Acanthopagrus latus (yellowfin seabream): 119031768
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Entry
119031768 CDS
T08233
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119031768 (ttc3)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119031768 (ttc3)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119031768 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
TPR_1
TPR_2
zf-C3HC4
zf-C3HC4_2
TPR_16
zf-RING_UBOX
zf-C3HC4_3
TPR_14
zf-RING_5
TPR_17
TPR_11
zf-ANAPC11
zf-RING_11
zf_RING_Vps8_fungal
TPR_9
TPR_19
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
119031768
NCBI-ProteinID:
XP_036976346
LinkDB
All DBs
Position
13:complement(19734765..19764572)
Genome browser
AA seq
1765 aa
AA seq
DB search
MSDSDSDSDFCEDIREHMAAVMDSHLMITFNPSDEILEQWSHLPAETRRESTERMKVCAF
WLPILLQRDESSRILHWALQIGLIDSNEDLSLRHIRNIETVEAVLRALESGTLRKDQTKH
VFRISNLLNLQRSPGDVDEALRWLERTGEPGIFHRLKDLGPIETCFIALHLIFTEFAKYI
QDMGRNKEKTMRSLMAPPPDYQMEKSEEMKRKGNENFRREQYEAAVQFYSRAIKHYPDNH
IIYGNRALCYIRSEKYLKAVGDGKRATLIKPLWAKGHYRYCEALFSMGEIQMAIEANNSA
RILCKDDQEGLKDLEQQHQKFITEKPEPKVGKVKKTHSKRSDSTNRAHVMEARAQTVKAV
KTDPATNAFPQSNVPHNKMDKKPGKNEKTAQAQGNTKDSKISKSEISSKDGKAESNTEAK
KKPKGKNPSGDQILKVDDSKAGVVKELRSMVQDAHTALADLRSRNAEQAFSQALALLETS
TPKELGLSILDLLLLLYGRASALTDIGQPEELGEAQRLLEKIKSFEERTFQCLVFYAIGR
VHVKENRFAVALQQFSDSLQMVKNQITPGKLTWPLTKEIVKETQPDYFKEILDSNIELCK
FPPIADAICRLEKCNGHLKAEIYFTDPDFKGFIQICCCQSCIIEYHMTCWKTLKASSFSE
KNEKDFLQEPCMTPDCVGRICSIKIFGPTGLVKCKFETTIPKQYTAKKLKVNQKCTSLKK
LKSKEERRLKRKQHKQSFQEKQAINDEILQKKEDSATQIQQKAWLIYRDRVLLQISQNLE
LLREVKGLQVSAVTSSLKPWLELDSSKGNQIAGRILNWQQEQLETLDQVIELLLERKNRV
WARVLVQLLSSCLDLNPKLNNWACQLNNAGLNAAKSFIERYSGHLEQLDLAFLLNFAPLQ
EVIIEKLGTRPEQFSSIGLTVTEYLKQAPPHDMRLFIWTLEEHRDEYVSCHSILDEYFDM
MDGHCSVLKKSDENQNNSPMKTRGRKKRQKEPKGVFVLPGTRSVTSREEWDQDFFEDESL
SFLDPGDPFSVPSHLREQVASFEDQYNSTRHTSHYKKILDNHPDPTKESLYDYFAQILEE
HGPLVAEDPLLVGELENFPPVAQLKIQEAGGFEHFLLESLRFIKMGRSIGLAKHAVSLQQ
VGNGASLDDLDDLDVILDPDSDSQLDLHDPAFTNYVDSYSSAETDVCPVLPSPYVYGFIP
TLPLSAHAMSSSVNNPNTHWASGDSQYEASNFLTNGYEELDLYYSEADVGVSETDQSSDR
GAPMMTEESLLKRHAASQTCQETMRSVAVNTEPHERFETSSGDINKKLKSNKDLEEQIKK
MANSFDIVSLRHKEDVAYLEEEVQNITVTIQVTNQELALFQQKLEEEVKKDQKEKKANQE
TLRSLKVETEEILEEHGRLARTIREKKADYDVKLSDFLELSNQSAAEKMSLEDEIKRCMV
AFNSATGRSNTAQLSVVGSNRDQGLYDLCRELASAKALLTKLDEAAHRFQNQDLEITRNG
LRASIQEIEEKISSAETQFQEQMDHVKNGRRVSELLSVNISNHAERPAATLSGAAKEFVP
SSAASHSSPPLPQQPAAETPAQMLHKPPARIVGPPHTHSTVFDKAMERLATMFPDYTRPD
LMRFVQELRSTSGGSLSNMALQDMVGGVTQLILDHQERLNAAKMNAMGRGSPAKSATPPL
VPPVWQSLGPQRAAHSNALNVEDPCIICHDDMTPDDICVLECRHSFHKECIKSWLKEQST
CPTCRDHALLPDDFPVLSGRRRQAP
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcagactctgactctgacttttgtgaggacatcagagaacacatggctgct
gtgatggacagtcatttaatgataaccttcaatccatcagatgagattcttgaacagtgg
agccatcttccagctgaaacaagaagggaatctacagagaggatgaaagtttgtgccttc
tggcttcccattttgctacagcgtgatgagtccagcaggattcttcactgggctttacag
ataggtctaattgactcaaatgaggatttgagtctgaggcacattcgcaacatagaaaca
gtggaagcagtcctcagagccttggaaagtgggacattgagaaaagaccaaacaaagcat
gttttccggataagcaacctgttaaacctgcagcgctccccaggggatgtggatgaagca
ttacgctggttggagcggacaggagaacctggtattttccaccgcctcaaggaccttggc
cctatagagacctgcttcatagccctgcatctaatcttcacagagtttgccaagtatatt
caggacatgggcagaaacaaggagaaaacgatgaggtcgctgatggctcctccaccagac
taccaaatggagaaaagtgaagaaatgaagaggaaaggaaatgagaactttcggagagag
cagtatgaagctgctgtgcagttttattccagagccatcaaacattatcctgacaaccat
atcatttatggaaacagagccctctgctatatccgaagtgagaaatacctaaaagctgtt
ggtgatggaaaacgtgctactctgataaaaccgctctgggcaaagggtcactaccggtac
tgtgaggctttgttctccatgggagagatccaaatggccattgaagccaacaattcagcc
cggattctgtgtaaggatgaccaagaggggctcaaagacctggaacaacaacaccagaaa
ttcatcactgaaaagccagaacctaaagttggaaaggtgaagaaaactcatagtaaaaga
tcagacagcactaacagagcacatgtaatggaggcacgagcacagactgttaaagctgtt
aagactgatccagctaccaatgcttttccacagagtaacgtcccacataataaaatggat
aagaagccagggaaaaatgaaaagactgcacaggcacagggcaacactaaagactccaaa
atatcaaaaagtgaaatttcttcaaaggatgggaaagcggagtccaacactgaagcaaag
aagaaaccaaagggcaaaaatccatctggagatcagatcctgaaggtggatgacagtaaa
gcaggtgtggttaaagagctgagatctatggtgcaggatgcccacaccgctctagctgac
ctccgcagccgcaatgcagagcaggcctttagccaggcactcgccttactggaaaccagc
acgcccaaggaacttggactttctatactagatttgctgttgttgctgtatggtcgagcg
tcagccctgacagacattggccagcctgaggaacttggagaagcgcaaagacttctagag
aagatcaaatcatttgaggagaggacatttcagtgtctggttttctatgccatcggcagg
gtgcatgtcaaagagaacaggtttgcagttgctctgcagcagttttcagactccctgcag
atggtcaagaatcaaataactcctggtaaactcacctggcctttaacaaaagagattgtc
aaagaaacgcagccagactatttcaaggagattctggacagcaatattgagttgtgcaaa
tttcctcctattgctgatgccatttgtcgactcgagaagtgcaatggtcatttgaaagct
gaaatctacttcacagacccggatttcaagggtttcattcagatttgctgctgtcagagc
tgcatcattgaatatcacatgacctgttggaagaccctcaaagcatcgtccttctctgaa
aagaatgaaaaggacttcctgcaagagccctgtatgactccagactgtgtcggacgaatc
tgtagtatcaaaatctttggtccaaccggcctggtgaagtgtaagtttgaaaccaccatc
ccaaaacagtatacagcaaagaagctgaaagtgaatcagaaatgtacaagtctgaagaaa
ttaaaatcaaaggaagagcgccggctaaagaggaagcagcataagcagtcatttcaagaa
aagcaggcgatcaatgatgagattctgcagaagaaagaggactcagcgacacagattcaa
cagaaagcttggctgatttacagagatcgagtacttctgcagatcagccagaacttggag
ctcctgagagaggtgaaaggcctgcaggtgtcggccgtgacaagtagtctgaagccctgg
ctggagctggactcgtcgaagggaaaccagatcgctgggaggatactgaactggcagcag
gagcagctggagactcttgatcaggttattgagctgctgttggagaggaagaaccgggtt
tgggctcgtgtcctcgtgcaactactcagcagctgtctggatttaaatcctaaactcaac
aactgggcgtgccagctcaacaatgcaggtctgaatgctgccaaatccttcattgagcgc
tactcaggacacttggagcagctggatttggcttttttgctgaactttgctcccctgcag
gaggtgattatagaaaagctcggtactagaccagagcagttttcgagcattggcctgact
gtgactgaatacctaaaacaggccccaccacatgacatgagactctttatctggactctg
gaggagcatagagatgagtatgtctcctgccacagtatactggatgaatattttgatatg
atggatggccattgttcagtcctaaaaaagtctgatgaaaatcaaaataattctcctatg
aagaccagaggcagaaaaaagaggcagaaagagccaaagggtgtttttgttttgcctggg
acgagaagcgtaacttcaagagaagagtgggaccaagacttttttgaagatgagtcatta
tcattccttgaccccggtgatccattcagtgtacctagtcatcttcgagagcaagtggcc
agttttgaggaccagtacaacagcaccagacacacaagtcactataaaaagattttggat
aaccaccctgacccaaccaaagagagtttgtatgactactttgctcagatcttggaggag
catggtcccctggttgctgaggaccctctgctggtgggagaactcgaaaatttccctcct
gtagctcaactgaaaatccaggaagcgggtgggtttgagcacttcctgctggagtctctt
cgcttcataaagatggggaggtctatcggtctggcgaagcacgctgtctccctgcagcag
gtcgggaatggagccagcctggatgacctagacgacctggatgtaatcctggatcctgac
tcagactctcaacttgatttgcatgaccctgctttcacaaactatgtggacagttattca
tctgcagagacagatgtctgtcccgtcctcccaagtccttatgtttatggctttatccct
actcttccactgtcagctcatgcaatgtcttccagtgtgaacaatcccaacacacactgg
gctagtggtgacagtcaatatgaagcctctaactttttaactaatggctacgaagagctg
gatctctattacagtgaagctgatgttggagtttcagagactgatcaatcatcagacaga
ggtgctcccatgatgactgaagaaagccttttgaagagacatgcagcatcacagacttgt
caggagactatgaggagtgtagcagtgaacactgagccgcatgaacgtttcgagaccagc
tcgggtgacattaacaaaaaactaaagagcaacaaggacttggaggagcagatcaagaaa
atggcgaacagctttgacatagtcagcctccggcacaaagaagatgttgcttacctggag
gaagaagtacagaacatcactgtcactatacaagtgaccaaccaagagctggcactgttc
cagcagaagctggaagaggaggtgaagaaggaccagaaggagaagaaggccaaccaggaa
acactgaggtcgctcaaagtagagacagaagagattctggaggaacacggcagacttgcc
agaaccattcgcgaaaagaaagctgactacgacgtaaagttgagtgatttcctcgagctg
agcaatcagtcagcagctgagaagatgagtctggaggatgagatcaagcgctgtatggtt
gcgtttaactcggccaccgggaggtctaacacggcacagttgtcagtggtggggagcaac
cgcgatcagggattatacgacctctgcagagagctggcaagcgccaaagctctgctgact
aaactggacgaagcagcacacagattccaaaaccaagacctggaaatcaccagaaacggc
ttgagagccagcattcaagagatcgaggaaaaaatctccagtgcagagacacagttccaa
gagcagatggatcatgtgaagaatggtagaagagtcagcgaactcctctcagtcaacatc
agcaaccatgctgaacgtccagctgcaacactgtctggagcagccaaagagtttgtccct
tcgtctgcagcctcccacagctctcctccgctcccccagcagcctgcagctgagacaccg
gctcagatgctgcacaaacccccagccaggattgtggggcctccacacacacacagcact
gtgtttgataaagccatggagcgcctggccaccatgttcccagactacacaaggccagac
ttgatgaggtttgttcaggagctgcgttcaaccagcggtggaagcctgagcaacatggca
ctgcaggacatggtcggtggagtgacccagctgatcctggaccatcaggagaggcttaat
gctgccaagatgaatgccatgggacgtgggagtccagctaagagtgccaccccccctcta
gtgcccccagtctggcagtcacttggaccacagagagccgcacactcaaacgcactgaat
gttgaggatccttgcatcatttgtcacgatgacatgactccagatgacatttgtgtgctg
gagtgcagacacagcttccataaagagtgtatcaagtcgtggctgaaggagcagagcacc
tgtcccacctgcagagatcacgctctgctgcctgacgacttccccgtgctttctgggagg
aggcgccaagccccatga
DBGET
integrated database retrieval system
