KEGG   Acanthopagrus latus (yellowfin seabream): 119019896
Entry
119019896         CDS       T08233                                 
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b isoform X1
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:alat00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119019896 (smcr8b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:alat04131]
    119019896 (smcr8b)
Membrane trafficking [BR:alat04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    119019896 (smcr8b)
SSDB
Motif
Pfam: Folliculin
Other DBs
NCBI-GeneID: 119019896
NCBI-ProteinID: XP_036954753
LinkDB
Position
1:complement(6583810..6592826)
AA seq 923 aa
MIGSPDLLAFTGTEGFGGGEEDQDAIPEELSVPLLPPSNPWTSSAQFHRDFILVAEFSEQ
VGPKPVLTMPDDPRVIGSFDLNHFSVRIMSVDYQASGPGPVPPPSPGPRLNFSEDSRVIL
GDSAEDAFAYVHHMTLYDLEARGMVRPFCMAYVCSDQAKLMENFCELSTCFSQAADSLKT
GNRQAFSMELQRKLQELEYTQLTLQQARDHPQTANGFTESGEKADELEAVERSISNHRDL
LRQVTSYPNRKLKQPDFLPYDPADTLTDPIALLPPPEPSTSTSTSTSTCRSEHPLKPLEE
LCNAYFLSLMKEQLADTERRLRGDRSMLRTARVTHSLSKRLTPINFLFELWRPEDGDEEE
GDGTEVELRKTTGTKSSVEAFQSEPMSLESFCSCVEEIPIKLEAGEARTVTPDDSVATEM
TGSVSSGDSIEVLGTEKSYRTQHVDTGSDSRAADNSLSSAEALVGMTDTSYRRAAADVGA
RRVRAYAKRANSEDSIEVLSTTESIIPEDLTAIEEEEAEYQSLSNGFGNKEEALTDYKCD
DVLTEEKTLNTTSNERPVQEDDSLIDRYETLKLKSVISEITIKEEQVSEGLSSNQVHEDQ
PEKSTSLLQAEEAVASTPPWPGVHQTVPDLHVNFAPSLTLAEVEQWSRPCAPLRLLSIDE
ASECNSFSGSSEPPTPSRNIPSNTRSNRKRRRRAGLRALRFLKQNSFSQHAVFCLLSGRP
LVVVGGDEGLVRKLVDALSLFLPAPGPEGSAVMMNLTTPLQLTDLLTWRLIGIHRSPSGS
SASILHSLTRYSRYLSLLDLDQRTLHCPSYSGSLISRLADPNTGISRGLTYLLHLESCLT
ALANQALLYTFHNALQRPTTAEGTDGSGKEDFLFKRGICSSKSDVRVMHFLSDLIKQRHA
GRGPPVLRFSYSPIHLHRNTHAA
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgatcgggtcaccggacctgctggccttcaccggcacggagggctttgggggaggagag
gaggaccaggatgcgatacctgaggagttatcggtccccctcttacccccgtctaacccc
tggacctcctccgcccagtttcaccgagacttcattctggtggctgaattctcagagcag
gttggacctaagcctgtgctgacgatgccagatgatcccagagtcattggatcgttcgac
ctcaaccatttctccgttcgcatcatgtctgtggactaccaggcgtccggccccgggccc
gtccctcctccatccccgggcccccgcctcaacttcagcgaggactccagagtgatcctc
ggagattcagcagaggacgcatttgcatacgttcatcacatgaccctgtacgacctggag
gctcgggggatggtgcgtcctttctgcatggcgtatgtgtgctcggaccaggcgaagctg
atggagaacttctgtgaactgtcgacgtgcttctctcaggctgctgacagcctcaagaca
ggaaacagacaagcgttttctatggagctgcagaggaagttacaagagctcgagtacacg
cagttgactctgcaacaggcgagagatcatccgcagacggctaatggcttcacagagtcg
ggagaaaaagcagatgagcttgaagccgtggagcgttcaatctcaaatcatagagacctc
ctccgccaggtcacttcctacccaaacaggaagctgaaacagcctgacttcctgccctac
gacccagctgacaccctcactgatccgattgccttactgcctcctcctgagccctccacc
tccacctccacctccacctccacctgcaggtctgagcatcctctgaagcctctagaggag
ctttgcaacgcctacttcctgtcactaatgaaggagcagctcgctgacacagagcgccgc
ctacgtggcgacaggagcatgctccgaactgctcgtgtcacacattcgttgtccaagaga
ctcacccccatcaacttcctgttcgagctgtggcgcccagaggacggtgatgaggaggag
ggagatggcactgaggtggagctgcggaaaacgacggggacgaagagcagcgtcgaggcg
tttcaatcagaaccgatgagcctggagtcgttttgctcctgtgtggaggagatcccgatc
aaactggaggcaggtgaagctaggactgtgacccctgacgacagtgttgccacggagatg
acaggaagtgtgagcagtggcgacagcattgaagtgcttggaaccgagaagtcttatcgg
acgcagcacgtcgacactggatctgacagcagagcagctgacaattcactctcctcagca
gaagcattagttgggatgacggacacctcctacaggcgagcagcagcggatgtaggcgcc
cggcgtgtgcgagcgtacgccaagcgagccaacagtgaggacagcatcgaagtcctgagc
accaccgagtccatcattcctgaagacctcaccgccatcgaggaggaagaggcggagtac
cagtctctcagtaatggctttggaaataaagaagaggcgctgacggactataaatgtgac
gatgtcctcacggaggagaagactttgaatacaacctcgaatgaacgacctgttcaggag
gatgacagtctcattgacagatacgagaccttaaagctaaaatcagtcattagtgagatt
acaatcaaagaggagcaggtcagtgagggtttgagcagcaatcaggtccatgaagaccaa
cctgagaagtcgaccagtctactgcaagctgaagaagccgtggcctcgacgcctccgtgg
cctggagtccaccagacagtgcctgaccttcatgtgaacttcgccccctctctcaccctg
gcggaggttgaacagtggtctcgtccctgcgctcctctcaggctgctgagcatcgacgag
gcgtctgaatgcaacagcttctctggctcctcagaaccgcccactcccagcagaaatatc
cccagcaacacccgctcaaacaggaagaggaggaggagggctggactcagagccctcagg
ttcctcaaacagaactcgttctcccagcatgctgtgttttgcctcctgagtggccggccg
ctggtggtcgtcggaggagatgagggtttggtcaggaaactggtggatgctctgagtctc
ttcctgcctgctcctggtcctgagggaagtgctgtgatgatgaatttgacgacaccgctt
cagctgaccgacctgctcacctggagactgataggaatacacagatcaccatctggctcg
tctgcctccatccttcactctctgactcgctacagtcgttatctgtccctgttggacctg
gaccagaggacgctgcactgcccgtcatactccggctccctcatcagcagactggccgac
cctaacaccggcatcagccgaggcctcacctacctgctgcacctggagagctgcctgact
gctctggccaaccaggctctgctgtacacgtttcataatgctttacaacgtccaacaact
gctgaagggacggacggttcagggaaagaggacttcctgttcaagcgaggtatctgcagc
agtaagagtgatgtgagggtgatgcatttcctgtctgacctcattaaacagcgccatgca
ggacgtggaccgccggttttaaggttttcttacagtccaattcacctacacagaaataca
catgcagcataa

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