KEGG   Acanthopagrus latus (yellowfin seabream): 119026733
Entry
119026733         CDS       T08233                                 
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04145  Phagosome
alat04514  Cell adhesion molecules
alat04672  Intestinal immune network for IgA production
alat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119026733
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119026733
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119026733
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119026733
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alat04147]
    119026733
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119026733
  Exosomal proteins of epithelial cells
   119026733
  Exosomal proteins of breast milk
   119026733
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 C2-set_3 Ig_3 Enolase_like_N
Other DBs
NCBI-GeneID: 119026733
NCBI-ProteinID: XP_036967155
LinkDB
Position
10:complement(376492..379772)
AA seq 249 aa
MDSSFLSFSLLFISLWTADGFMEMVVTRCDFNSTDLNDIEFIDSYIYNKLEYSRFSSRVG
EFVGFTEYGVKNAEAWNKDKSILAQERAEKERYCKNNVGNEYNYALTQSVKPYVRLQSVT
PSSGKHQSMLVCSVFDFYPKLIKVSWTRDGQEVTSDVTSTDELADGDWYYQIHSHLEYTP
RSGEKISCVVEHISLKEPLVTDWDPSMPESERNKIAIGASGLILGLILSLAGFIYYKTKA
RGRILVPSN
NT seq 750 nt   +upstreamnt  +downstreamnt
atggattcatccttcctcagcttctccctcctcttcatcagcctctggacagcagatgga
ttcatggagatggtagtgacccgttgtgattttaactccactgatctgaacgacatcgag
ttcatcgactcgtacatctacaacaagttggagtacagcaggttcagcagcagagttgga
gagtttgttggattcactgagtacggagtgaagaacgcagaggcctggaacaaagacaag
tcaatcctggctcaggagagagctgagaaggagagatactgtaagaacaatgttgggaat
gagtacaattatgctctgactcagtcagttaagccgtacgtcaggcttcagtcggtgacg
ccctcctctgggaaacatcagtccatgttggtctgcagcgtcttcgacttctaccccaaa
ctgatcaaagtgagctggaccagagacggacaggaagtcacctccgatgtcacttccact
gatgagctggcagacggtgattggtactaccagatccactctcacctggagtacacgccc
aggtctggagagaagatctcctgtgtggtggagcacatcagcctgaaggaacctctggtg
acggactgggacccgtccatgcctgagtctgagagaaacaagatcgccatcggagcgtct
ggactgatcctgggtctgatcttatctctggctggattcatctactacaagaccaaggcc
cgaggaaggattctggtccccagtaactga

DBGET integrated database retrieval system