Austrofundulus limnaeus (annual killifish): 106516803
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Entry
106516803 CDS
T06063
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106516803
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Protocadherins
106516803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
DUF5753
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
106516803
NCBI-ProteinID:
XP_013862798
UniProt:
A0A2I4B4Y1
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MRYSGPRMTKTKGYGDWRRLALWWHQFFLLWSTIDGQTRYSIQEELKQGSVVGNLAKDLG
LGISEIYDRKLNVASVAGKQYFSVDAGKGELLVNDRIDREALCGQSASCVLPLQILIEDP
LQLFRVEVEILDINDNSPTFPSKDIALDIAESTAIGVRFLLESAIDPDVGSNSLKSYSLS
KDECFSVRVKEVAGGRKVPELILSKLLDREKKAVHKLLLTALDGGNPVKSGTAQITIKVL
DNNDNVPVFEKNLYKISVAENTVEGSTIIQTKASDVDDGLNGEIEYSFGAHTSEAVMSLF
AIDPISGTIFLKEKLDFETTSNYELVISAKDKGTPRMEGHCTVHVEVLDVNDNAPEIVIT
SRPKPVREDSPNGTVVALISARDLDSGDNGKVTLKLPEKSIFSLKPSFSQNYALVNNGVL
DRENVSEYNVEITATDSGSPPLSSRKNVLVTITDVNDNAPVFTQPSYNVYLKENGVPGSI
LFSVSASDLDSGENAKISYSILDSKXQDVSVSSYVYMNSENGSIYSMHSFDYEKLKVFQI
QVQAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTK
VTAVDADSGHNAWISYRVSEATDASLFTVNQYTGEVRTKRAVSEQDESSQRLLIEIKDDG
EPPQSATVTVSILLEDGLHEPILELRHKASEPSRQKTGRITLYLILSLASVSVLSLLTFL
ILAVKCIRNSRSSGTCCMRRSDCEDYKKPNRNLQIQLNTDGPIKYVEVLGGDVMSQSQSF
RSCMSPMSEYSDFTLIKPSSTTDFKEVVSVLDASLPDSTWTFESQQQKPPNNDWRFTQGQ
RPGPSGPHMPYGTQIRWTTKNGTRATGGPEVAMGTGPWPQPPTEAEQLQALMAAANVSEA
TATLGPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQQQAMAQQATQQA
LPPPQSSAQAEPPKAAQTPASKKKSTKKEKK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatagcggaccaaggatgacaaagacaaaaggatacggagactggagacggctc
gcgctctggtggcatcagttctttctcctgtggagtacaatagacggacagactcgttac
agcatacaggaggagctgaaacagggttcggtggtaggaaatcttgcaaaagatctgggt
ttggggatttcagaaatatatgaccgtaaactgaacgtggcttctgtagctgggaagcag
tatttcagcgtggatgcggggaagggcgagctgctggtgaatgacaggatagacagagag
gctttatgtggacaaagcgccagctgcgttctgcctctgcagatcctcattgaagatccc
ttacagctttttcgtgttgaagtggaaattttagatattaatgataattcacccacgttc
ccatcaaaagacattgcattagacatcgcagaatccacagcaattggagttcgatttcta
cttgaaagcgccatagacccggatgttggcagtaattcactgaagtcgtacagtctcagt
aaagacgaatgtttcagtgtaagagttaaagaggttgcaggaggaagaaaagtccctgaa
ttgatattatcaaaattattagacagagagaaaaaggctgtccacaagcttcttttgaca
gctctggatggaggaaacccagtaaagtctgggacggcgcaaataactatwaaagttctt
gataacaatgataacgtccctgtttttgaaaaaaacttgtataaaatctctgtagccgaa
aacactgtggaaggatcaactataatccagacaaaagcrtcggatgtagatgatggtctg
aacggggagattgaatactcgtttggagcgcacacctcagargcggttatgtctcttttt
gccatcgatccaatatcaggaacaatatttcttaaagaaaaattagattttgaaacaacc
tccaattatgaattagtaataagcgcgaaagataaaggcactccaagaatggaggggcac
tgtactgtgcacgtggaagttttagatgtgaacgataatgcgccggaaatagtaatcact
tctcgtccaaagccagtaagagaagattcaccaaatggcacagtagtagctttaattagt
gccagagatctagattcgggtgataatggaaaagtgaccttaaagctccctgaaaaatcg
attttttcattaaaaccatcattttctcagaattacgcactggttaataatggtgtgtta
gaccgtgagaatgtgtctgaatataatgttgaaataacagcaaccgattcaggctcccca
cctctgtccagcagaaaaaacgttttagtaactatcactgatgtgaatgacaatgctcct
gtattcactcagccctcctataatgtgtatctgaaagagaacggggtaccagggtctatt
ctgttctcagtttcagcctctgatctggattctggtgaaaaygcaaagatctcttactct
attctggactctaaarttcaggacgtttctgtctcatcttatgtttacatgaactcagag
aacggcagcatctacagcatgcactcgtttgactatgagaagctgaaggtgtttcagatc
caggtccaggcaaaggaccagggctctccgagtctcagcagcaacgccactgtccatgtt
tttatcctggaccagaacgataacgcccccgcggttatttacccgtcctccgccgccctg
ggctccctctctcatcagaggatgccccgctccgctaaagcgggtcacctggttaccaag
gtgacggccgtggacgctgactcgggccataacgcctggatctcctacagagtgtcggag
gccacagacgcctctctgttcactgtcaatcagtacacaggggaggtgaggactaaacgc
gctgtgtccgagcaggacgagtcctctcagaggctgctcatagagatcaaggacgacgga
gaaccgcctcagtccgccaccgtcacggtgtccatcctgctggaggacggactccacgag
cccatcttagagctgcggcacaaagcgtccgagcccagcaggcagaaaactggcagaatc
accctttatctgatcctgtctctggcctcggtgtccgtgctgtctctgctgactttcctc
atcttagcggttaaatgcatcaggaacagcagaagcagcgggacctgctgcatgagacgg
agcgactgtgaggattacaagaagcccaacaggaacctgcagatccagctcaacactgat
ggacccatcaagtacgtggaggtcctgggaggagacgtcatgtctcagagccagtccttc
aggtcctgcatgtcccccatgtcagagtacagtgacttcactctcattaaacccagcagc
accacagactttaaagaagtcgtcagtgttctggatgcgtccttacctgacagcacctgg
acctttgagagccagcagcaaaaaccacccaacaatgactggcgattcacgcagggacag
agacctggaccgagcggtccccacatgccatacggtacacaaatacgatggacaacgaag
aatgggacaagggcgactggaggacctgaggttgcgatgggaactggcccctggccccag
ccccccacggaagccgagcagctccaggcgctgatggctgcagcgaacgtaagcgaggcc
acggccaccctcgggcccggcaccatgggtctgagcacccgctacagcccccagttcacc
ctgcagcacgtgcccgactaccgccagaacgtctacatcccgggcagcacggccaccctc
acctccaacccgcagcagcagcagcagcaggccatggcccagcaggccacgcagcaggcg
ctgcccccaccgcagtcctcggcccaggccgagccccccaaggcggcccagaccccggcc
tccaagaagaagtccaccaagaaggagaagaagtaa
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