Austrofundulus limnaeus (annual killifish): 106514451
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Entry
106514451 CDS
T06063
Name
(RefSeq) uncharacterized protein C5orf42 homolog isoform X1
KO
K22859
protein JBTS17
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
alim03037
]
106514451
Cilium and associated proteins [BR:
alim03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
106514451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
106514451
NCBI-ProteinID:
XP_013859179
UniProt:
A0A2I4AUL5
LinkDB
All DBs
Position
Unknown
AA seq
2372 aa
AA seq
DB search
MVSVIMSQIQAALQSTGQSLEEGPSLLSSSGERLFLCGLYPKSADAWRLQICEEASKSGE
RCVFLEKRLCLALLYSLLSQYHLKDAQEFGDHMAQLILLQAGKQIDCLASITDSPPCPWL
PMNLHSGAASAVVQTLGRFMASYFSNQPLFILPAHNVAVLPPIHLPHSPSVGRLVPLCQE
DVAKAVRQQHLSEVWTVDYALDLLLLGGLLPEAVWLAYHLGDWKTAVTLSLAHISYCTER
SDFTQLRRRELQLPSVLQPESIFQAELWGLLGNKTDSQESADKDEDKSLTICSDPLEGED
WDLLGASVQEILKASVMAEVNVLCSPLSSFLEKAKRTSSSLPALVPIGLYLPSPPLYCPQ
PSPNTQDHMETVGEFAEVSCRHKVSAVLQRLLFLLRSARCCHPAAQWYISHLRRARHILH
KIKKKYCYPSADQEEKDFPEALMKLITRGGYFRLGPNKDGRLDSDIIHTIICFRELCALC
WMLHIRDQLSLHCRRYQAARQRGGDEEPSNESEVNSSGVDALLWTVRFLPFSHFLSAEEV
LQDILLSLLSELPPVPLVADTLVRAFPQEEESVRVSLREKYNLLLQRLRQCNVIDAEKKE
VNESMVTLIRDKSKHRRKHLARLQRHLAPPVLHLWEKEEDEADKQSKYDTSTTGQLSLGT
SLSTSTLTDGGLQPLCSDVDTAASISVAVSPEQHLRATTRSRGAKKEGKDAKKFEKLFKE
KCDKTEDGEKGQPSLPAIGSWEFELEDDEYLNFLELFLSYLLEKNNTDGEDFGSELPLLR
SFCSELRERELHSLKFDVLSTIHRRQNGERRPARKHPSNAPPVFRAGSCFKPVKQGEKPE
LQTSSVWNEATTSRASLSVSSHPGQRTGKQKGLFGRQRRDSSPARVKEAVPGCETNAFST
GQPSQSFVFSSSVSLEAVTDLQQGLDPKLEAQFPELGRLLEWMVRWADRRALLGHRGKKK
NAKEGEADEGVVIRVKASSSAILTALSLLECKHTVLPQTERFSSHIPVQEMQFIVAPVLQ
PEVDQRLERDSSVDTGYPGSVNTPITGLDHNLQHGELSSHTDGSEEAAFQRMPLSSNRLQ
LNLDPEQECASSQQQSFVNVPPEKKDRRGDSESLTTLSSGSNEDTSRNVCSPEMSFKLED
LDYSERAKEMSSSSSKCSPELPEAPPAAQPKTTLGAELTNSSRVHLPNPAVDPPNRQHQS
SRVGAPAAESASFNQPSITSPIRQRLGEDLLRLVQHINYMSLSEVIGATFSNLQQAQQSF
PVAPPGLSSSQPNIPTPSFTKIIPEPNIPPVQTIAAAPLTQEFVPKSGSRDSRFNSVSSC
EFADQPIVQSSAKISSGSNQNLLCNASGAGVSYQEMQPLSVQAESPEIKQRKKIPSSQGL
LATADTCSAVHNPPVSAPASIRAQNDSPQVLGLKLLRLHPSMMLHDDAPHGPQTLRTANP
ETIESYPSKDKHKEDRATWKKKGGEQRNVFSAPVKHLSNNPPRNPTPRTPQPQMWPSERP
VAQAALPHPAFPTLTPASISGLRLLQVQHVPQSNITLPKLSLPFVSRPAVFSVPVTGAPM
IKLLSIDSGPKMMLPRAVPPTQTLRLTSMEELSRLEIRRRDAEDAQLQLLRADLSTKDCR
RPASPTSCTPSKRQKRREKSRKTEVTFRLNDSVVPTLKAEDSPASKEPVFAEGIAPTQDV
TGPSDCLLTGQRLLGRVFSTSAELHAFASTSKRPPERHDAFTNTDSASLPVLVDKAVSVH
ASVTTSSSKPQSPRTFHVFCEDSIQNTEKTPQKPEEMQRQGGHQFISVLDLEELIPHEDL
LQRRSSEIQVIPSEPQPCVAVQENTTKPTNSTDIPVTSPSFSYAGPSGVLERIVRQDHVT
VASSDSELCGAIKGQSTDGTPSPPPAVQFSSRLSELDAQLAALQNIADNLEMDFLHSRTL
VNKIEKLSSDMTPGVKMNASVKKTVRISDPMNAWTPRFDSDQKARETPEEERVHNDSISP
ETNPSLYDFTSHSSQHAVPSYLHTPPGVKHHFSETYRIPHAWEDKNLSQTELSDTADILD
ELVREGYLSSTDWSLSASQTAHHSSRQSRWTSQKPTLPEDERKELRIWMRRKQRERLAAY
QKHRENLREREHKPFSSRPTGSENRNRATTGRNREEEEKLMLLKQYEQRTREACSLAADF
LGSPENVQRSSQTDAPPVVSSTRLISAPPPSSARRPHAVSVSDKRRRGSQSGQAPRPQSM
EGRQLEDVRRRLGLHRPVTYLPGDRLSRVTRRGMLSNTKSQTQHPAASQSEGQRGGHQKL
GLNNTFSRGAASERWIPREKTQVEKTERVNRSESNRLQGLEEFDFVLGEQEEPLTGGASE
MDWLDNLSESAGSSLSKVDWAAIERMVAEEDD
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtcatcatgtcccagatccaggcagctctgcagtctacaggacaaagccta
gaggagggcccttctttgctgagttcctcaggtgaacgtcttttcctgtgtggtttgtac
ccgaaaagtgcagatgcatggcgtttgcaaatctgtgaagaggctagtaaaagtggtgaa
cgttgtgtctttctggagaagagactttgtctggcacttctttatagtctgctatcccag
taccatttaaaggatgcccaagagtttggggaccacatggcacagctcattctgcttcag
gctggaaagcagattgattgtctggcttccataacagattctcctccttgcccctggctg
ccaatgaatcttcatagcggtgcagccagtgcagttgttcagacacttgggagattcatg
gcctcttatttctccaaccagccgctctttattctgcctgctcataatgtggccgtcctg
cctccgatccatctaccccactccccgagtgttggccgtttggtgccactgtgccaagag
gatgtggctaaggcagttcgacaacagcatctatcagaagtttggacagtggactacgct
ctggacttgcttctgctgggggggctgcttcctgaggctgtgtggctggcttatcatctg
ggggactggaagacagctgtcactctgagtctggcccatataagttactgcactgaacgc
tctgacttcactcagctcaggaggagagagctccagttgccatcagttttacaaccagaa
agcatttttcaggctgagctgtgggggcttcttggcaacaaaacggactcccaagagtct
gctgataaagatgaagacaagagtttaacaatttgttcagatcctttggaaggagaggac
tgggacttgctaggggcttctgtgcaggagatcctgaaagcttctgtcatggcagaagtg
aatgttttgtgctcgcctttgtcttctttcctggaaaaagccaaaagaacgagttcttcc
ctgcctgccttggtgcctattggactttacctaccgtctccgcctctttactgccctcag
ccttctcccaacactcaggatcacatggagactgtgggggaatttgctgaagtttcgtgt
cgacacaaagtgtccgcggtcctccaaaggttactcttccttctgagatctgctcgttgt
tgccatccagcagctcagtggtacatcagccatctgcgccgtgccagacatatcctgcac
aagatcaagaagaagtattgctatccatcagctgatcaggaggaaaaggatttcccagaa
gcactgatgaagctgatcacccggggaggatactttagattagggcctaataaagatggt
cgcctggactccgacatcatccacactattatttgtttcagggagctgtgtgctttgtgc
tggatgcttcacatcagggatcagctctccctccactgcaggaggtaccaagctgccaga
cagcgtggaggagatgaagagccctctaatgagtcggaagtgaattcctccggtgtcgat
gctctcctctggactgttcgttttctgcctttctctcacttcctcagtgctgaggaagtc
ctgcaggacatattgctcagcctgttgtctgaactacctcctgtgcctttggtggcagac
accctggtgcgggccttcccacaggaggaggagtctgtcagagtgtctttgagagagaaa
tacaacttactgctgcaaagactgaggcagtgcaatgtcattgatgcagagaaaaaagag
gtgaatgagtccatggtgactctgatccgagacaaaagcaaacacaggaggaaacatttg
gcacgtttgcagaggcacctagcccctcctgtgctccacctgtgggagaaagaagaggac
gaagcagacaagcagagcaaatatgacacgtccacgacggggcagctgtcactgggtaca
agcctgagcaccagcaccctaactgatggtgggcttcagccactgtgcagtgatgtagac
acagcagcaagcatatctgtggctgtttctcctgagcagcatctcagagccacaaccagg
agcagaggagcaaaaaaagaaggaaaagacgctaagaagtttgaaaaactctttaaagag
aagtgtgacaaaactgaagacggggagaaaggtcagccttccctgccagcgattggctca
tgggagtttgagctggaggatgacgagtatctgaatttcctggagctcttcctcagctat
ttgctggagaagaataacacggatggagaggattttggcagcgagctgcctttgctgagg
agcttctgctccgagctgagggagagagagctgcattctttgaaattcgatgtactttct
acaattcatcgtcgtcaaaacggagagcgtcgcccagcgaggaaacacccgagcaatgcg
ccaccggtgttcagagctggcagttgttttaaacctgtgaaacagggtgaaaaacctgag
ctgcaaacttcttctgtttggaatgaagccaccacatccagggccagcctttctgtcagc
tctcatcctggacagagaactgggaaacagaaaggcttgtttggccgacagcgaagagac
tcatctccagcaagagttaaagaagcagttcctggttgtgaaaccaacgcttttagcaca
gggcagccctctcagagctttgtcttcagctcctctgtgtctcttgaagctgtgactgac
ttacagcagggcctggaccctaaattagaggctcagtttccagagctgggcaggctgctg
gagtggatggtgagatgggccgatagaagagcgctgttgggacatcgtggtaaaaagaag
aatgctaaagagggagaagctgatgaaggagttgtgattcgtgtcaaagcttcatcatct
gccatcctcactgcgctcagtttgctggaatgcaagcacaccgttttaccccagactgaa
cgcttcagttctcacatcccagttcaagaaatgcaattcattgttgcccctgtgctgcag
cctgaggtggatcagaggctggagagggatagtagcgtggacacaggctaccctggatca
gttaacactcccatcactggtctcgatcataatctgcagcatggagaactttcttctcat
acggatggctcagaggaggcagcatttcagaggatgcctctctcatcgaaccggcttcag
ctgaatttagatcctgagcaggaatgtgccagctcacaacagcagtcttttgtaaatgtt
ccacctgaaaaaaaagatagaaggggcgacagtgagagtttgaccacgttgtcttctggt
tccaacgaggacacttctagaaatgtctgctcacctgaaatgagtttcaaacttgaagat
cttgactactctgaaagagctaaagaaatgtcaagttcatcctctaaatgttctcctgag
ctcccagaagctcctcctgccgctcagcctaaaactactcttggtgcagaacttactaat
tcaagtagagtgcatctccccaacccagctgtagatcctccaaaccgccagcatcaaagc
tccagagttggtgcacctgctgcagaatcagcttccttcaatcaaccatcaatcacttca
ccaataaggcagcgcctgggtgaagacttactccgactggttcagcacatcaactatatg
agtcttagtgaggttataggagctactttttccaaccttcaacaagcccagcagagcttc
cctgtggctccacctggactgagctcatcacaacctaatattccaacaccatcctttacc
aaaatcatcccagagcccaacatcccacctgttcaaaccattgctgctgcacctctaaca
caggaatttgtgccaaaatcaggatccagggactcccgctttaactcggtctcatcatgt
gagtttgcagatcagcctattgtgcagagctcagccaaaatctcctcagggtccaaccaa
aatctgctctgcaatgccagtggtgcaggtgtgagttatcaggagatgcagccactttct
gtccaagcagagtcaccggagattaaacagaggaagaagattccctcttcacaggggctc
ctggccactgctgacacctgttctgctgttcacaaccctcctgtgtcggcgcctgctagt
atcagagcacagaatgactctcctcaggtgctgggcctgaagttactcagactacatccc
tctatgatgcttcatgacgacgctccacacggtccacagactctgcgcactgcaaaccct
gaaactattgagtcctatccttccaaggataaacacaaggaggatcgagccacttggaag
aagaaaggtggagagcaaagaaatgtgttttcagctccagtgaaacatctcagtaataat
cctccacgtaatccaactcccaggacccctcagccccagatgtggccatcagagaggccc
gtcgctcaagccgctttacctcatcctgcttttccaactttaacaccagcgtcgatatcg
ggccttcgcctgctgcaggtgcagcacgttccccaaagcaacatcacacttcctaaactc
tcgctaccctttgtctccagacctgctgtcttttcagtcccagtgactggcgcgccaatg
attaagcttctgagcattgattctggacctaaaatgatgttgccccgtgcggttcctcca
actcaaacacttcgtctaacctccatggaagagttgagtcgtttagagatccggcggcga
gatgctgaagacgctcagctgcagctgctcagagctgatctgtccaccaaagactgtaga
aggccagctagtcctaccagctgtacccccagcaagaggcagaagaggagagagaagagc
agaaaaacagaagtcacattccgtctaaatgactctgtcgtcccgacactaaaggcagag
gattcacctgcaagtaaagaacctgtgtttgctgaagggatcgctcctacacaagacgtg
acgggaccctcagactgtttgctgaccggtcagagattattgggcagggtcttttccact
tcagctgaactccatgcctttgcttctacaagtaaacgaccccctgagcgccatgatgct
tttaccaacacagactcagcctctttgcctgtgctcgtggataaagctgtttctgtccac
gcctcggtgacaacaagcagctcaaaaccacaaagtcccaggacttttcatgtgttctgt
gaagattctattcaaaacacagagaaaaccccacagaaaccagaggagatgcagcgtcag
ggtggccatcagttcattagtgtcttagatctagaggaactaatcccgcatgaagatctg
ttgcaacgtcgcagctcagaaatacaagttattccttctgagccacaaccctgcgttgca
gttcaagagaatacgacaaaacccaccaactccacagatatccctgtgacgtctccgtcg
ttcagttatgccgggcccagtggagttttggagagaatcgtccggcaggaccatgtgacg
gtagcttcatctgattctgaactctgtggagccataaagggccagagcaccgatggaacc
ccctccccacctcctgcagtccagttctcctctcgcctgtcagagctggatgcccagtta
gctgctctgcaaaacattgcagataatcttgagatggacttcttacactccagaacgctg
gtgaacaaaattgagaagctctcctcagacatgacacctggcgtgaaaatgaacgcatca
gtaaagaaaactgtcagaatctctgacccgatgaatgcatggacaccaagattcgactca
gaccagaaggccagagagacgcctgaagaagagcgtgttcataacgactccatcagtcct
gagacaaatccatctctgtatgattttacatctcattccagccaacacgctgttccttcc
tacctccacactcctccaggagtaaaacatcacttcagtgagacctacaggatacctcat
gcatgggaagataagaatctgagccaaactgagctatctgatacagcagatatcttagat
gagttggtacgggaaggctacttatcctccactgactggagtttgtctgcttcacaaact
gcacaccatagcagcaggcagagccggtggacatcgcagaaacccacgcttcctgaagac
gagaggaaggagctgagaatctggatgaggaggaagcaaagagaacgactggctgcctat
cagaagcacagagaaaacctcagagaaagagagcacaaacctttctcttcccgtccaaca
gggtctgagaacagaaaccgagcaacaactgggagaaacagagaggaagaggaaaagctc
atgctcctgaaacagtacgagcagaggacgcgtgaggcttgttctttagccgccgacttc
ctcggctcgcctgaaaacgtgcagcggtcttcacagactgatgctcctcctgtggtctcc
agcacacggctgatttctgctcctccacccagcagcgctcgcaggcctcacgctgtatct
gtcagtgataagagaagacgtgggtctcagtcaggacaagcccctcgccctcagtccatg
gaggggcgacagctggaggacgtccgcagaagactgggactccatcgaccagtgacctat
ttaccaggagatcgtctgtccagagtaacaaggcgtggtatgctcagcaatactaagagc
caaactcagcatcctgcagccagtcagagtgaggggcagcggggtggacaccagaagttg
ggattaaacaacaccttttcccgcggagccgcttcagaaagatggatcccaagagagaaa
acacaagttgaaaagacagagagagtgaaccgctcagagtcaaacaggctgcagggtctg
gaggagtttgactttgttttaggtgaacaggaagagcccctcacaggtggtgcttcagag
atggactggctggataatctctctgagagtgcgggcagcagcctcagcaaagtcgattgg
gctgccatcgaaaggatggtggctgaagaggatgactga
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integrated database retrieval system
