KEGG   Austrofundulus limnaeus (annual killifish): 106513351
Entry
106513351         CDS       T06063                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106513351 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alim03041]
    106513351 (smndc1)
Spliceosome [BR:alim03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106513351 (smndc1)
 Complex B
    106513351 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    106513351 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 Phage_GPO
Other DBs
NCBI-GeneID: 106513351
NCBI-ProteinID: XP_013857600
UniProt: A0A2I4AQ39
LinkDB
Position
Unknown
AA seq 238 aa
MSDDLAKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLITSQPVDGASA
ASSSDTVPVKRHWKIGEKCLAMWSKDGQVYEAEIEEIDRENGTAAVTFTGYGNAEVIPLQ
NLKVVEEGKRSEDDGGMKPKSKKEQIAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQ
FNNKAYSKNKKGQVKRSIFXSPESVNGKXGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggatgatctggcgaaacaattgagcagctacaaagcccagctgcagcaagtagaa
gttgcattatctaccgatccggacaacgaagaccttctcaaactccagaaggacttgcag
gaagtcatcgacctgacaaaagatttaataacttcacagcctgtcgacggggcgtctgcg
gctagtagttcagacacagtgcctgtgaagcgccactggaaaattggagaaaagtgtttg
gctatgtggagtaaggatggacaggtgtatgaggccgagattgaggagatagaccgggag
aatggcacggcagctgttaccttcactggatacgggaatgccgaagtgattcctctgcag
aacctcaaagtggtggaggaagggaaacgatccgaagatgatggaggcatgaagccaaaa
tcgaagaaagagcagatagcagagcagcgagagtataagaagaagaaagctcagaaaaag
gtccagaggatgaaggagttggagcaggagagggaggaccaaaagtcgaagtggcaacag
ttcaacaacaaagcctattcaaagaacaagaaaggacaggtaaaaaggagcatatttgya
tctccagaaagtgtaaacggaaagrtgggagttggaacttgtggtatcgcagacaaacct
atgacccagtacaatgacacgtccaaatacaacgtcagacatttaatgccacaatga

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