Acanthopagrus latus (yellowfin seabream): 119026989
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Entry
119026989 CDS
T08233
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119026989 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119026989 (trpc5a)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119026989 (trpc5a)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119026989 (trpc5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
119026989
NCBI-ProteinID:
XP_036967659
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All DBs
Position
10:3108167..3209335
Genome browser
AA seq
1092 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GNFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEHNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFIGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSIWYLLMWLHNKLCRRGQPPGEDTHKCENLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETARDDGGLASEDDSESGDGCGGGGQKSKGVTFMTPLEDDKQPTPQLGVSALVRSISGM
TQIERGSEGNDGELEEGVGWGEEEEDEEGKPKSNGLKTTVIPPSSTTLPSPSSSFSSSFS
SSLARTRSRLQRLSTPGSKADSFKRLSYLFSRSKRKAPPMPLPLQSPPSYTISDGLLRPL
GSHSHSDFGLSDVTRSETHLNEVGRSVDINNPSFSPRRTNGRDSLLTLPLPPPCPCQSLH
CASNMSESSSRLLDSSEDVFQGGGVGGAGEGGVGGGGGRGGGVMVMGGWVGPCGDVREDS
CEVIEDSVTTQL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatgacacaactgtactacaagaaggcgacatactcgccgtaccgcgaccgc
atcccgcttcagatcgtgcgggctgaggtggagctgtctgctgaggagagggcctacctc
accgcggtggagaaaggcgactacgcgggcgtcaaacacgccctgcgcgaggccgaggtc
tactacaacatggacgtgaactgcctggacccgctgggccgcagcgcgctgctcatcgcc
atcgagaacgagaacctggagatcatggagctgctgctggaccacggcatccacacgggc
gacgccctgctctacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcg
cacaggaggcccagcggcgagaagcaggttccttctctgatgatggacagtcagttttca
gagttcaccccagacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctcctcgtccagcggaaggtcaccatccccagacctcaccagatccgatgtgac
tgtgtcgagtgtgtttccagttcagaggtcgacagtcttcggcactcgcggtctcgactc
aacatctacaaagctctggcctcaccgtccctcatcgctctgtccagtgaagatcccatc
ctcactgccttcagactaggctgggaactcaaagagctcagcaaggtggagaatgagttt
cgccaggagtacgaggagctgtcgcagcagtgcaaacgcttcgccaaagatcttctggac
caggcccggagctccagagagctggagaccatcctgaaccacagagacaacgaccagagc
gaggagctggaccccagacagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagttcgtggctcagccgaactgccagcagcttctggccacgctgtggtac
gacggcttcccgggctggaggaggcgacactgggccgtcaaactggtgacctgcttcatc
atcggactcctgtttcctgtcttctcactgatctacctgttggcgccgaagagcgctctg
ggaaacttcatcaagaagcccttcatcaagttcatctgtcacacggcgtcctacctgacc
ttcctcttcctgctgctgctggcatcgcagcacatcgcccgcaccaacctgcacatgcag
ggacctccgcccaccatcgtggagtggatgatcctgccgtgggtgctgggcttcatctgg
gcggagatcaaggagatgtgggatggaggattcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactcactgtacctggccaccatatcgctgaagatagtggcg
tacgtgaagtataactcatctcgtccgagggaggagtgggagatgtggcaccccacgctg
atagccgaggcgctgttcgccatcgccaacatcttcagctccctcagactcatctccctc
ttcaccgccaactcccacctggggcccctgcagatctcgctggggaggatgctgctggac
atcctcaagttcctcttcatttactgtctggtgctgctggcattcgctaacgggctgaac
cagctgtatttctactacgagacgaaggcctcggaggaacacaacaactgcaaaggcatc
cgctgcgagaggcagaacaacgccttctccacgttgtttgagacccttcagtctctgttc
tggtccatattcggcctgttgaatctgtacgtcaccaacgtgaaggctcgccacgagttc
acggagttcatcggggcgaccatgttcgggacgtacaacgtcatctcgctggtggttctg
ctcaacatgctcatcgccatgatgaacaactcgtaccagctcatcgctgaccacgccgac
atcgagtggaagttcgcccgcaccaagctgtggatgagttactttgacgagggcggcacg
ctgccgcctccgttcaacatcatcccgagccccaagtccatctggtacctgctcatgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggggaggacacgcacaaatgtgaa
aacctgcgagagttcacggaacgccacgccgacagtctgatacagaaccagcactaccag
gaagtgatccggagcctggtgaagaggtacgtggcggccatgatacgcagcgccaagacg
gacgaggggctgacggaggagaactttaaggagttgaagcaggacatctccagcttccgc
tacgaggtcctggatctcctcgggaaccgccgtcctccccggcgacattactcctcctcc
agtgagacggcgagagacgacggtggcctggcctcggaggatgacagcgaatcgggcgac
ggctgcggaggtggaggccagaagtcgaagggcgtgacgttcatgactccactagaggac
gacaagcagccgacaccgcagctcggcgtgtctgcgttggtgcgctccatttctggaatg
acccagatagaaagagggagcgagggtaacgatggagagctggaggagggtgtcggatgg
ggggaagaggaggaggatgaggaggggaaaccaaagagcaacgggctgaagacaaccgtc
atccctccgtcctccaccaccttgccctccccgtcttcatcgttctcctcctccttctcc
tcatcgctcgctcgcacgaggagtcgcctgcagcgcctctcaactccaggatcaaaggca
gactcattcaagcgcctctcctacctgttctcgcgctccaaacgcaaagccccgcccatg
cctctgcccttacagtccccgccctcctacaccatctccgacgggttgctccgccccctg
gggagccacagccactccgacttcggactcagtgacgtgaccagaagcgagactcacctg
aacgaggtgggccgctcagtcgacatcaataacccctcgttctccccgcggaggacgaac
gggcgggactcgctcctgacgctgcccctcccgcccccgtgcccctgccaatccctgcac
tgtgcttccaacatgtccgagtccagctcgcggctcctggactccagcgaggacgttttc
cagggcggaggcgtaggaggagcgggcgagggaggcgtgggcggaggagggggaagaggc
gggggggtgatggtgatgggcgggtgggtgggaccgtgcggtgatgtcagagaggacagc
tgtgaggtcatagaggactccgtcaccacacagctatag
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