Algoriphagus sp. NBT04N3: GYM62_20170
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Entry
GYM62_20170 CDS
T09623
Symbol
odhB
Name
(GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00020
Citrate cycle (TCA cycle)
algo00310
Lysine degradation
algo00380
Tryptophan metabolism
algo00785
Lipoic acid metabolism
algo01100
Metabolic pathways
algo01110
Biosynthesis of secondary metabolites
algo01120
Microbial metabolism in diverse environments
algo01200
Carbon metabolism
algo01210
2-Oxocarboxylic acid metabolism
Module
algo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
algo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GYM62_20170 (odhB)
09105 Amino acid metabolism
00310 Lysine degradation
GYM62_20170 (odhB)
00380 Tryptophan metabolism
GYM62_20170 (odhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GYM62_20170 (odhB)
Enzymes [BR:
algo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
GYM62_20170 (odhB)
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
GCV_H
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QYH41004
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Position
4647221..4648771
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AA seq
516 aa
AA seq
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MSKEIKVPAVGESITEVTIGQWFKKDGDSVQMDEVLCELESDKATFELPAEAAGTLRIKA
EEGDTLEIGAVICVIEESDSGVKSEESKDSKKSEEKSKSSSSSSSKTGEVKEMVVPTVGE
SITEVTLANWIKADGDYVKLDDIIAEVDSDKATFELPAEASGILRHVAKEGDTLEIGGLI
CKIEVTEGEPETSSSEKSSSESASTSSSSSDKDSYASGHASPAASKILSEKGIKPEEVKG
TGKDGRITKEDAQNAQKSAPAPKSESKSESKAEAPAQKPTQGGSREERREKMSSLRRTVS
RRLVSVKNETAMLTTFNEVNMKPIMDLRSKFKEQFKEKHGVGLGFMSFFTKAVCVALQEW
PAVNAKIDGNEIVYNDYCDISIAVSAPKGLVVPVIRNAEGLSFDQIEKEVVRLATKARDN
KLSIEEMTGGTFTITNGGVFGSMMSTPIINAPQSAILGMHNIVERPMAVNGEVKILPMMY
VALSYDHRIIDGRESVSFLVRVKQLLEDPTRLLFGV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaatcaaagttccggctgtcggtgaatcaatcaccgaagtaaccataggc
cagtggtttaaaaaagatggggattcagttcagatggatgaagttctatgtgagcttgaa
tctgataaagcaacttttgaattgccggcagaggctgcaggtaccttacgaatcaaagca
gaggaaggtgatacattggaaattggcgctgtgatctgtgtaatagaagaatcagattca
ggagtcaaaagtgaagagtcaaaagactccaaaaagtctgaggaaaagtctaaatcatct
tcttcctcctcttctaaaacaggggaagtaaaggaaatggttgtgccaactgttggtgaa
tctatcactgaggttacgctggcaaattggatcaaagccgatggcgattatgtcaaatta
gacgatatcattgctgaagtggattcagataaagcaaccttcgaattacctgctgaagct
tctggaatacttcgacatgtggcaaaagagggtgatacacttgaaatcggaggattgatc
tgtaagattgaagtaactgaaggagagcctgaaacttcatcttctgaaaagtccagctcc
gaaagtgcctcaacctcatcttcttcatctgataaggacagctacgcatcaggtcatgct
tctccggcagcgtctaagattctttctgaaaaaggaattaagccagaggaggtaaaagga
actggaaaagacggaagaattacaaaagaggatgcacaaaatgctcaaaaatctgcgcca
gctcctaagtcagaatccaagtcggaaagcaaggcagaagctcctgctcaaaaaccaact
cagggtggttccagagaagagagaagagaaaaaatgtcctcattgcgacgcactgtttct
agaagattggtgtctgtgaaaaatgaaacagccatgttgacgacattcaatgaagtcaat
atgaagccaattatggatttgagatccaaattcaaggagcagtttaaagaaaagcatggt
gtaggacttggtttcatgtcattcttcaccaaagctgtttgtgttgctcttcaagaatgg
ccagctgtcaatgccaaaattgatgggaatgagattgtatataatgattactgtgatatt
tcaattgctgtttccgctccaaaaggtctggtcgtgccagtaattagaaacgctgaagga
cttagcttcgatcagattgaaaaagaagtggtaagattggctaccaaagcaagagataat
aagctttccattgaagagatgactggaggtaccttcaccatcactaatggaggtgtattt
ggctccatgatgtctactccgatcattaatgctcctcaatctgctattctcggtatgcat
aatattgtggaaagaccgatggctgttaacggtgaagtgaaaattcttcctatgatgtat
gtagcactttcttacgatcatagaatcattgacggaagagagtctgtaagcttcttggtt
cgcgtgaagcaactcttggaagatccaactaggttgttgtttggagtataa
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