KEGG   Acanthopagrus latus (yellowfin seabream): 119026734
Entry
119026734         CDS       T08233                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04145  Phagosome
alat04514  Cell adhesion molecules
alat04672  Intestinal immune network for IgA production
alat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119026734
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119026734
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119026734
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119026734
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alat04147]
    119026734
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119026734
  Exosomal proteins of epithelial cells
   119026734
  Exosomal proteins of breast milk
   119026734
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig I-set MOV-10_Ig-like
Other DBs
NCBI-GeneID: 119026734
NCBI-ProteinID: XP_036967159
EnsemblRapid: ENSALTG00010013267
LinkDB
Position
10:complement(381399..391769)
AA seq 239 aa
MMKMMKMMVVLVLSCVLSVSADVLHQDIAVTGCSASDGEDMYGLDGEVMWYADFKNKKGV
EPVPDFVGITYEEGTYQQAEANQQICRTNLENHRKAFKDFPLESDPPSSPVIYPRDEVEL
EVKNTLICHVTGFFPAPVKFSWTKNGQKVTEGTSVNVPFVNKDFTFNQFSKLDFTPQQGD
IYSCSVTHPALTEPQTRMWDVEKTLPGVGPAVFCGLGLTVGLLGVAAGTFFLIKGNECR
NT seq 720 nt   +upstreamnt  +downstreamnt
atgatgaagatgatgaagatgatggtggtcctcgtcctctcctgtgtcctcagtgtctca
gctgatgttcttcatcaggacattgctgtcactggctgttcagcctctgatggagaggac
atgtacggtctggatggtgaagtgatgtggtacgcagacttcaagaacaagaaaggagtc
gagcctgttcctgactttgtagggattacctacgaggaaggaacttatcaacaagctgag
gctaatcaacagatctgcagaaccaacctggaaaaccatcgtaaagccttcaaggacttc
cccctggagtcagatcctccctccagtccggtcatctaccccagagacgaggtggagctg
gaagtgaagaacaccctgatctgtcatgtgactgggttctttcctgctcctgtgaagttc
tcctggaccaagaacggacagaaggtgacggaaggaaccagcgtcaacgttccctttgtc
aataaagatttcaccttcaaccagttctccaaactggacttcaccccccaacaaggagac
atctacagctgctcagtgacccatccagccctgacggagccacagaccaggatgtgggat
gtggagaagactctgcccggtgttggacctgcagtgttctgtggactgggtctgactgtg
ggtctgctcggtgtggctgctggaaccttcttcctcatcaaaggaaacgagtgcagatga

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