Acanthopagrus latus (yellowfin seabream): 119022277
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Entry
119022277 CDS
T08233
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119022277 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119022277 (kdm2aa)
04121 Ubiquitin system [BR:
alat04121
]
119022277 (kdm2aa)
03036 Chromosome and associated proteins [BR:
alat03036
]
119022277 (kdm2aa)
Enzymes [BR:
alat01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
119022277 (kdm2aa)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119022277 (kdm2aa)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119022277 (kdm2aa)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119022277 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
119022277 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
LRR_FBXL15
F-box
Cupin_8
PHD
C1_1
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
119022277
NCBI-ProteinID:
XP_036958863
LinkDB
All DBs
Position
1:complement(32951728..32977205)
Genome browser
AA seq
1252 aa
AA seq
DB search
MDDSKPRYSKRLRAGTRRRYHDDGISDEEIDGRRMFDLEEKVSSQRFSSDRVIRMEGKDL
TYEYVQRGGLRDPIILEKPDGLGLKMPDLDFSVNDVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPSQREKLYNVISLEFSHTKLENLVKRPTTVDLIDWVDNMWPRHLKERQR
DSTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTPQNLE
LYENWVLSGKQGDVFLGDRASECQRIELKQGCTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVPVKFRYPFYYEMCWYVLERYVFSLTKTSYLTPEFQKHSLGIG
LKKPPGAEIASEQVNEEEESHGSDEEASEQQAQKPAVKVHLTPLEVEGMWNLLGKLEALP
SNKKCVPAGIHNAPALITHIKALLKEHTNDNPKLSYTGKPIVRWPKRPSWYQPPPPPPPP
PRPKLATTPIIPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRDMKKFGGPGKL
KQTCVLRQCLSPGLPLSAVCEICKEPNQEESGDSSLTLMECSNCAQIVHPACLMVQGEGL
VNKDLPSCWECPKCVQGITDPESKGDKGEGLSVKRKSSSLLDARMAKIYRRQRHSRDGDD
SASDDDDDDDDDEASQRRKMVLHARGGGHSSRRGFGANRRGLLRGGSAHRGSRGGLLTPG
SSSVLKLKRGMGMRESGRRGRGVRLRGGSRMQRRGDESEESDDDDDDDDDDDDDDEEEED
SEDGGKDRRLRRRRRQRRTDDDEDEDSEGQDFDPEEEEMDTLEEDEEEELEEEEEGHWDS
DPEPPVLLVSDLSDDLLSGSYLTVTLQRPHKAKRQSGSIVPKLEAAMGPRTAAVGAGGQQ
GFIQRKTALSKPSRLKSADATADSMTPRGPGRPRLRGNHGDRGTRDHSGSSSEEEEASAP
SAPFSLSPPSLLSLPSFKDVGNERGGEKEVWVSVFTYLNRAELLACMTVCKAWYKWSCDK
RLWSHVDVSRCSPLTNQALAGIIKRQPTSLDLSWTPLAKRQLNCLLTRLPGLRELRVTGL
SWSCLSALVSPTLPCLRLLDLRWCEGLKDTQIKEIISPPGSESSRSRLRNMITLRLSGLD
ISESTLRLLQRHMPQLERLDLAHCKDITDSSITLLAAAGTHTRNNLTELTLAGCSELTDG
CLSYLKRLSALTLLDLRGCKSISRRACDAFISDLSHVSLFCMMEEKLIQRID
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcgaagccacggtacagcaaaaggctgcgggccggcacccggcgccgttac
catgatgatggcatctcagatgaggagatagatggacggaggatgtttgacctggaggaa
aaagtcagcagtcagaggttcagctctgaccgggttattcgcatggagggaaaagacttg
acatatgagtacgtccagagaggtggcctgagggaccccatcatccttgagaagcctgat
ggactgggactaaagatgcctgatcttgatttcagtgtcaatgatgtcaagatgtttgtt
ggtagcagacgtatgatagatgtgatggacgtgagcactcagaaagggacagagatgtcc
atggctcagtggacacgttactacgagacccctccgtctcagagagagaagctatataat
gtcatcagcttggagttcagccataccaagctggagaacctggtcaagagacctaccaca
gtagatctaatagattgggtggacaacatgtggcctcgtcacctgaaagagagacagaga
gactccaccaactccatcaatgacatgcagtaccctaaagtgcagaaatactgtctgatg
agtgtcgagggctgctacacagactttcacatcgactttggagggacatcggtgtggtac
cacatattgagaggaagcaaggtgttctggctgatccctcccacccctcagaacctggag
ctgtatgagaactgggtgttgtcggggaaacagggagatgttttcctcggagaccgtgca
tctgaatgccagaggatcgaactgaagcagggttgcaccttcatcataccctcaggttgg
attcatgccgtctacaccccagtggactctatggtgtttggtggcaacttcctacacagt
ttcaacatcccaatgcaacttaacatttgtaatatagaggacagaacacgggttccagta
aagtttcggtaccccttctattacgagatgtgctggtacgtgttggagcgctatgtattc
agcctaaccaagacctcctacctaacaccagaatttcagaaacactcccttggcatcggt
ctgaagaagccgcctggtgctgaaatagccagtgagcaggtaaatgaggaggaggagtct
catggcagtgatgaagaggcctcagagcagcaggctcaaaagcctgcagttaaagttcat
ctgactccccttgaggtagagggaatgtggaacctgttgggtaaacttgaggctctgccc
tccaataagaagtgtgtcccagcgggaatacacaacgcaccggccctcatcacacacatc
aaggctctactaaaggagcacaccaatgacaatcccaaactgtcctacacaggaaaaccc
attgtcagatggccaaagagaccctcatggtaccagcctcctcctcctccaccgcctccg
cctcgccctaaattggccaccactcccatcatcccacgaccacagaaaccggcttcctcc
atgtctgtcctgagacggcgcagggtcaggtgtaagcgctgtgaagcctgtatgagacca
gaatgtggagactgtaacttctgcagagacatgaagaagtttggaggaccagggaagctt
aagcagacctgtgtgctacgacagtgtctctctccgggacttcctctgtctgcagtgtgt
gagatctgcaaggagcccaatcaggaggaaagtggagactcctccctcactctgatggag
tgttctaactgtgcacagatagtccaccctgcctgcctcatggtacagggtgaaggactg
gtgaataaagacctgcccagctgttgggagtgtccaaagtgtgtccaagggatcactgat
ccagagtcgaaaggagacaaaggtgaaggcctgtcagtgaagcggaaatcttcctccctg
ctggatgctcgaatggctaagatttacagacgacagagacacagccgagatggagatgat
tctgccagtgatgatgatgatgatgatgatgatgatgaagcatctcagagaagaaagatg
gtactccatgcacgaggggggggacactcttctaggaggggctttggtgccaacaggaga
ggcctgctgagagggggctcggcccacagaggaagcaggggaggcctcttgactcctggc
tcctcctccgtcctcaagcttaagcgagggatgggcatgagagagagtggacgaaggggg
cgaggggtgaggctgcggggaggctccaggatgcagcgaagaggagacgagtccgaagag
tcagacgatgatgatgacgatgacgacgatgacgatgacgatgacgaagaagaggaggac
agtgaagacggaggcaaagatagacggcttcgtcgacgtaggaggcagcgcaggactgat
gatgatgaagatgaggacagtgaggggcaggactttgaccctgaagaggaggagatggac
acgctggaagaagatgaggaggaggagttggaggaagaggaggaaggacactgggattca
gacccggaacccccagtcctcctggtgtctgatctgagtgatgacctgctgagtggctcc
tatctgactgtcactctacagcgcccccataaggccaagagacaatctggctccatagtt
ccaaagctagaagcagcgatgggtccgaggacagctgcagtgggtgctggtggtcagcag
ggcttcattcagagaaagacagctctttccaagccttcacgtctcaagagtgctgacgcc
acagctgacagcatgaccccgagaggacctggcaggccgcgtctgcgtggtaaccatggc
gacagaggcactagagatcactctggatcttcttcagaggaagaggaagcttctgctcct
tctgcacccttctccctgtctcccccatccctgctgtctctgccttcttttaaggatgta
ggcaatgagaggggaggagagaaggaggtctgggtgtcagtgttcacatacttgaataga
gctgagctgcttgcctgcatgactgtctgtaaggcctggtacaagtggagctgtgacaag
cgtctgtggagccatgtggacgtgagtcgctgcagtccgctcactaaccaggcgctggca
ggcatcatcaaacgccaacccacctctctggatctgtcctggactcctctagccaagaga
caactcaactgtctgctcaccaggctcccaggtctgagggaattgagggtgactggtctg
tcctggtcctgtctgtcagccctggtctccccaactctgccctgcctgcggctgctggat
ctgcgctggtgtgaaggccttaaagacacccagatcaaagagataatcagcccgcctggt
tctgagtcatctcgcagcagactgaggaacatgattacacttcgtctttctggcctggat
atcagtgagtccactctgaggctactgcagcgccacatgccacagctggagaggcttgac
ctggctcactgcaaagacataacggactcatccatcactctgctggcagcagctgggacc
cacacccgcaacaacctcactgaactcacactggcaggttgcagtgagctgactgatggc
tgcctgtcctacctgaagcgtctctcagctctgactctactggacctcagaggctgtaag
agcatcagcagacgagcctgtgatgccttcatctctgacctgtcccacgtctccctcttc
tgtatgatggaggagaagctcatccagcgcatagactaa
DBGET
integrated database retrieval system
