Alcaligenes sp. NLF5-7: MID00_03450
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Entry
MID00_03450 CDS
T10407
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn00540
Lipopolysaccharide biosynthesis
alcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
MID00_03450 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
alcn01005
]
MID00_03450 (lpxC)
Enzymes [BR:
alcn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
MID00_03450 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
alcn01005
]
Lipid A
MID00_03450 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
UTM02481
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All DBs
Position
complement(726939..727862)
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AA seq
307 aa
AA seq
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MLRQRTIKNVISTKGVGLHSGRRVELTLRPAAPDTGIVFHRIDLPEIVDLPAQADKVGGT
RMASVLIKDNVRVSTVEHLMSAIAGLGIDNLHVDLTAEEVPIMDGSAGTFVYLLRSAGLQ
EQEAAKKFLRVLKPIEVSEGEGKDIKWARLEPYEGFALQFSIDFHHPAIDATANFAEVDF
AHDSYVKTISRARTFGFASEVEALRAAGLARGGSLDNAIVMDEYRVLNSDGLRYEDEFVK
HKILDAIGDLYLIGHPLIARYVACKSGHGLNNQLARALLAAQDSWELVTFESAASAPHAF
SSEWKFA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtcagcgcaccatcaagaatgtcatcagtaccaaaggagtcggcttgcactct
ggccgtcgtgtcgaactgacactgcgccctgctgcgcctgacacgggtattgtgtttcac
cgtatcgatctgcccgaaatcgtggatttgcccgcacaggcagacaaggtcggtggtacg
cgtatggcttcggtgctaatcaaggataatgttcgggtttcaaccgtcgagcatttgatg
tcggccatcgctggcctgggcattgataatctgcacgtggacctgacggctgaagaagtg
cccatcatggatggcagcgccggcacatttgtgtatttgttgcgttcggcgggcttgcag
gagcaagaagccgccaagaagtttttgcgtgtcctcaaacccatcgaagtctctgaaggc
gaggggaaggacatcaagtgggcccgtctggagccctacgaaggctttgcccttcagttt
tctatcgattttcaccacccggccattgatgcaacggccaattttgccgaggtggatttt
gcgcatgactcgtacgtgaagactatttcacgtgcgcgcaccttcgggttcgccagcgaa
gtggaagctttgcgtgcggccggtctggcccgtggcggcagtttggataatgccatcgtc
atggacgagtaccgtgtcctgaacagcgacggtctgcgttacgaggacgagttcgtcaag
cacaagattctggatgctattggtgacttgtacctgattggccaccccctgattgcacgc
tatgtggcgtgcaaatccggccatggtttgaataaccagctggcgcgtgccttgctggcc
gcccaggatagctgggaactggtgactttcgagtcggctgccagtgcaccccacgctttt
tccagcgagtggaaattcgcttga
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