Agrobacterium larrymoorei: CFBP5473_08675
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Entry
CFBP5473_08675 CDS
T06268
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
CFBP5473_08675 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alf03000
]
CFBP5473_08675 (dksA)
03021 Transcription machinery [BR:
alf03021
]
CFBP5473_08675 (dksA)
03009 Ribosome biogenesis [BR:
alf03009
]
CFBP5473_08675 (dksA)
Transcription factors [BR:
alf03000
]
Prokaryotic type
Other transcription factors
Others
CFBP5473_08675 (dksA)
Transcription machinery [BR:
alf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
CFBP5473_08675 (dksA)
Ribosome biogenesis [BR:
alf03009
]
Prokaryotic type
rRNA transcription factors
CFBP5473_08675 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DUF1003
Motif
Other DBs
NCBI-ProteinID:
QCI97976
UniProt:
A0A4D7DUJ9
LinkDB
All DBs
Position
circular:complement(1823700..1824119)
Genome browser
AA seq
139 aa
AA seq
DB search
MSEKIDLSNYVLSESDEFMNTNQRAYFRAKLVGWKNDILREARETLGHLAEESANHPDLA
DRASSETDRAIELRARDRQRKLISKIDAALQRIEDGTYGYCEETGEPIGIKRLDARPIAT
LSIEAQERHERREKVYRDE
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgagaagatcgatcttagcaattatgtgctctcggaaagcgacgagttcatgaac
accaatcagcgagcctactttcgggcgaagctggtcggctggaaaaacgacatattaaga
gaagcgcgcgagaccttaggtcatctcgcagaggaaagcgccaatcatcccgatctcgca
gaccgggcatcttctgagacagacagagcaatcgaacttcgtgcccgcgaccgccagcgc
aaattgatctccaagatcgatgcagcacttcagcgtatcgaagatggaacatacggctac
tgcgaagaaaccggcgagcccatcggcatcaagcgcctagacgcccgccccatcgccacg
ctctccatcgaagcccaggaacgccacgaacgccgcgaaaaagtctatcgcgacgagtga
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