Agrobacterium larrymoorei: CFBP5473_05510
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Entry
CFBP5473_05510 CDS
T06268
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf00300
Lysine biosynthesis
alf00550
Peptidoglycan biosynthesis
alf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFBP5473_05510
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFBP5473_05510
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
alf01011
]
CFBP5473_05510
Enzymes [BR:
alf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CFBP5473_05510
Peptidoglycan biosynthesis and degradation proteins [BR:
alf01011
]
Precursor biosynthesis
Amino acid ligase
CFBP5473_05510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QCI97424
UniProt:
A0A4D7DP92
LinkDB
All DBs
Position
circular:1172593..1174053
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AA seq
486 aa
AA seq
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MNLRDLSGTEFPELNELLRTEAGALTITGITADSRKVQQAMLFVAVAGNKADGATFVQDA
ISKGAAAIVSSQPLNVSVPVLVVSDARLYLALSAARFYGRQPETMVAVTGTAGKTSVASF
TRQIWAFAGHPAAQIGTTGVIAPGREEYGSLTTPDPVSLHALLAELADEGVTHAAMEASS
HGLDQRRLDGVKLSAAGFTNLGRDHMDYHPTVEDYMAAKMRLFETLLPKGSPVIIFADDP
WSAQAIDVATKAGHDVRTVGRKGDYLSLKRVEHFRHKQMIEVHHEGAIYEVDIPLAGDFQ
VANALVSAGLAMSTGVSASVAMKALEKLIGAAGRLELVGHSGNGALAYVDYAHKPDSLEK
VLTSVRPFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEEPATIRSE
IMAAAPGALEIADRAEAIRHAVSMLGNGDTLIVAGKGHEEGQIIGGVTLPFSDHEQVRSA
LEGLKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcgagacctctccgggaccgagttcccggaactgaatgaactgcttcggact
gaagccggggcgctgacgattacggggattacggcggatagccgcaaggtccagcaggcc
atgcttttcgtagcggttgctggaaacaaggcggatggcgcgactttcgtgcaggacgcg
atttccaaaggtgcagccgccatcgtttccagccagccgctcaatgtcagtgtgccggtt
ctcgtcgtttccgatgcaaggctttatctcgcgctttcagccgcccgcttttatggcagg
cagccggaaaccatggttgccgtaaccggtacggcgggcaagacatccgttgcttccttc
acgcgccagatatgggcttttgccgggcatcccgcagcgcagatcggcacgactggcgtc
atcgcgccgggccgtgaggaatatggttcgctgaccacgcccgatccggtttcgctgcac
gcgctcctggccgaactggccgatgagggcgtgacgcatgcggccatggaagcgtccagc
catggtctggaccagcgccgtcttgacggcgtgaagctttccgctgccggtttcaccaat
cttggccgtgatcacatggattaccacccaacggtggaagactatatggctgcgaagatg
cggctgttcgagacgcttctgcccaagggttcgcccgtcatcatattcgctgacgatcca
tggtctgcacaggcaatagacgtggcgacgaaggctgggcatgatgtgcgcaccgttggc
cgcaagggcgattatctttcgctgaagcgcgtcgagcatttccgccacaagcagatgatc
gaagttcaccacgagggcgcgatctacgaggtggatattccgctggcgggtgattttcag
gtggcgaatgcgctggtttccgctggccttgccatgtccaccggcgtttccgcgtccgtt
gcgatgaaggcgctggaaaagctgattggcgcggcggggcgtctggagctcgttggccac
tccggaaacggggcgctggcttatgtggattacgctcacaagccggattcgctggaaaag
gtgctgacatcggtgcgtcctttcacctccgggcgcatcatcaccgtgttcggttgcggt
ggtgatcgcgacaagggtaagcgcccgatcatgggcgaggtggcaacgcggctttccgat
atcgtgatcgtgacagacgacaatccacgctccgaggagccagccacgatccgttccgag
atcatggcggcggcaccgggtgcgctggaaattgcagaccgggcggaggcgatccgccac
gccgtatccatgctggggaatggagacacgttgatcgtagcgggcaaggggcacgaggaa
ggtcagatcattggcggcgtgacgctgccgttttccgaccatgaacaggtgcgttccgcg
ctggaaggattgaagatttga
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