Acanthopagrus latus (yellowfin seabream): 119019943
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Entry
119019943 CDS
T08233
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04137
Mitophagy - animal
alat04141
Protein processing in endoplasmic reticulum
alat04210
Apoptosis
alat04217
Necroptosis
alat04621
NOD-like receptor signaling pathway
alat04622
RIG-I-like receptor signaling pathway
alat04920
Adipocytokine signaling pathway
alat05132
Salmonella infection
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119019943 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119019943 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119019943 (traf2a)
09143 Cell growth and death
04210 Apoptosis
119019943 (traf2a)
04217 Necroptosis
119019943 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119019943 (traf2a)
04622 RIG-I-like receptor signaling pathway
119019943 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119019943 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119019943 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
119019943 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119019943 (traf2a)
04121 Ubiquitin system [BR:
alat04121
]
119019943 (traf2a)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119019943 (traf2a)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119019943 (traf2a)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119019943 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
Sina_ZnF
zf-RING_5
zf-C3HC4_4
zf-RING_6
Tropomyosin
MATH
TRAFD1-XIAF1_ZnF
EFL1
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
119019943
NCBI-ProteinID:
XP_036954832
LinkDB
All DBs
Position
5:complement(2339554..2368053)
Genome browser
AA seq
568 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANSLEDKHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE
FEANHEGNCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLDVASHKLQELHQSLRDLELKMSQVAGGGLAPVQG
ACAPTLATSFTPLPSTFGAALELQLQSEKTKVAELNRRCQELELKVSTFENIVCVLNREM
EHSCTTMEAYNRQHRLDQDKIEILSNKVRQLERTVSLRDLSIVEMDGKMREMSAATYDGI
FVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVV
MRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFC
PLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggaaccgtctccaccatcttccctggaaggcaacaaaccgggcttccca
aagaaaattctggccaacagtctggaagacaagcatctgtgcaattcgtgccagaaaata
ctgagaaggccgttgcaagctcaatgcggtcaccgcttttgttcgttctgtttcaacaaa
attgtgagttctggaccacagaaatgcagcgcttgcattaaagaagacttatttgaggaa
cccacctccattctcaagcaaggtggtgctttccctgacaacgcagctcggagagaagtg
gaggccttggcagctgtctgtccaaatgagggatgcacatggacgggaactatcaaagaa
tttgaggctaaccatgagggcaactgtgacttcatgatcatcctgtgtccttcctgtaaa
gagttgatgagagccaacgaacaggagcgccacaacgagagagaatgtccagagaggacg
ctcaactgcaaatactgcaaagaacccttcctgttaaagaacatcaaggcccatgatgaa
atctgtccaaagtacccaatgatatgtgaaggatgtgcaaagaaaaagatccccagagaa
aagtatgtggaccatattaagttctgcagtaagtttaaagcaccatgccgatttcatgtt
gttggctgcgatacgtctgtggagaaagagaagatccatgaccatgagcggcagtgttca
tatgagcaccttaaccttctcctgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccaaagcctggatgtggccagccacaagctgcaggagctccaccagtccctc
agggatctggagctgaagatgagccaggtggcggggggtggtctagctcccgtgcagggt
gcatgtgcccctacccttgccacctccttcaccccgttaccaagcactttcggtgctgcc
ctggagcttcaactccagagtgaaaagaccaaggtagctgagctgaatcggcgctgccag
gagctagagctcaaagtgagcactttcgagaacatcgtatgtgtcctcaacagagagatg
gagcactcttgcaccaccatggaggcctacaaccgccaacaccgactggaccaggacaag
atcgagatcctcagcaacaaggttcgtcagctagaaaggacagtgagtctgagagacctg
tctattgtggagatggatgggaaaatgagagagatgtctgcagccacatatgacggcatt
tttgtctggaagatctcagatttcaccaagaagaggcaggacgctgtggctggcagagcc
cccgctatgttctctcctgccttttataccagtaaatatggctacaagatgtgtctgcgg
atctacttgaatggtgacgggacgggccgtggcacccacttgtccctgttttttgtggtg
atgagaggacacagcgacgcactcctcaagtggccttttaatcagaaggtcaccctaatg
ctgctcgaccagaacaacagggagcacataattgatgccttccggcccgacatctcctcc
tcatcctttcagaggccagtcagtgatatgaacatcgccagtggttgcccactcttctgt
ccgctttccaagttggactctaaaaactcctacatccgcgacgacaccatcttcatcaag
gccattgtcgacctcactgggctctag
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