Acanthopagrus latus (yellowfin seabream): 119026734
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Entry
119026734 CDS
T08233
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
KO
K06752
MHC class II antigen
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04145
Phagosome
alat04514
Cell adhesion molecules
alat04672
Intestinal immune network for IgA production
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119026734
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119026734
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
119026734
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119026734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119026734
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119026734
Exosomal proteins of epithelial cells
119026734
Exosomal proteins of breast milk
119026734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
ig
I-set
MOV-10_Ig-like
Motif
Other DBs
NCBI-GeneID:
119026734
NCBI-ProteinID:
XP_036967159
EnsemblRapid:
ENSALTG00010013267
LinkDB
All DBs
Position
10:complement(381399..391769)
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AA seq
239 aa
AA seq
DB search
MMKMMKMMVVLVLSCVLSVSADVLHQDIAVTGCSASDGEDMYGLDGEVMWYADFKNKKGV
EPVPDFVGITYEEGTYQQAEANQQICRTNLENHRKAFKDFPLESDPPSSPVIYPRDEVEL
EVKNTLICHVTGFFPAPVKFSWTKNGQKVTEGTSVNVPFVNKDFTFNQFSKLDFTPQQGD
IYSCSVTHPALTEPQTRMWDVEKTLPGVGPAVFCGLGLTVGLLGVAAGTFFLIKGNECR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagatgatgaagatgatggtggtcctcgtcctctcctgtgtcctcagtgtctca
gctgatgttcttcatcaggacattgctgtcactggctgttcagcctctgatggagaggac
atgtacggtctggatggtgaagtgatgtggtacgcagacttcaagaacaagaaaggagtc
gagcctgttcctgactttgtagggattacctacgaggaaggaacttatcaacaagctgag
gctaatcaacagatctgcagaaccaacctggaaaaccatcgtaaagccttcaaggacttc
cccctggagtcagatcctccctccagtccggtcatctaccccagagacgaggtggagctg
gaagtgaagaacaccctgatctgtcatgtgactgggttctttcctgctcctgtgaagttc
tcctggaccaagaacggacagaaggtgacggaaggaaccagcgtcaacgttccctttgtc
aataaagatttcaccttcaaccagttctccaaactggacttcaccccccaacaaggagac
atctacagctgctcagtgacccatccagccctgacggagccacagaccaggatgtgggat
gtggagaagactctgcccggtgttggacctgcagtgttctgtggactgggtctgactgtg
ggtctgctcggtgtggctgctggaaccttcttcctcatcaaaggaaacgagtgcagatga
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