Algoriphagus sp. NBT04N3: GYM62_08290
Help
Entry
GYM62_08290 CDS
T09623
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00270
Cysteine and methionine metabolism
algo00450
Selenocompound metabolism
algo00670
One carbon pool by folate
algo01100
Metabolic pathways
algo01110
Biosynthesis of secondary metabolites
algo01230
Biosynthesis of amino acids
algo04980
Cobalamin transport and metabolism
algo04981
Folate transport and metabolism
Module
algo_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GYM62_08290 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GYM62_08290 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GYM62_08290 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GYM62_08290 (metH)
04980 Cobalamin transport and metabolism
GYM62_08290 (metH)
Enzymes [BR:
algo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
GYM62_08290 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
MtrH
Motif
Other DBs
NCBI-ProteinID:
QYH38795
LinkDB
All DBs
Position
complement(1901513..1904230)
Genome browser
AA seq
905 aa
AA seq
DB search
MKIEEQAMNDYLKLSGLEPLVFTPNLNFVNIGERTNVTGSKKFARLILNGNYDEALEVAL
DQVRGGAQVLDVCMDEGMLDGEAAMVKFLNLIASEPEISRIPIMIDSSKWSIILAGLKCV
QGKGIVNSISLKNGEEEFIHQAKTIKKFGAAVVVMAFDEKGQADTYERRIQICERSYRIL
VDRVRFNPQDIIFDPNIFPVATGMEEHRKNALDFFLATKWIKENLPGAKVSGGVSNVSFS
FRGNDRVREAMHAAFLYHAIHHGMDMGIVNPTMLEVYDDIPKDLLERVEDVFFDRKEDAT
ERLLEFADTVKSSGKKEVVNEAWRSDPVAKRIEHALVKGILDFIIEDTEEARQLLQNPLK
VIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKKAVAYLEPFMPLPEEGQEDSSLKKI
LLATVKGDVHDIGKNIVGVVLACNSYQIIDLGVMVDAQKIIDEAIKNKVDIIGLSGLITP
SLDEMVNVASEMERQGLKIPLLIGGATTSRIHTAVKIDPVYSGTVIHVTDASKSVPIAGE
SISEETRDQYHLDIKETYKRLREEHEAKQSAKQLISYSEAMENPVEIDWTAFEPIEPKVL
GTQILDDLDLNEIRKYIDWTPFFSTWMLSGKYPKILEDPVVGSEAKKLFNDAQRMLDQLI
DEKWLTAKGVFGLFPVQRKGDDAVVFSPEKKGLTLGQFHFLRQQGKKGKGVPNRSLADYL
HPEKVDYMGCFAVTSGLGMESKLAEFQKAGDDYNDILFKALADRLAEAAAEYLHEQVRKN
YWGYAPEENLENDSLIREEYTGIRPAPGYPACPEHSEKETIASLLEMEKAIGITLTSSYA
MYPTSSVSGFYFAHPDAKYFGLGKIAQDQVESYAKRKGISLEDAERLLSPNLAYTPAKLL
VNQTV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaggagcaggcaatgaatgactatttgaaattatcaggccttgagccttta
gtatttacacccaacctgaattttgtcaacattggagaaagaaccaatgtgacaggctcc
aagaaatttgcccgtttgattttgaatgggaattatgatgaggccttggaggtagcatta
gatcaggtacgtggaggagctcaggttctggacgtttgtatggatgaaggaatgctggat
ggagaagcggcaatggttaagtttttgaacctaatcgcttcagaacccgaaatcagccga
attcctataatgattgacagttccaagtggagtatcattttggctggtttgaagtgcgtt
cagggcaaaggaattgtaaattcgatatctctcaaaaacggggaggaagaattcatccat
caagccaaaaccatcaagaaatttggagccgcggtagtagtaatggcattcgacgaaaaa
ggtcaggcggatacctatgagaggagaattcagatttgtgagcggagttataggattttg
gtggatagggtacgatttaatcctcaggacatcatttttgatcccaatatattcccggtt
gcaacagggatggaagagcatagaaagaatgcattagacttcttccttgctaccaaatgg
atcaaagaaaatctgcccggagcaaaagtaagtggcggggttagtaatgtatctttttca
tttagaggaaatgaccgagtgagagaagctatgcatgcagcttttctttatcatgcgatt
catcatggaatggatatgggtatcgtcaaccctaccatgctggaagtctatgatgatatt
cctaaagacttattggagcgggttgaggatgtcttttttgatagaaaagaagatgctacc
gaaaggctcttggagtttgcagacactgtcaaatcttctggcaaaaaagaggtagtgaat
gaagcttggcgttctgatcctgtggcaaagcgaattgagcatgccttggtaaaaggtatt
ctcgattttattattgaagatacggaggaagccagacagctacttcaaaacccattgaaa
gtcattgaaggcccattaatggacgggatgaatgtggttggagatctttttggggaaggc
aagatgtttttgccccaggtggtgaagtctgccagagtgatgaaaaaggctgtagcctat
cttgagccattcatgccactgccggaagaaggtcaagaggacagttccctgaagaaaatt
ttgctggcaacagttaaaggggatgtgcatgatatcggtaaaaatatcgtaggagtcgtg
ttggcttgtaatagctatcaaatcattgatttgggagtgatggtagatgcccaaaagata
attgatgaagcgattaaaaataaagttgatattataggattgagtggattgattactcct
tctttggatgaaatggtcaatgtggcatcagaaatggagcgccagggattgaaaattcct
ttgctgataggtggggccactacttccagaattcatactgctgtaaaaattgatcctgtg
tattccggaacggtgatccatgtaactgatgcaagtaagtctgtgcctattgcgggtgaa
tccatttctgaggagactagggatcaatatcatctagatatcaaggaaacttacaagcga
ttgagagaagagcatgaggccaaacaatccgccaaacaattgatttcctattcagaggct
atggaaaatcctgtggaaattgattggactgcttttgaacctattgaaccgaaggttttg
ggaacccaaattttggatgatttggatttaaatgaaatccgaaaatatattgactggacc
ccattcttcagtacatggatgttaagcgggaagtatcctaaaattcttgaagatccagtc
gtgggtagcgaagcaaaaaagcttttcaatgatgcccaaagaatgttggatcagttgatt
gatgaaaaatggttgactgcaaaaggtgtttttggactgtttcctgttcagagaaaagga
gatgatgcggttgtattcagtcctgaaaagaaaggtttgactctgggtcaatttcacttt
ttgagacagcaaggtaaaaaaggaaaaggggttccaaaccgttctttagctgattacctg
catcccgaaaaggtggattacatgggttgttttgcagtaacttctggattgggaatggag
tctaaattggcagaatttcaaaaagccggggatgattacaatgatattttgtttaaggcc
ttagcggatagattggcagaagcagcagccgagtatttacatgagcaagtccgaaaaaac
tattggggctatgcgcctgaggagaatttggaaaacgattccttgatccgagaagaatat
acaggaatccgacctgcacccggctatccagcctgtccagagcattctgaaaaggaaact
atcgccagcctattggaaatggaaaaagccattggaatcactttgacttcaagttatgcc
atgtatccgactagttctgtttcagggttttattttgcccatccagatgcgaagtatttc
ggcttaggaaaaatcgcccaagatcaagtggagagttatgcgaagagaaaaggcatcagc
ctagaagatgccgaaagattattatcacccaatttggcctatacgcctgctaaattactt
gtgaatcagactgtatga
DBGET
integrated database retrieval system