KEGG   Acanthopagrus latus (yellowfin seabream): 119030239
Entry
119030239         CDS       T08233                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010  MAPK signaling pathway
alat04137  Mitophagy - animal
alat04141  Protein processing in endoplasmic reticulum
alat04210  Apoptosis
alat04217  Necroptosis
alat04621  NOD-like receptor signaling pathway
alat04622  RIG-I-like receptor signaling pathway
alat04920  Adipocytokine signaling pathway
alat05132  Salmonella infection
alat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:alat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119030239
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119030239
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    119030239
  09143 Cell growth and death
   04210 Apoptosis
    119030239
   04217 Necroptosis
    119030239
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    119030239
   04622 RIG-I-like receptor signaling pathway
    119030239
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    119030239
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119030239
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119030239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alat03019]
    119030239
   04121 Ubiquitin system [BR:alat04121]
    119030239
Enzymes [BR:alat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119030239
Messenger RNA biogenesis [BR:alat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     119030239
Ubiquitin system [BR:alat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    119030239
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 ATG16 zf-C3HC4_4 zf-RING_6 DEC-1_N
Other DBs
NCBI-GeneID: 119030239
NCBI-ProteinID: XP_036973561
LinkDB
Position
12:20461050..20469550
AA seq 597 aa
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCGACIKEDIFEDPTSILKQGCAFPDNAVRREVEHLSAVCINENCTWKGSIKE
YEMNHEGKCEFMIIPCPSCKEHIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAAASSSSSSSGPPGPPASAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKTK
VAELGRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQL
ERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAFYTS
KYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHII
DAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggccacacaggagccgtcccctccctcgtccatggagagcaacaaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacatc
ctccgacgaccctttcaagcccagtgtggacatcgcttctgttcctactgcttcaacagg
accgtgagtaatggaccccagaaatgtggcgcctgcattaaagaggatatctttgaggat
cctacatcgattttgaaacaaggatgtgcttttcctgacaacgcagtccgaagggaagtc
gaacacctttcagccgtgtgtatcaatgaaaactgcacctggaaaggcagcattaaagag
tacgagatgaaccacgagggcaagtgcgagttcatgatcatcccctgcccctcctgcaaa
gaacatattcgcttcaacgagcaggagcgccataacgagcgcgagtgcccggagagaaca
ctcaactgcaagtactgcaaggagccatttcacttcaaaaacatcaaggcgcacgatgag
atctgtcccaagtacccgatgatctgtgaaggctgcgccaagaagaaaataccccgagaa
aagtacgtggaccacatcaagttctgcagcaaatttagaactccatgtcgatttcatgtc
gtgggatgtgacatgtccgtggaaaaggaaaagattcacgaccatgagcgcgcctacgcc
tacgagcacctcaacctgttgctgcactacatcatgggcatgaaagtgagcatggagggc
ctgcagccccagggactggaactcgccggacacaaactggtggaactccagcagtccctc
agggagctcgaggccagagtctcccagcttagcaccacctcctctgggcctcccgtgcag
ggagctgccgccgcctcctcctcatcctccagctccggtcctcctggtccacccgcttca
gctccgctccctcctccacccaccctggctcccactctgtccgtgtctacctccttcacc
cccctgcccagctcggtgggagcggcactggagctccagctccacagcgagaagaccaag
gtggccgagctgggccgcaggtgtacggagctcgaagttaaagccggcacgtttgaaaat
gtggtgtgtgtcctgaacagagaggtggagaggttcgccaccaccatggaggccagcaac
cgtcagcacaaactggaccaggacaagatcgaggctctgagtaacaaggtgcgtcagctg
gagaggacggtggggttgaaggatctgacagtcgctgagatggagggtcggctgagggaa
atgtctgccactacgttcgatggcgtcttcgtctggaggatctctgattttgccaaaaag
aggcaagacgccatcgccggtcgagcccccgccatgttttcaccagccttctacaccagt
aagtacggctacaagatgtgtctgcggatctacctgaacggagatgggacggggcgtggc
agccacttgtccttgttctttgtggtgatgagaggactgagtgacgctctgctcaaatgg
cctttcaaccagaaggtgactctgatgctgctggaccagagcaacagggagcacatcatc
gacgccttccgccccgatgtcacttcctcctccttccagagacccgtgagcgagatgaac
atcgccagcggctgtccgctcttctgcccgctctccaagctcgacgccaagaactcttac
attcgcgacgacaccatcttcatcaaggcgatcgtggacctcaccggcctctag

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