Algoriphagus sp. NBT04N3: GYM62_17615
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Entry
GYM62_17615 CDS
T09623
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYM62_17615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_17615 (nth)
Enzymes [BR:
algo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GYM62_17615 (nth)
DNA repair and recombination proteins [BR:
algo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYM62_17615 (nth)
Prokaryotic type
GYM62_17615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QYH40525
LinkDB
All DBs
Position
4053198..4053869
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AA seq
223 aa
AA seq
DB search
MLKKERYEAFINYFSENMPVAETELQYEDPFQLLVAVVLSAQCTDKRINMVTPALFRDFP
TPAHLAASHFDELFPYIKSVSYPNNKTKHLLGLGKMLMEEFGGKVPETVAELTKLPGVGR
KTANVITSVVWNQPNMAVDTHVFRVSRRLGLVPQTAKTPLEVEKHLIRHIPKEHVHKAHH
WLILHGRYTCLARRPKCEECSITHFCRYFEKNQGKLTAEPKKK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaaagagcgatacgaagcctttatcaattacttttcggaaaacatgcccgta
gcagaaacggagcttcaatacgaggatccatttcagcttttggtggcagtagtactatcc
gctcaatgtactgacaagcgtatcaatatggtcactccggccttatttcgggattttcct
actcccgctcatttggctgcatcccattttgatgagcttttcccttatatcaaatccgtt
tcttatcccaataataaaaccaagcacctgttgggtttgggtaaaatgctaatggaagaa
tttggcggaaaagtgcctgaaactgtagcagaactcaccaagcttccaggagtgggaagg
aaaaccgcaaatgtgattacctcagtagtttggaatcaacccaacatggccgtagatacg
cacgtgtttcgcgtatcaagaagactcggcctggttcctcaaactgcaaaaacacctcta
gaggtagaaaaacatttgatccgccatattccgaaagaacatgttcacaaggctcatcat
tggttgattctacatggcagatatacctgtttggccagaagacccaaatgcgaagagtgt
agcatcactcatttttgcaggtattttgaaaaaaaccaaggaaaattaaccgccgaacca
aagaaaaaataa
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