Acanthopagrus latus (yellowfin seabream): 119024326
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Entry
119024326 CDS
T08233
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119024326 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alat03400
]
119024326 (nthl1)
Enzymes [BR:
alat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119024326 (nthl1)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119024326 (nthl1)
Prokaryotic type
119024326 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
MMTV_SAg
Motif
Other DBs
NCBI-GeneID:
119024326
NCBI-ProteinID:
XP_036962906
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All DBs
Position
1:23032801..23039273
Genome browser
AA seq
423 aa
AA seq
DB search
MFYASSSTRVCYVAHCFTMTSPYFTQRTVITRSGNQNAGCTPLASLGSKLTDRRPNVGRV
SSAAVKEEEEEAKVSEPRPSSVNLSEGGCPEPLRHSTAHPKTETDTVPLSSHGRRRRQLK
VEYDETDGVTPVKTEHWEPPDWKKQLGYIREMRSGRDAPVDNMGAEKCYDTGAPAHVRRF
QVLVSLMLSSQTKDQVTAAAMQKLRAHGCTVENILATDDDTLGKLIHPVGFWRTKVKYLK
LTSAMLQKEFGGDIPDSVEGLVSLPGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISNRLG
WLKKPTKNPEETRKALEQWLPRELWSEINWLLVGFGQQVCLPINPLCSVCLNQHSCPSAH
KNSPAKRPKAGSPRSPSPTSPFKTKTEPEQDSTVYNRRTKKEPLSTPISPTIQRRRQKSK
VNH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcaagcagcagcacgagggtctgttatgtagcccattgtttcacaatgact
tctccttatttcacgcagaggactgttatcactcggagtgggaaccaaaatgccggctgc
actcctttggcctccctcgggtccaaacttaccgacagacggccgaatgtgggacgggtc
tcctctgcggcggtgaaagaggaggaggaggaggcgaaggtctccgagccaagaccctcc
tcggtcaacttatcagagggtggttgccctgaacccctccgccacagcacagctcatcca
aaaacagaaacagacactgtaccgctgtcttcgcacggccgcaggaggagacagctgaag
gtggaatatgatgagactgacggtgttacaccggtgaagacagagcactgggaacctcct
gactggaagaaacaattagggtacatccgtgagatgagaagtggccgtgatgcacctgta
gacaacatgggagcggagaaatgctacgacaccggggcccctgcacatgtgagacgtttc
caggtgttggtctcactcatgctgtctagtcaaaccaaggaccaggtgacagcagccgct
atgcaaaagctccgagctcacggatgcactgtagagaatatactcgctactgatgatgac
acactgggaaagctcatccaccctgtcggcttctggaggactaaggtgaagtatctgaag
ctgacatcggccatgctgcagaaggagtttggcggggacatcccagacagcgtggagggg
ctggtcagcctgcctggagtcggacctaagatggctcacctggcaatggacatcgcctgg
gaccaggtgtctggcattggcgtggacacacatgtgcatcgtatctccaataggctgggc
tggctcaagaaaccaacaaagaacccagaggagacacgtaaagccctggagcaatggtta
cccagggagctgtggagtgagatcaactggctgctcgtgggtttcggacagcaggtttgc
ctccccatcaacccactttgctctgtgtgtctgaaccagcacagctgtccctctgcccac
aagaactctcctgcaaagaggcctaaagctggatctccacgatctccaagtccaacgtct
ccttttaaaacaaaaactgaacctgagcaggattccactgtttacaacaggaggacaaag
aaggagccactgtccacacctatttcccccaccatccagaggaggaggcagaaaagtaaa
gttaatcattga
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