KEGG   Acanthopagrus latus (yellowfin seabream): 119029524
Entry
119029524         CDS       T08233                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:alat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    119029524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:alat03000]
    119029524
   04121 Ubiquitin system [BR:alat04121]
    119029524
   03036 Chromosome and associated proteins [BR:alat03036]
    119029524
Enzymes [BR:alat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     119029524
Transcription factors [BR:alat03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    119029524
Ubiquitin system [BR:alat04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     119029524
Chromosome and associated proteins [BR:alat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119029524
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     119029524
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8
Other DBs
NCBI-GeneID: 119029524
NCBI-ProteinID: XP_036972264
LinkDB
Position
12:complement(13846120..13872068)
AA seq 1397 aa
MAQAVETCAESGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLVSDSYNAKFVSSL
EGKDFSYEYVQREALRVPLIFKEKDGLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GTEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KQSQTEATNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGRKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVHSKFRFPFYYEICWYVLERYLHCLTKRSYLSQEVHKE
PVIMDNEAKTNTESPSSDSRSQDINEDSCETQVRDDQGEKPERVTQDGPCSPDNRRGQHL
KAVLSVDSEDSCNPGSTSLDFPQTPSDSPASESQSKWTHLTEFELSGLRTLVEKLESLPE
NKKCIPEGIENPQALLDDMKAVLKEHADDDPKLALSGVPVVYWPKKTVKPRPPNRPKPKM
AASPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLICGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKASKQKRGPGFKYASNLPGSLLKEPRLNRESKEEPEPP
MVATATVTALTPTSAVKRKAERDECPKRKEEEPPKKRPPLLILDGTPRPRLEDNPLRKKR
KLFDTNDEPAIVKKKKKLLKPEDPLAPKLLRQIKTENDQGDEEDDQEEHDDGFPSDRIHV
KEKNEYDEEDQEEDEEVEEEEEEVVKKERESSAEDKPKLLLSPLLRTSAARETEQTSSNS
PRAGPSSESGEAQEKCAVQPKPRHQRRRLPNKELSKEFNQDIPKTEDGLSNQNHSSVKTE
DIPANHNRRPLKTEDSVTNQNRKPLKTEDSTTNQSRRALKTEEGLANQNRRPLKTEDSLA
NQNHRPVKTEPENEVDDQKPRWPLNNGGSDLGDWLRHRGREVNETQRGYSPLSWNRSAQI
TPICPRPLPCRSPPKCIQMERHVIRPPPISPPPDRLPLNSDEAHVMRREMWMMVFGHLAH
RDLCVCMRVCRTWNRWCCDKRLWKHINLNRCKSITPLMLSGIIRRQPAALDLSWTNISKK
QLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPT
DNRPGQLDNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPMLSKLDLSYCNHVTDQSVNIL
TAAGTTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMS
VSVQFELIEEKLLQKIS
NT seq 4194 nt   +upstreamnt  +downstreamnt
atggctcaggccgtggagacgtgtgctgaatccggacgcaggctgcgctccatctgccgg
aggatgtacgacgagaacgaggatttgtctgatgtggaagaaatcgcaaacattaggggg
ttcagcgtggaggagaagctcgtcagtgacagctacaacgcaaagttcgtcagctcgctg
gagggtaaagacttctcttatgaatatgtgcaaagggaggctcttagggtgcccctcatt
tttaaagagaaagatggactggggatcagaatgcctgatccagaatttacagttagtgaa
attaaaggcttggttggcagtcgtcggtctgtggacgttatggatgtaagcactcagaaa
gggactgaaatgagcatggctcagtttgtccgttattacgagacaccagaggaagagcgg
gacaaactcttcaatgtcatcagcttggagttcagccacaccaagctggagaatctcatc
aagcggcccacagtggtggaccaagtcgactgggtggacaacatgtggcctcctgatctg
aaacaaagccaaacagaagccaccaatgtcatctcagagatgaagtaccctaaagtgcaa
aggtattgtctcatgagtgtgaagggctgctacacagacttccacatcgattttggggga
acttccgtttggtatcacgtattcaagggacggaaagtgttttggctcgtgcctccaacc
cctcacaaccttgccctttatgaggactgggtcctttcgggcaagcagagtgatatcttc
ctgggagaccgagctgatggatgccagagagtggagcttaagcaaggatacaccttcttc
atcccatctggttggatccatgctgtctacactcctgaggacacactggtgtttggaggc
aacattctgcacagcttcaacattcctatgcagctcaccatccatgagatagagaatagg
actaaggttcattccaagttccgtttccccttctactatgagatatgctggtatgtcctg
gagaggtacctgcactgcctgaccaaaaggtcctacctgtctcaggaggtccataaagag
cctgttataatggacaatgaggcaaaaacaaacacagagagcccctcctctgactcaagg
agccaggacataaacgaggactcatgtgagactcaggtcagagatgaccagggtgaaaaa
cccgagagagtcacccaggatggcccctgttcacctgacaaccggaggggccaacacctc
aaagctgttttatctgtcgactctgaggacagctgtaaccccggctccacctctctggat
ttcccccagacaccctccgactctccggcctcagagtctcagagtaaatggacgcatttg
accgaatttgaactgagcggactcaggacgctggtggagaagctggagtcgcttcctgaa
aataagaaatgcattccagagggaatcgagaacccacaggccctgctggatgacatgaag
gctgtattgaaagaacacgctgacgatgacccaaaattagcgctcagtggagttcctgtt
gtgtactggcctaagaaaactgtaaagcctcggcctcccaaccggccgaaacctaagatg
gcagcttctcctgcatcagcagtcaagctgtcagccagtcggggaacatctggtgccagg
aggagaaggactcgctgtcggaagtgtgaggcatgcctgcggacggagtgcggagagtgc
catttctgtaaagacatgaagaagtttggcgggccgggccgtatgaagcagtcctgcatc
atgaggcagtgcatcgctcccgtcctgccccacacggcagtgtgtctcatctgtggagag
gcagggaaagaggacacagtggaggacgaagaggagaagtttaacctcatgctcatggag
tgctccatctgcaatgagattgtccatccaaactgtcttaaggtgaaagattcaaatgga
gtagtcaacgatgagttgccaaactgctgggagtgcccgaagtgcaaccatgccgggaaa
acggggaaagcctcaaagcaaaaaagggggccagggtttaaatatgcttcaaacctcccc
ggctctctgctgaaagagccgcggttaaaccgggagtcaaaagaggagcccgaacctccg
atggtggctacagcaactgttactgctttgactcccacgtctgctgtgaagaggaaggca
gagcgggacgaatgtcccaagaggaaagaggaagagcctccaaagaaacgccccccgctg
ttgattctggatggtacgcctaggccgaggctagaggacaaccctctaagaaaaaagagg
aagctttttgacacaaatgatgaacctgccattgtaaaaaagaagaagaagcttttaaaa
ccagaggatcccttggctccaaagctgttgcggcaaatcaagacagagaacgatcaggga
gatgaagaagacgaccaggaagaacatgatgatggattcccctcagacaggattcatgta
aaggagaagaatgagtatgatgaagaggaccaggaagaagacgaggaggtagaggaggag
gaagaggaggtggtgaaaaaagagagggagagcagtgcagaggacaagcccaagctcctg
ttaagtccattgctaagaacatctgcagctagagaaactgaacaaacctcctctaactct
ccccgagccggaccgagcagcgagtcaggagaagctcaggagaagtgcgctgtccagcca
aagcctcgccatcagcgccgacgcctccccaacaaagagctgagcaaagagttcaaccag
gacattccaaagacagaagacggtctgtccaaccagaaccacagctcagtgaagacagag
gacatcccagccaatcacaaccgacgaccactgaagactgaggactctgtgaccaatcag
aaccgtaaaccactaaaaacagaggactcgaccactaaccagagccgcagggcacttaaa
acggaggagggtttggccaaccaaaacaggcgaccgctgaaaacggaggacagcctggcc
aaccaaaaccacaggcctgtaaaaactgaacccgagaacgaagtggacgaccaaaagccg
aggtggcctctcaataacggcggcagcgaccttggtgattggctgcgacacagaggacgg
gaggtgaacgagacgcagcgtggctactccccactcagctggaacagaagcgcgcagatc
acacccatatgccctcgtccactcccctgccggtcgccgccaaaatgcatccaaatggag
cgccacgtgatccggccccctcccatcagccccccgcccgacagattgccgctgaacagt
gatgaagcgcacgtgatgcgaagagagatgtggatgatggtgttcggtcacctcgctcac
agagatctttgtgtctgcatgcgcgtgtgcaggacgtggaacagatggtgctgcgacaaa
aggctttggaagcacatcaatctgaaccgctgcaagtccatcacaccactcatgctgagc
ggtatcatccggagacagccggcagctctggacctcagctggaccaacatctccaagaaa
cagctcagctggctcatcaacaggctgccaggtctgcgtgtgctgctgctgtcaggatgc
tcctgggtggccgtctctgctctttgcacctccagctgtcctcttctccgaactttggat
gttcagtgggttgagggactgaaagacgcccagatgagggacctgctgtcgccccctaca
gataacaggccaggtcagttagacaacaggagtaagctgcgtaatgtggaggacctgcgc
ctggcaggcttggacatcaccgacacgtctctacgcctcatcatccgttacatgcccatg
ctatccaaactggacctcagctactgcaaccacgtcaccgaccagtccgtcaacatcctg
actgctgccgggacgaccaccagagactcgctcactgacatcaacctgtcagtctgtaat
agggtcacggaccagtcgctgacctatttcaagcgctgtggcagcatatgtcacatcgac
ctgcgatactgcaaacaggtgaccaaggaaggatgcgaccagttcattgcagagatgtcc
gtcagcgtgcagtttgaactcatagaggagaaactgctgcagaagatcagttag

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