Acanthopagrus latus (yellowfin seabream): 119025068
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Entry
119025068 CDS
T08233
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03272
Virion - Hepatitis viruses
alat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119025068 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119025068 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119025068 (ldlrb)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119025068 (ldlrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
Vgb_lyase
EGF
Psg1
TMEM154
hEGF
Motif
Other DBs
NCBI-GeneID:
119025068
NCBI-ProteinID:
XP_036964289
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Position
1:17171449..17183985
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AA seq
872 aa
AA seq
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MFEMWRGLSGLSTCWCLLMLIHFWAQADAAYICSSSQLKCGNGRCITRRWICDGSDDCGD
GTDELPETCASKTCSQTQFNCGLPMNQCVPQSWHCDGKADCDNGADEKNCTTKQCKTDEF
RCANGQCISSSFVCDKDDDCSDGSDEASCPKPTCSSRSFQCNNSVCVPALWRCDGDKDCG
DGSDEENCDGQQQHKTAVPCSVHEFQCASGECIHGSWRCDGGMDCQDHSDEYNCSHPTCR
PDEFQCNDGTCIHGSRQCDGEHNCRDLSDEIDCHRENVCEGPTMFKCHSGECISMEKVCN
KQRDCRDWSDEPVKECDKNECLTGNGGCSHQCTDLKVGFNCSCPAGYSLQMDKKTCEDVD
ECTDPDTCSQICINLPGSYKCDCEEGYEIDPVTKTCKAESGTVPTLYFTNRHEVRKLTVD
RSEYVRLIPELKNAVALDIDMPNKIIYWSDLLLKKIYSSKMDVAGDSSHHTVVIDSGIEA
PEGIAVDWIHGNIYWTDSILKTISVATTDGSKRKNLITDNLEKPRAIVVDPVNNFMYWTD
WGEEAKIEKSGLNGADRVALVTDNIMWPNGITLDMVNHRLYWVDSKMHTLSSIDVNGGTR
HSLIFDEEKLSHPLSLTVFEEKVFWTDMSNSAVFSANRLTGKDITKLAMDLDQPEDIVLY
HNLKQPNGTNWCRESNSVNGGCEFLCLPAPLINEHSPKFTCACPDGMAMGPDMRKCVTEA
PVAPPVEDKTGAPLPPKDTAKPSTPSQPAPTTITTTTATTRAARKPTTTMQSTQQPAATG
QGNRLAALPEEAPSSHPMALYIVVPIVVMALLVFGAVFLWRHWRLKNTNTIHFDNPVYQK
TTEDELHICRNSSDGYVYPQRQMLSMEDMDVA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagatgtggaggggactcagcggactgtccacatgctggtgtctgctgatgctg
attcacttttgggctcaagcagatgcagcctacatctgcagctcctctcagttaaagtgt
ggaaatgggaggtgcatcacccgtagatggatctgtgatggaagtgatgactgtggcgat
ggaactgatgaactgcccgaaacctgtgcatccaaaacctgctcacagacacagttcaac
tgtggcctccccatgaaccagtgtgtcccgcagagctggcactgtgacggcaaagctgac
tgtgacaacggggctgatgagaagaactgcacgaccaaacaatgcaaaactgatgagttc
agatgtgccaacggccagtgtatatcctcctccttcgtttgcgacaaggacgacgactgc
tcagatggctcggacgaggcttcctgccccaaacccacctgcagctcccggtctttccag
tgcaacaactcggtgtgtgtgccagctttgtggcgctgcgacggagacaaagactgcggc
gacgggtctgacgaggagaactgtgacggacagcagcagcacaagacagcagtgccctgc
agcgtccacgagtttcaatgtgctagtggggaatgcatccacggaagctggcggtgtgac
gggggcatggactgccaggatcattcggatgagtacaactgcagtcatcctacttgtcgt
ccagatgagttccagtgtaatgacggcacctgcatccatggtagccgccagtgtgacgga
gagcacaactgcagggacctcagcgatgagattgactgccacagagaaaatgtatgtgaa
ggccccaccatgttcaagtgtcacagcggggagtgtatcagcatggagaaagtgtgcaac
aaacagagagactgccgggactggtccgatgagcctgtcaaagagtgtgacaaaaacgag
tgtttgaccggaaatggcggttgctcccatcaatgcaccgatttgaaggtgggcttcaac
tgctcctgccctgctggatacagcctgcagatggacaagaagacctgtgaagacgtcgat
gaatgcactgatccggacacctgcagtcagatttgcatcaacctgcccggcagctacaag
tgcgattgtgaggaaggctacgaaatcgacccggtgaccaagacgtgcaaggctgaatcg
ggaactgtacccaccctctatttcaccaatcggcacgaggtgaggaagctgacagtggac
cgcagcgagtatgtccgactgatccccgagctgaagaacgcggtggctctggacattgac
atgcctaacaagatcatctactggtctgacctgctcctgaagaaaatctacagctccaag
atggacgtggccggtgactcctcccaccacactgtagtaattgacagtgggatcgaggcc
ccggagggcattgctgtggactggatccatggcaacatctactggaccgacagcattctg
aagacgatctctgtggcaacgacagacggcagcaagaggaagaacctgatcacagacaac
ctggagaagccgagagccatcgtagtcgaccccgtgaataacttcatgtactggacagac
tggggtgaggaggctaagatagagaagagtgggttgaatggagcggatcgcgttgcctta
gtaacagataacatcatgtggcccaatggcatcaccctagacatggttaaccatcgcctg
tactgggtggactccaagatgcacacgctgtccagcattgatgtgaacggagggacgcgt
cacagtctcatttttgacgaggaaaagctctcccaccccctctctctgactgtgtttgag
gagaaagtgttttggacagatatgagcaacagtgctgttttcagtgccaaccgcctgaca
ggaaaagacatcaccaagctggcaatggacctggaccagccagaggacatcgtactgtac
cacaacctcaagcagccgaacggcacaaactggtgcagagagagtaacagtgtgaatgga
ggctgtgagttcctgtgcctccccgcccctctgatcaacgagcactcgcctaaattcacc
tgtgcctgtcctgacggcatggccatgggacctgacatgaggaagtgtgtgacagaggct
ccagttgcccctcctgttgaagacaaaactggtgcaccgctcccgccgaaagataccgcc
aagccttctacgcccagccagcctgcccccaccaccatcactacaactacagctaccacc
agagcggccaggaaacccacaacgaccatgcagagcacgcagcagcctgctgccactggc
caaggtaacagattggcagccctgcctgaagaagccccttcatcccaccccatggctctc
tacatcgtggtgccaatagtggtcatggccctgctggtctttggggcagtgttcctctgg
agacattggcgtctgaagaacaccaacaccatccactttgacaaccccgtgtaccagaaa
accaccgaggatgagctccacatttgcaggaacagctcagatggctatgtttatcctcag
agacaaatgctgagcatggaggacatggatgttgcatga
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