KEGG   Agrobacterium larrymoorei: CFBP5473_23750
Entry
CFBP5473_23750    CDS       T06268                                 
Name
(GenBank) type IV secretion system protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
alf  Agrobacterium larrymoorei
Pathway
alf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:alf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CFBP5473_23750
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alf02044]
    CFBP5473_23750
Enzymes [BR:alf01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     CFBP5473_23750
Secretion system [BR:alf02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   CFBP5473_23750
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DUF1657
Other DBs
NCBI-ProteinID: QCJ01209
UniProt: A0A4D7DY77
LinkDB
Position
pTiCFBP5473:169260..171278
AA seq 672 aa
MNSGKYTPTRLAASIACSLAVGFCAASLYVTFRHGFTGETMMTFSVLAFLYETPPYLGYA
SPTFYRGLVIIFAASTLVLLCQVLISMRERDHHGTARWALSSEMRHARYLQRYSHVTGPI
FGKTCGPHWFGSYLTNGEQPHSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFEL
TSRARKSSGDAVFKFSPLNPERRTHCYNPVLDIAALPPERRFTETRRLAANLITAKGKGA
EGFIDGARDLFVAGILSCIERGTPTIGAVYDLFAQPGEKYKLFAQLAEETQNKEAQRIFD
NMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDLRRKKTCIYLCVSPNDL
EVVAPLMRLLFQQVVSILQRSLPLGDERHEVLFLLDEFKHLGKLEAVETAITTIAGYKGR
FMFIIQSLSALTGTYDEAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFQARSTSY
SQARMFDHNIQISDQGAPLLRAEQVRLLDDDHEIVLIKGQPPLKLRKVRYYSDRMLKRLF
ERQMGPLPEPVSLMLSKENYQQIQNLSQHGVVVPEQSVGDMVSMVGNEEAAEKQSSNING
GPESVTIGRDTPPRSIEITAMEKGANSGGMPLDSSLTPEMAPALIAQQQLLEQIIELQER
YRSTPPPPVTWP
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaattcgggcaaatacacgccgacacgcctagctgcaagcattgcatgttcacttgcc
gttggtttctgtgcagcaagtctctatgtcacatttcgccatggctttacgggcgaaacg
atgatgactttcagcgttctcgcgttcctgtacgagacaccgccttatttgggatacgca
agcccaacgttctatcgcggacttgtcatcatctttgcggcgtcgacgctcgtattgcta
tgccaagtattgatatcgatgcgcgagcgcgatcatcacggcactgctcgctgggccctg
tccagcgagatgcgccacgccagatacctccagcgctacagtcacgtcacaggacccatc
ttcggcaaaacatgtggaccacattggtttggcagctacctaactaatggagaacaacct
cacagcctcgtcgtcgcgccaactcgcgctggtaagggtgtcggcgtcgttatccccacg
ttgctaaccttcaagggttcagtaattgctctggatgtgaaaggcgagctattcgaactc
acatcaagggcgcgtaaatcaagtggtgacgcggttttcaagttctcgcccttaaatcca
gagcggcgaacgcactgttacaatcccgtgcttgacatcgccgcgttgccgcccgaacgg
cgctttacggaaacgcgccgccttgctgcgaatctcatcacagccaaaggcaagggtgcg
gagggtttcatcgacggtgcacgagatcttttcgttgcaggcatattgagttgtattgag
cgcggtactccgacgattggcgcggtttacgatctgttcgctcagccgggtgaaaaatac
aaactatttgcccagctcgcggaggaaactcaaaacaaagaggctcagcgcatcttcgac
aatatggcgggaaatgacaccaaaatactgacgtcttacacatcggtgctcggcgacggc
ggcctcaatctttgggccgatccactcgtcaaggcggctacaagccgctcggatttttcc
gtctacgatttgcggcggaaaaagacctgcatttatctttgtgtcagtccgaacgatctg
gaagtcgtagcgccgttgatgcgtcttctcttccagcaggttgtatcaatcctgcagcga
tcgctgccccttggggatgaacggcacgaggttctgtttctcctcgatgagttcaagcac
ctgggcaagctggaagccgtagaaacggcgattacgacaattgcgggctacaaaggccgc
ttcatgttcatcatacagagcctgtctgctttgacgggaacttatgatgaagctggtaaa
caaaatttccttagcaataccggtgtgcaggtattcatggcgaccgctgatgacgagacg
ccaacctacatttctaaagctatcggtgactatacgtttcaagctcgctcaacgtcgtac
agccaagcgcgcatgtttgatcataacatacaaatctccgaccaaggagcgccgcttctg
cgcgccgaacaggtccgtctactcgacgacgaccatgaaatagtccttattaaagggcag
ccgcctcttaaactgcggaaagtgcgatattattcggatcgtatgctgaagcgccttttc
gaacgccaaatgggccctctccctgagccagtatccttgatgctatcgaaagaaaattac
cagcagatccaaaacctcagccaacacggcgtcgtagtgccagagcaaagtgtgggcgac
atggtttctatggtaggcaatgaggaagccgcagaaaagcaaagcagcaatatcaacggc
ggcccagagagtgttacaattgggcgtgacactcccccacgctcgattgaaatcactgcg
atggagaaaggcgctaattcaggtggtatgccactagattccagtcttacccccgaaatg
gctccggctctgattgcgcaacagcaactgctagaacagattatagagcttcaggaacga
tatagatctacgcctccaccgccggtgacatggccttaa

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