctcgggggatggtgcgtcctttctgcatggcgtatgtgtgctcggaccaggcgaagctg
atggagaacttctgtgaactgtcgacgtgcttctctcaggctgctgacagcctcaagaca
ggaaacagacaagcgttttctatggagctgcagaggaagttacaagagctcgagtacacg
cagttgactctgcaacaggcgagagatcatccgcagacggctaatggcttcacagagtcg
ggagaaaaagcagatgagcttgaagccgtggagcgttcaatctcaaatcatagagacctc
ctccgccaggtcacttcctacccaaacaggaagctgaaacagcctgacttcctgccctac
gacccagctgacaccctcactgatccgattgccttactgcctcctcctgagccctccacc
tccacctccacctccacctccacctgcaggtctgagcatcctctgaagcctctagaggag
ctttgcaacgcctacttcctgtcactaatgaaggagcagctcgctgacacagagcgccgc
ctacgtggcgacaggagcatgctccgaactgctcgtgtcacacattcgttgtccaagaga
ctcacccccatcaacttcctgttcgagctgtggcgcccagaggacggtgatgaggaggag
ggagatggcactgaggtggagctgcggaaaacgacggggacgaagagcagcgtcgaggcg
tttcaatcagaaccgatgagcctggagtcgttttgctcctgtgtggaggagatcccgatc
aaactggaggcaggtgaagctaggactgtgacccctgacgacagtgttgccacggagatg
acaggaagtgtgagcagtggcgacagcattgaagtgcttggaaccgagaagtcttatcgg
acgcagcacgtcgacactggatctgacagcagagcagctgacaattcactctcctcagca
gaagcattagttgggatgacggacacctcctacaggcgagcagcagcggatgtaggcgcc
cggcgtgtgcgagcgtacgccaagcgagccaacagtgaggacagcatcgaagtcctgagc
accaccgagtccatcattcctgaagacctcaccgccatcgaggaggaagaggcggagtac
cagtctctcagtaatggctttggaaataaagaagaggcgctgacggactataaatgtgac
gatgtcctcacggaggagaagactttgaatacaacctcgaatgaacgacctgttcaggag
gatgacagtctcattgacagatacgagaccttaaagctaaaatcagtcattagtgagatt
acaatcaaagaggagcaggtcagtgagggtttgagcagcaatcaggtccatgaagaccaa
cctgagaagtcgaccagtctactgcaagctgaagaagccgtggcctcgacgcctccgtgg
cctggagtccaccagacagtgcctgaccttcatgtgaacttcgccccctctctcaccctg
gcggaggttgaacagtggtctcgtccctgcgctcctctcaggctgctgagcatcgacgag
gcgtctgaatgcaacagcttctctggctcctcagaaccgcccactcccagcagaaatatc
cccagcaacacccgctcaaacaggaagaggaggaggagggctggactcagagccctcagg
ttcctcaaacagaactcgttctcccagcatgctgtgttttgcctcctgagtggccggccg
ctggtggtcgtcggaggagatgagggtttggtcaggaaactggtggatgctctgagtctc
ttcctgcctgctcctggtcctgagggaagtgctgtgatgatgaatttgacgacaccgctt
cagctgaccgacctgctcacctggagactgataggaatacacagatcaccatctggctcg
tctgcctccatccttcactctctgactcgctacagtcgttatctgtccctgttggacctg
gaccagaggacgctgcactgcccgtcatactccggctccctcatcagcagactggccgac
cctaacaccggcatcagccgaggcctcacctacctgctgcacctggagagctgcctgact
gctctggccaaccaggctctgctgtacacgtttcataatgctttacaacgtccaacaact
gctgaagggacggacggttcagggaaagaggacttcctgttcaagcgaggtatctgcagc
agtaagagtgatgtgagggtgatgcatttcctgtctgacctcattaaacagcgccatgca
ggacgtggaccgccggttttaaggttttcttacagtccaattcacctacacagaaataca
catgcagcataa
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