Algoriphagus sp. NBT04N3: GYM62_11345
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Entry
GYM62_11345 CDS
T09623
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo01501
beta-Lactam resistance
algo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GYM62_11345
01503 Cationic antimicrobial peptide (CAMP) resistance
GYM62_11345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
algo03036
]
GYM62_11345
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
algo02000
]
GYM62_11345
01504 Antimicrobial resistance genes [BR:
algo01504
]
GYM62_11345
Chromosome and associated proteins [BR:
algo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GYM62_11345
Transporters [BR:
algo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GYM62_11345
Antimicrobial resistance genes [BR:
algo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GYM62_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
OEP
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QYH39348
LinkDB
All DBs
Position
complement(2623170..2624360)
Genome browser
AA seq
396 aa
AA seq
DB search
MKTEKQVSFSKGKTYAKILLSITILSALVVGINSCTEVKSKNTTEKEEPLIPILELQPQT
VEVPQTYICDIQAIQFVEVRSKVEGFVNQIFVDEGQHVKKGQKLFQLSSAEYNELVNSAR
ANLMKAKAEEKAAKVERERLLVLVEKNIISKSELELANSKLSVAESQIAEAEAQLKGAQM
GLSYTTVKAPFDGIVDRIPHKIGSLVNENDLLTSITDISSVFAYYKVNESEYLSFMRTQI
EGNDFSSLDDKLSLILSDGEKYPEKGRLETTEGDIEEKTGSIGFRVRFPNPDKLIKHGAS
GKIQMMSNLTDVFLIPQKATFEIQDFTYVYVVDKENVVKVRSFKPLQRMGVYYIAQGFEP
GDRIVLEGIQQLQDGAKILPQAIAAGDVYSDMISSN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaaaaacaagtaagtttttccaaagggaaaacttatgctaaaatcctatta
tccattaccattctaagtgcattagttgtaggtattaattcctgcacagaagttaaatcc
aaaaataccactgaaaaagaggagccgcttattccaattttggaactgcagcctcaaaca
gtggaggttcctcaaacatacatctgtgatattcaagcgattcagtttgtagaagtaaga
tccaaagtagagggttttgtaaatcaaatattcgtggatgaaggtcagcatgtgaaaaaa
ggccaaaagctttttcagctatcatccgctgaatacaatgagttggtgaattcagcaaga
gctaatttgatgaaggctaaagctgaagaaaaagcagccaaagtcgaaagagaaaggcta
ttggtactggtggagaaaaatattatctccaaatcagaactggagttagctaattccaaa
ctctctgtagctgaatcccaaattgcagaggctgaagctcagctaaaaggtgcccaaatg
gggctttcctatacgactgtaaaagctccttttgacggaatcgtggatcgcattcctcac
aaaatcggcagcttggttaatgaaaacgacttactgacatcgataacagacatctcttct
gtatttgcttattataaagtcaatgagagtgaatacctcagctttatgcgaactcaaatt
gaaggaaacgatttctcatcgcttgacgacaagctttctttgattctttccgatggagaa
aaatatcctgaaaagggccgcttggaaaccacagaaggcgatattgaagagaaaaccggt
tctattggtttcagagtacgttttccaaacccggataaattgatcaagcatggtgcttct
ggtaaaatccagatgatgagcaatttgactgatgtattcttgattcctcagaaggcgact
ttcgaaatacaagattttacctatgtctatgtagtagataaggaaaatgtagtgaaagtg
agaagcttcaagcctcttcagaggatgggtgtttattacatagctcaaggttttgagcct
ggagacaggattgttttggaaggaattcaacagctacaagatggcgcaaaaatccttcct
caggcaattgctgcaggtgatgtttactcagacatgatttcctctaactaa
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