Acanthopagrus latus (yellowfin seabream): 119022277
Help
Entry
119022277 CDS
T08233
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119022277 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119022277 (kdm2aa)
04121 Ubiquitin system [BR:
alat04121
]
119022277 (kdm2aa)
03036 Chromosome and associated proteins [BR:
alat03036
]
119022277 (kdm2aa)
Enzymes [BR:
alat01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
119022277 (kdm2aa)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119022277 (kdm2aa)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119022277 (kdm2aa)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119022277 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
119022277 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
PHD
C1_1
Motif
Other DBs
NCBI-GeneID:
119022277
NCBI-ProteinID:
XP_036958863
LinkDB
All DBs
Position
1:complement(32951728..32977205)
Genome browser
AA seq
1252 aa
AA seq
DB search
MDDSKPRYSKRLRAGTRRRYHDDGISDEEIDGRRMFDLEEKVSSQRFSSDRVIRMEGKDL
TYEYVQRGGLRDPIILEKPDGLGLKMPDLDFSVNDVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPSQREKLYNVISLEFSHTKLENLVKRPTTVDLIDWVDNMWPRHLKERQR
DSTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTPQNLE
LYENWVLSGKQGDVFLGDRASECQRIELKQGCTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVPVKFRYPFYYEMCWYVLERYVFSLTKTSYLTPEFQKHSLGIG
LKKPPGAEIASEQVNEEEESHGSDEEASEQQAQKPAVKVHLTPLEVEGMWNLLGKLEALP
SNKKCVPAGIHNAPALITHIKALLKEHTNDNPKLSYTGKPIVRWPKRPSWYQPPPPPPPP
PRPKLATTPIIPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRDMKKFGGPGKL
KQTCVLRQCLSPGLPLSAVCEICKEPNQEESGDSSLTLMECSNCAQIVHPACLMVQGEGL
VNKDLPSCWECPKCVQGITDPESKGDKGEGLSVKRKSSSLLDARMAKIYRRQRHSRDGDD
SASDDDDDDDDDEASQRRKMVLHARGGGHSSRRGFGANRRGLLRGGSAHRGSRGGLLTPG
SSSVLKLKRGMGMRESGRRGRGVRLRGGSRMQRRGDESEESDDDDDDDDDDDDDDEEEED
SEDGGKDRRLRRRRRQRRTDDDEDEDSEGQDFDPEEEEMDTLEEDEEEELEEEEEGHWDS
DPEPPVLLVSDLSDDLLSGSYLTVTLQRPHKAKRQSGSIVPKLEAAMGPRTAAVGAGGQQ
GFIQRKTALSKPSRLKSADATADSMTPRGPGRPRLRGNHGDRGTRDHSGSSSEEEEASAP
SAPFSLSPPSLLSLPSFKDVGNERGGEKEVWVSVFTYLNRAELLACMTVCKAWYKWSCDK
RLWSHVDVSRCSPLTNQALAGIIKRQPTSLDLSWTPLAKRQLNCLLTRLPGLRELRVTGL
SWSCLSALVSPTLPCLRLLDLRWCEGLKDTQIKEIISPPGSESSRSRLRNMITLRLSGLD
ISESTLRLLQRHMPQLERLDLAHCKDITDSSITLLAAAGTHTRNNLTELTLAGCSELTDG
CLSYLKRLSALTLLDLRGCKSISRRACDAFISDLSHVSLFCMMEEKLIQRID
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcgaagccacggtacagcaaaaggctgcgggccggcacccggcgccgttac
catgatgatggcatctcagatgaggagatagatggacggaggatgtttgacctggaggaa
aaagtcagcagtcagaggttcagctctgaccgggttattcgcatggagggaaaagacttg
acatatgagtacgtccagagaggtggcctgagggaccccatcatccttgagaagcctgat
ggactgggactaaagatgcctgatcttgatttcagtgtcaatgatgtcaagatgtttgtt
ggtagcagacgtatgatagatgtgatggacgtgagcactcagaaagggacagagatgtcc
atggctcagtggacacgttactacgagacccctccgtctcagagagagaagctatataat
gtcatcagcttggagttcagccataccaagctggagaacctggtcaagagacctaccaca
gtagatctaatagattgggtggacaacatgtggcctcgtcacctgaaagagagacagaga
gactccaccaactccatcaatgacatgcagtaccctaaagtgcagaaatactgtctgatg
agtgtcgagggctgctacacagactttcacatcgactttggagggacatcggtgtggtac
cacatattgagaggaagcaaggtgttctggctgatccctcccacccctcagaacctggag
ctgtatgagaactgggtgttgtcggggaaacagggagatgttttcctcggagaccgtgca
tctgaatgccagaggatcgaactgaagcagggttgcaccttcatcataccctcaggttgg
attcatgccgtctacaccccagtggactctatggtgtttggtggcaacttcctacacagt
ttcaacatcccaatgcaacttaacatttgtaatatagaggacagaacacgggttccagta
aagtttcggtaccccttctattacgagatgtgctggtacgtgttggagcgctatgtattc
agcctaaccaagacctcctacctaacaccagaatttcagaaacactcccttggcatcggt
ctgaagaagccgcctggtgctgaaatagccagtgagcaggtaaatgaggaggaggagtct
catggcagtgatgaagaggcctcagagcagcaggctcaaaagcctgcagttaaagttcat
ctgactccccttgaggtagagggaatgtggaacctgttgggtaaacttgaggctctgccc
tccaataagaagtgtgtcccagcgggaatacacaacgcaccggccctcatcacacacatc
aaggctctactaaaggagcacaccaatgacaatcccaaactgtcctacacaggaaaaccc
attgtcagatggccaaagagaccctcatggtaccagcctcctcctcctccaccgcctccg
cctcgccctaaattggccaccactcccatcatcccacgaccacagaaaccggcttcctcc
atgtctgtcctgagacggcgcagggtcaggtgtaagcgctgtgaagcctgtatgagacca
gaatgtggagactgtaacttctgcagagacatgaagaagtttggaggaccagggaagctt
aagcagacctgtgtgctacgacagtgtctctctccgggacttcctctgtctgcagtgtgt
gagatctgcaaggagcccaatcaggaggaaagtggagactcctccctcactctgatggag
tgttctaactgtgcacagatagtccaccctgcctgcctcatggtacagggtgaaggactg
gtgaataaagacctgcccagctgttgggagtgtccaaagtgtgtccaagggatcactgat
ccagagtcgaaaggagacaaaggtgaaggcctgtcagtgaagcggaaatcttcctccctg
ctggatgctcgaatggctaagatttacagacgacagagacacagccgagatggagatgat
tctgccagtgatgatgatgatgatgatgatgatgatgaagcatctcagagaagaaagatg
gtactccatgcacgaggggggggacactcttctaggaggggctttggtgccaacaggaga
ggcctgctgagagggggctcggcccacagaggaagcaggggaggcctcttgactcctggc
tcctcctccgtcctcaagcttaagcgagggatgggcatgagagagagtggacgaaggggg
cgaggggtgaggctgcggggaggctccaggatgcagcgaagaggagacgagtccgaagag
tcagacgatgatgatgacgatgacgacgatgacgatgacgatgacgaagaagaggaggac
agtgaagacggaggcaaagatagacggcttcgtcgacgtaggaggcagcgcaggactgat
gatgatgaagatgaggacagtgaggggcaggactttgaccctgaagaggaggagatggac
acgctggaagaagatgaggaggaggagttggaggaagaggaggaaggacactgggattca
gacccggaacccccagtcctcctggtgtctgatctgagtgatgacctgctgagtggctcc
tatctgactgtcactctacagcgcccccataaggccaagagacaatctggctccatagtt
ccaaagctagaagcagcgatgggtccgaggacagctgcagtgggtgctggtggtcagcag
ggcttcattcagagaaagacagctctttccaagccttcacgtctcaagagtgctgacgcc
acagctgacagcatgaccccgagaggacctggcaggccgcgtctgcgtggtaaccatggc
gacagaggcactagagatcactctggatcttcttcagaggaagaggaagcttctgctcct
tctgcacccttctccctgtctcccccatccctgctgtctctgccttcttttaaggatgta
ggcaatgagaggggaggagagaaggaggtctgggtgtcagtgttcacatacttgaataga
gctgagctgcttgcctgcatgactgtctgtaaggcctggtacaagtggagctgtgacaag
cgtctgtggagccatgtggacgtgagtcgctgcagtccgctcactaaccaggcgctggca
ggcatcatcaaacgccaacccacctctctggatctgtcctggactcctctagccaagaga
caactcaactgtctgctcaccaggctcccaggtctgagggaattgagggtgactggtctg
tcctggtcctgtctgtcagccctggtctccccaactctgccctgcctgcggctgctggat
ctgcgctggtgtgaaggccttaaagacacccagatcaaagagataatcagcccgcctggt
tctgagtcatctcgcagcagactgaggaacatgattacacttcgtctttctggcctggat
atcagtgagtccactctgaggctactgcagcgccacatgccacagctggagaggcttgac
ctggctcactgcaaagacataacggactcatccatcactctgctggcagcagctgggacc
cacacccgcaacaacctcactgaactcacactggcaggttgcagtgagctgactgatggc
tgcctgtcctacctgaagcgtctctcagctctgactctactggacctcagaggctgtaag
agcatcagcagacgagcctgtgatgccttcatctctgacctgtcccacgtctccctcttc
tgtatgatggaggagaagctcatccagcgcatagactaa
DBGET
integrated database retrieval system
