Agrobacterium larrymoorei: CFBP5473_21915
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Entry
CFBP5473_21915 CDS
T06268
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
alf
Agrobacterium larrymoorei
Pathway
alf01501
beta-Lactam resistance
alf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFBP5473_21915
01503 Cationic antimicrobial peptide (CAMP) resistance
CFBP5473_21915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alf03036
]
CFBP5473_21915
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alf02000
]
CFBP5473_21915
01504 Antimicrobial resistance genes [BR:
alf01504
]
CFBP5473_21915
Chromosome and associated proteins [BR:
alf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CFBP5473_21915
Transporters [BR:
alf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CFBP5473_21915
Antimicrobial resistance genes [BR:
alf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CFBP5473_21915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
BSH_CusB
Beta-barrel_RND_2
YknX_C
HH_YBHG
BSH_CzcB
CzcB_C
HH_MFP_RND
BSH_RND_rel
HH_EMRA
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QCJ00659
UniProt:
A0A4D7DWC0
LinkDB
All DBs
Position
pAlCFBP5473:complement(174084..175337)
Genome browser
AA seq
417 aa
AA seq
DB search
MSIDTQICIFTFRMYVKYISAHQPVSPSARETEGHKTMRRDRFTRTLTATSLAYPLLFAA
VYAQDQPPPQVAVTHVQKQDFTLTARLPGRIKPSTTSEIRPQVSGIIRERLFEEGGKVEA
GQILYKIDDETYVAAVESAKANVAQAQASYDFAVIDARRAEETFANNVSSASTRDTKIAE
REKAQAALQVAQAQLRTAEIDLARTTIRAPISGVIGFSDTTPGALVAAQQTSPLTTVRAL
DTIYVDVTQSINDLLRWNADKSSGDARASAIATMILPNGTPYPLKGDLRAAEPRVEPTTG
MVTLRIAFNNPEDRLLPGLYVEVELPQATTRGAILVPQSAVMRNAKGEASVWVVENGKIV
VRPVKIVAADGNQWVTESGLKAGEAVVTSGFQKAKPGVAVQIEQQPSIEPPKQVGSN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatagatacgcaaatttgtatatttacattccgtatgtatgtaaagtacatatcg
gcccaccaaccggtttccccctcggcccgagagacagaaggtcacaagactatgagaaga
gacagatttacgagaaccttgacagctacgtcgctagcttatccgcttctctttgctgca
gtttatgcgcaagaccagccccctccacaagttgcagtgacgcacgtacaaaagcaagac
ttcacccttaccgccaggctgcctggtcggatcaaaccctccacaacatctgagattcgg
ccccaagtgtcaggtatcatccgcgagagactgttcgaggaaggcggcaaggttgaagcc
gggcagatactctacaagatcgacgacgaaacttatgttgccgctgttgaatccgctaaa
gcaaatgttgcccaagctcaggcaagctacgattttgccgtaattgatgcgcggcgcgcc
gaggaaacatttgcgaacaatgtgagctcagcatcaactcgcgatacgaaaatagctgaa
cgggaaaaggcgcaggcagcgctgcaggtagctcaagctcaactgcggacagccgaaatc
gacctagcacgaacaaccataagagctccaatttcaggcgtcatcggtttctcggacaca
actcccggagctctcgttgctgcacaacagacgtcgcctctgacaaccgttcgagcactc
gacacaatctacgttgatgtcacgcagtcgatcaacgaccttttgcgatggaacgcagat
aaaagctctggcgacgccagagcctccgcaatcgcaacgatgatcctaccaaatggcacg
ccctacccgctcaagggcgatcttagagctgcagaacctcgggtagaaccaaccacggga
atggtcacgctcaggatcgcttttaacaatccagaggaccggcttttgccagggctttac
gtcgaagtcgaactcccgcaggccacaacgcgcggagctattctcgtgccacagtccgct
gtgatgcgcaacgcgaagggtgaggcatcggtctgggtcgttgaaaacggaaaaatcgta
gtccgtccagttaagattgtcgccgctgatggcaatcagtgggtcacggaaagtggattg
aaggcaggagaagcagtcgtcacatcgggtttccagaaagccaaacctggcgtcgccgtg
caaattgagcagcagccctcaattgaacccccaaagcaagtcgggagcaactga
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