Algoriphagus sp. NBT04N3: GYM62_15115
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Entry
GYM62_15115 CDS
T09623
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo01501
beta-Lactam resistance
algo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GYM62_15115
01503 Cationic antimicrobial peptide (CAMP) resistance
GYM62_15115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
algo03036
]
GYM62_15115
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
algo02000
]
GYM62_15115
01504 Antimicrobial resistance genes [BR:
algo01504
]
GYM62_15115
Chromosome and associated proteins [BR:
algo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GYM62_15115
Transporters [BR:
algo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GYM62_15115
Antimicrobial resistance genes [BR:
algo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GYM62_15115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QYH40053
LinkDB
All DBs
Position
complement(3480082..3481116)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVNKLHIALWFSVILAGCSSGENTSSESAKHISLNVKTEEVIQFKGSHTVGYSGVVVPK
KNTPLSFSVPGTVSKIAVEEGQQVNKGQLLAQLNPSTMENTYQMAFQKLQQAQDAYNRLM
PMHENGTLSEIKWVEVETGLSQAKSATAIAKKGLDDTKLYAFTAGVIGKKSIQEGENVFP
NITVFELFDISKVYVKIPVPEDEISSFKKGDQAIITVGAISKTITGIVREIGVSADIFSH
SYPVRLEVDNSDLAIKPGMVCTVNFATQNKATGVLISNKAMQQDLQGTQFVYVIENNTAQ
KRAVKTIALIDQKILVSGNLKEGDKIIVAGQDKLRQGSQVNIIK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaataaactgcacatcgctctttggttttccgttatcctggccggatgctcg
tcaggagagaatacatcatcggaaagtgcgaagcacatttcccttaatgttaaaacagaa
gaagtaattcaatttaaaggaagccatacagttgggtattccggggttgtggtgccaaag
aaaaatacaccactcagtttctcggtgccgggaaccgtttcgaaaatagcagtagaagaa
ggacagcaggtaaacaaaggccagttgctggcacaactaaatccatcgactatggagaac
acctaccagatggcatttcaaaaattacaacaggcacaggatgcgtataaccggttaatg
ccgatgcatgaaaatggtaccctgtctgaaataaaatgggtggaggtagaaacaggatta
agtcaggcaaaatcggctacagccattgcaaaaaaaggacttgacgatacaaaactatat
gcttttacagcgggtgtgataggtaaaaaatcgattcaggagggagagaatgtatttcca
aatattacagtttttgaattattcgacatcagtaaagtatatgtaaaaattcccgtacca
gaagatgagatcagttcgttcaaaaagggagatcaggccatcattactgttggagctatc
tctaaaacaatcaccggtattgtaagagaaattggtgtttcggctgatatattttcacac
tcctatccggtaagacttgaagttgacaattctgatttagccattaagccgggtatggtt
tgtacagtcaactttgcaacccaaaacaaggcgaccggtgttcttatctctaacaaagca
atgcagcaggatttacaagggacgcagtttgtatatgtgatagaaaataacacggctcaa
aagcgagcggtgaaaaccattgctttaatcgaccaaaaaattctggtcagcggaaatttg
aaagaaggtgataaaatcattgtggcagggcaagacaaacttcgccagggctcacaggta
aacattataaaatag
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