KEGG   Algoriphagus sp. NBT04N3: GYM62_11985
Entry
GYM62_11985       CDS       T09623                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
algo  Algoriphagus sp. NBT04N3
Pathway
algo01501  beta-Lactam resistance
algo01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:algo00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    GYM62_11985
   01503 Cationic antimicrobial peptide (CAMP) resistance
    GYM62_11985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:algo03036]
    GYM62_11985
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:algo02000]
    GYM62_11985
   01504 Antimicrobial resistance genes [BR:algo01504]
    GYM62_11985
Chromosome and associated proteins [BR:algo03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    GYM62_11985
Transporters [BR:algo02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   GYM62_11985
Antimicrobial resistance genes [BR:algo01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    GYM62_11985
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 Biotin_lipoyl
Other DBs
NCBI-ProteinID: QYH39467
LinkDB
Position
complement(2781267..2782358)
AA seq 363 aa
MNNHRLTLIVGLFALLFQTACNSHHQSKEEESTFLVTSPIVKDTVIYKEYVSQIHSIQHI
ELRALEKGYLQNIYVDEGQFVKKGQLMFRIMPTIYKAEAQRAKAEANFAEIEYLNTKSLA
DNNVVSPNELALAQAKFEKAKAELNLAETHLGFTEIRAPFDGIMGRFLVRQGSLLDEGEL
LTTLSDNNQMWVYFNVPEAEYLNYVSSNTLEKLPNVILQMANNKEFEEKGKIETIEADFN
NETGNIAFRATFPNSKKILRHGETGNIKMPVIYEDALIIPQKATFEILDKKFVFVVDKDG
LVNSKQITVLTELPHLYIIAPDLGEDDKILIEGLRKVENKQRIKFDFVHQEKVLAELNGL
HAE
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgaataatcatagattaactttgattgtgggcttgtttgcgcttttatttcaaactgcc
tgcaattcacatcatcaatccaaagaagaagaatctacttttttggtcactagtccaatt
gttaaggacacagttatttacaaagaatacgtcagtcaaattcattctatacagcacata
gaattaagagctttagagaaaggttaccttcaaaacatttatgtggatgagggtcaattt
gtcaaaaaaggacaattgatgtttcgcatcatgccaactatctacaaagcagaggcacaa
cgtgcgaaggctgaggcaaattttgcggaaatagaatacctcaataccaaaagccttgca
gacaataatgtggtttctcccaatgaattagcattggctcaggcaaaatttgaaaaggcc
aaggcagaactgaatcttgccgaaacgcatcttggatttacagagattagagctccattt
gatggcatcatggggcgttttctggtaagacagggtagtttgcttgatgaaggtgagctt
ctaaccacactatcagacaataatcagatgtgggtttatttcaatgtgcctgaagccgaa
tatctcaattatgtttcttccaacacgctggaaaagttgcctaatgtgatattgcagatg
gctaacaacaaggagtttgaggaaaaaggaaaaattgaaactattgaggcagatttcaat
aatgaaacaggaaatattgcctttcgggcaaccttcccgaattctaagaaaatccttaga
catggagaaacagggaatatcaaaatgcctgttatttatgaagatgccttaataatacct
caaaaggcaactttcgaaatattggataaaaagtttgtctttgttgtcgacaaggatggt
ttagtcaactccaaacaaatcacggtattgactgaacttccacatctctatatcattgct
ccggatttaggggaggatgataaaattctgatcgaagggctccgaaaagttgagaacaaa
cagcgaatcaaatttgatttcgtgcatcaggagaaggtgttagctgagctaaacggatta
catgctgagtaa

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