Acanthopagrus latus (yellowfin seabream): 119022409
Help
Entry
119022409 CDS
T08233
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alat04812
]
119022409
Cytoskeleton proteins [BR:
alat04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
119022409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
HEAT_2
Nipped-B_C
PriA-like_WH
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
119022409
NCBI-ProteinID:
XP_036959113
LinkDB
All DBs
Position
7:complement(12703685..12730809)
Genome browser
AA seq
733 aa
AA seq
DB search
MMAPEPLKSAITCPVVEDTSLALPSDKGLRSGQQRVLDQVHTIKRSKSKQGKNGALTPSP
TSPGPASLTTYDFASFRFAPSKPNGTIHRSISSGYSKSFNNQKSRTLSSRTAGGRHVSSS
TWEQQMNASTWPKSPNGLKPSRSDPALAPAFSVAPAPVSPSAQIMRAKGQTVQNQQTVQN
QQTFQSTRASRHSTYSVTNGSQLNNSQLTNSQTRMVRPPSTVSQTDGRMGTIKTSKFEQQ
SAVNSAVNMSDLTLKEAVEYLSHPEENYQQCGATFIQHTTYKEEHAKQEVSELGGIPTLV
TLLRSSSPGVNQAAAGALRNLVFKHQGNKLEVQHCSGIAKALQLLKETDSTETQKQITGL
LWNLSSADELKGELIATALPVLTDNVVVPFTCWSDSSANNNIHPDVFYSATGCLRNLSCA
QKSERQAMRDCRGLIDSLMSYIQSCVAEDNPDDKSVENCVCILHNLTYQLESESPECFSK
FLPKADAQAGKKSPTIGCFSPKAGKAQKEFTFDASQGTLDNSAPSGVKWLSHPSAMQTYL
SLLSTSQKDATLEASCGALQNLTASKGLGSSAMSQILVQKLGALAHMSSLLKSPNRSLQK
TVMSLMGNMSRSSNLQTSMAKQMLPELTSLLANPQDLGNSDETIASTCSTVRTLMAADPE
ITKKVISNELVSSLGDLSENGSFPKGSKAASMLLYSLWNEKNLQGPLKKLGFNKSLFINE
NTTAVHRSMQVIE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggagccgctgaaatccgccataacgtgcccggtcgtggaggacacttcg
ctcgcgctgccctccgacaaagggctgcgctcgggacagcagcgcgtgctggatcaggtg
cacaccatcaagaggagcaagtccaagcaggggaagaacggcgcgctgaccccctccccg
acaagcccgggtcctgcatcactgacaacatacgactttgcatcgttcaggtttgctcca
tccaaaccgaatggcaccatccaccgctccatatcgtcaggctacagcaaatcgttcaac
aatcagaagagtcgcactctatccagcagaaccgcaggaggaagacacgtctcctccagc
acatgggaacagcaaatgaatgcctccacctggcccaagagtcccaatgggctgaaaccc
agtcgcagtgaccccgccttggctcctgcattttcagttgctcctgctcctgtcagtccg
tctgctcagattatgagagcaaaggggcagactgtccaaaaccagcagactgtccaaaac
cagcagacattccagagtactcgagcaagcagacacagcacctattctgtcaccaacggc
tctcagctgaacaacagccagctgaccaacagccagacacgcatggttcgaccgccctca
accgtgtctcagactgacggcaggatgggaaccatcaaaacatctaagttcgagcagcaa
tcagcagtgaacagcgcggtgaacatgtcagacctgaccctgaaggaggctgtggagtat
ctgtctcaccctgaggagaattaccagcagtgtggagccaccttcatccaacacaccacc
tacaaagaggagcatgccaaacaggaggtttctgaactcggaggaatccccactctggtc
accctgctgcggagctccagtcccggggtgaaccaggctgctgccggggctctgaggaac
ctggtgttcaagcaccagggcaacaagctggaggtgcagcactgcagcggtatagctaag
gccctgcagctactgaaggagaccgattctactgagacccagaaacaaatcactggactg
ctgtggaacctgtcctccgccgatgagctgaagggtgaactgatagctacagctctgcct
gttctgactgacaatgtggtggtgccattcacctgctggtcagacagcagcgccaacaac
aacatacaccctgatgtcttctacagtgccacagggtgcctgcggaacctgagctgtgcc
caaaagagtgaaaggcaggcgatgagagactgccgtgggctcattgactccctcatgagt
tacatccagtcatgtgtggcagaggacaaccctgatgacaagtctgtggagaactgtgtc
tgcatcctccacaacctgacctaccaactggagtcggagtcccctgagtgcttcagcaag
ttcctcccaaaggcagacgctcaagctggaaagaaaagccccacgatcggatgtttcagc
cccaaggcaggcaaggctcagaaggagtttacattcgatgcatctcaggggactctagac
aacagcgccccatcaggtgtgaagtggttgtcccacccatcagccatgcagacctacctg
tctctgctgagcacgtcccagaaagatgccaccctggaagcctcctgcggcgccctccag
aatctcactgccagcaaaggactgggctccagtgctatgagccagattctggttcagaag
ttgggggctctggctcacatgtcctctcttctaaagtctcctaaccgcagcctgcagaag
acggtcatgtccctgatgggcaacatgtcccggagcagcaatttgcagacctccatggca
aagcagatgttgcctgagctcaccagcctcctcgctaacccccaggatttgggaaactct
gacgagactatagcgtcaacttgcagcacagtccggactctgatggcggctgaccctgaa
atcaccaagaaggtcatcagtaatgaactggtgtcatcactgggagacctcagcgagaac
gggtctttccccaaaggcagcaaagcagcctccatgctgctctacagcttatggaacgag
aagaatttgcagggtcccctgaaaaagctgggcttcaacaaatcgctttttatcaacgaa
aacaccacagcagtgcacaggtcgatgcaagtcatcgagtga
DBGET
integrated database retrieval system
