Algoriphagus sp. NBT04N3: GYM62_16205
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Entry
GYM62_16205 CDS
T09623
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo01501
beta-Lactam resistance
algo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GYM62_16205
01503 Cationic antimicrobial peptide (CAMP) resistance
GYM62_16205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
algo02000
]
GYM62_16205
01504 Antimicrobial resistance genes [BR:
algo01504
]
GYM62_16205
Transporters [BR:
algo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GYM62_16205
Antimicrobial resistance genes [BR:
algo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GYM62_16205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYH40259
LinkDB
All DBs
Position
complement(3719719..3722781)
Genome browser
AA seq
1020 aa
AA seq
DB search
MASLSNLSINRPVLAIVMSLIILLFGAIGISLLGIREFPSVDPPIINVRTNYVGANADVI
EAQITEPLEEAINGIQGIKSLTSTSNDGASSITVEFDVGADLEAAANDVRDKVSGAQRNL
PPDAEPPVVSKADADSQPIVFLNVKSDERSLLDLSDIAQNIFKERLQTIPGVSRVQIWGE
KEYAIRLRMDPLKMASYGVTPLDVLSKVQSENVELPSGRIEGETIELSVRTKSRLSSPQE
FNQLIIKESENNIVRFQDVGKAELAALNERTVLKRDGVPMVGVVLVPLPGSNNIEIVDEF
YRRLEFIKKDLPADVGLEIGFDSTTYIRNSIAEVQETIITAFILVVAIIFLFLRDWRTTF
IPVLTIPISLIGVFFVMYLMDFSINVLTLLGIVLSIGLVVDDAIVVLENIYARIEKGEKP
LQAAQKGAEEIFFAVIATTVALAAVFLPVIFLTGTTGRLFREFGIVVAGSVIISSFVALT
MTPMLSSKLLKRREKHNWFYNFTEPGFVWLNNQYDRALSWFMNFRWVAFLLIIFMGGGIY
WLFNEIPSELAPTEDRGELRINMAGPEGATFDYMDRVIDQMVGDFLESFPEEEVSGLISV
TSPGFGTASTNSGFVRFILTDAENRSRSQNDIFNEVNAKLRTYTSVRAFAAQPQSIGDRR
GGLPVQYVLQAPTLEKLKEKIPTFMEEVNKSDKFIFADINLKFTKPELEIEIDREKARNI
GVSVQEIARTLQLSYSGQRFAYFIMNGKQYQVVGEMQIEDRNEPINLRMLYVRAENGQLV
QLDNLVTVVEKSTPPQLYRFNRFVSATVSANLAEGFTIGDGLDEMDRIAAEVLDDSFATD
VSGPSKEFRESSNSLIFAFLFALVLIYLVLSAQFESFLDPLTIMFTVPLAIFGALLTLWA
FDFTLNIFSQIGIIMLIGLVTKNGILIVEFANQRKASGMDVKEAIYGAAVARFRPILMTS
LSTILGILPIALALGAGAESRVPMGAAVIGGLAFATILTLFIIPAIYTYLTSKEGRLARI
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttatcgaatttaagtattaacaggccagttttggccatcgtgatgtccctg
atcattttattgttcggggccatcgggatatctcttttgggtattcgagagttccccagc
gttgatcctccaatcattaatgtcagaaccaattatgttggagcaaatgctgatgtaatc
gaggctcaaatcaccgagcccttggaagaagctatcaacgggattcaggggattaaatct
ctgacctctacttccaatgacggtgccagtagtattaccgtggaatttgacgtgggagca
gatttggaagcggcagcaaatgacgtgagagataaggtttccggagcacaaagaaactta
cctcctgatgctgaaccaccagttgtatccaaggcggatgctgactctcagcccatcgtt
ttcctcaacgtaaaaagtgatgaaagaagtcttcttgacctttcagacatcgctcaaaat
attttcaaagaaagacttcaaaccatcccgggagtcagtagagtacagatttggggagaa
aaagaatatgccattcgactaagaatggatccattgaaaatggcttcttatggagtaacc
cctttggatgttctttcaaaagttcagtccgaaaacgtagagctgccatccggaagaatt
gaaggcgagactattgagctttcggtaagaacgaagagccgtctgtcttccccgcaggaa
tttaaccaacttatcattaaggaaagcgagaataatattgttcgctttcaagatgtggga
aaagcggaattagccgctttaaatgaaagaactgtcctaaaaagagacggtgtcccaatg
gtaggggtagttttggttcctctaccaggttcaaacaatattgagattgttgatgaattt
tacagacgtttagagtttatcaaaaaggatttaccggctgatgtaggtttggaaatcgga
tttgactctacaacctatattagaaactccattgcggaggttcaggaaacaattattaca
gcctttattctggttgtagctattattttcctctttttgagggactggagaactacattt
attcctgttttaaccataccgatttccctgataggagtattttttgtcatgtacttgatg
gatttttctatcaacgtattgacactattaggcatcgttctatccattggattggtggtc
gatgacgcgattgttgtattggagaatatctatgcacggatagaaaaaggggagaaacca
ctgcaagccgctcaaaaaggtgctgaggaaatctttttcgcagtaatcgcaaccacagtg
gcattggcggcagttttcctgccagtaatattcctgacagggacaactggccgacttttc
cgagaatttggaatcgttgtggcaggctctgtgattatttcctcttttgtcgcattgacc
atgacgccaatgctcagctctaaattgttgaaaagaagagagaaacataattggttttat
aattttaccgagcctggatttgtttggctaaacaatcaatatgaccgagcattaagctgg
tttatgaacttcagatgggttgctttcctgctcatcatattcatgggtggggggatctat
tggttattcaatgaaattccttccgaattggctcctaccgaggatagaggggagctaaga
atcaacatggcaggtccagagggtgctaccttcgattatatggaccgtgtgattgatcaa
atggtaggagatttcttggagtctttccctgaggaagaagtatctggtttgatttcagtt
acatccccgggttttggtacagccagtactaactcaggattcgtacgatttattttaact
gacgctgagaatagatctcgaagtcagaacgatattttcaatgaggtgaatgcaaaactc
agaacctatacatctgtaagagcatttgccgcacagccccaatcaataggtgatcgtcgt
ggaggcttgccagtacagtatgtgctccaggcacctactttggaaaagctgaaagagaag
attccaacatttatggaggaggtgaataaaagtgataagttcattttcgcagatatcaac
ttgaaattcacaaaacctgagcttgaaatagaaattgatcgggaaaaggcaagaaatatc
ggggtgtctgtacaggaaatagcacgaaccctacaactttcctattcaggtcagcgattt
gcctacttcatcatgaatggtaaacagtatcaagtggtcggagaaatgcaaattgaggat
aggaatgagccaattaatcttaggatgctttatgtaagagcagagaatggtcaactggtg
caattggataatctggtaacagttgtcgaaaaaagtactccaccgcaactatatagattc
aatagatttgtttctgcaacagtatcagctaaccttgccgagggttttaccataggtgat
ggtctagatgaaatggatagaatcgctgctgaggtattggatgactcctttgccactgac
gtatcaggaccttccaaggagtttagagaaagctccaatagcttgatctttgcttttctt
tttgccttggttttgatctatttggtcctttcagcccaatttgagagcttcttagatccg
ctgactatcatgtttaccgtgcctttggcaatctttggagcattacttaccctatgggct
tttgattttacactcaacatttttagtcagattgggatcatcatgctcattggcttggtt
accaaaaacggaattttgattgtagaatttgccaatcagcgaaaagctagtgggatggat
gtgaaggaagcaatttatggagcagccgtggcccgatttagacctattttgatgacttct
ctttccacgattttggggattcttccaattgcactggcattgggagcaggtgctgaaagt
agagttcctatgggagctgccgttattggagggcttgcttttgcaaccatacttaccttg
ttcattatccctgcgatttatacatacttgacttctaaagaaggaagattagccagaatt
tga
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