Austrofundulus limnaeus (annual killifish): 106517444
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Entry
106517444 CDS
T06063
Name
(RefSeq) interferon regulatory factor 3-like
KO
K05411
interferon regulatory factor 3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04620
Toll-like receptor signaling pathway
alim04621
NOD-like receptor signaling pathway
alim04622
RIG-I-like receptor signaling pathway
alim04623
Cytosolic DNA-sensing pathway
alim05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106517444
04621 NOD-like receptor signaling pathway
106517444
04622 RIG-I-like receptor signaling pathway
106517444
04623 Cytosolic DNA-sensing pathway
106517444
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106517444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106517444
04131 Membrane trafficking [BR:
alim04131
]
106517444
Transcription factors [BR:
alim03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
106517444
Membrane trafficking [BR:
alim04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
106517444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
106517444
NCBI-ProteinID:
XP_013863753
UniProt:
A0A2I4B7P1
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MAHQKPLLIPWLRDQIDSGRYPGVQWTNPEQTEFSVPWKHALRQDSSSTDVLIFKAWAQV
SGSQPHGDPSIWKRNFRSALRVKGFELVSDSKNDAANPHKVFRWPKGSVSGAVSAAGFQK
LDDASFVENFDAQNFHVPFLEEDIFIPQGIVILEYPAGHDNLQECLNNLNIGPGAEGTAG
FEFPSEQQQLQDQFVIGGHPLPGQQRDPVTFEGAAGETGLPEQPVCPMEGAEGGGYQDGQ
YAAQFLQTVNETREGDSFKTHFRITVYYRGVKVSEQLVENEAGFRLVYRPELNHPVMDPG
TGLSLVSLPQPKDILDQTQSRLTERILEMLGNGLELRVSGYVVYGQRCGETKAFWSLSKF
DGSRRPREISKLQPEPLFLLRDFIKGIIDFSNGGECPPCSLFFCLGEKWPDPENRPLEKK
LLSVEVTLTAAESLKNIAVEGGASSLQSVELQVSLEEMMEQC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcaaaaaccactgttgattccatggctgcgggatcagattgacagcggcagg
tatccaggtgtccagtggacgaacccagagcagacagagttctctgttccgtggaaacat
gctctgagacaggactcctccagtacggatgttctcatctttaaggcctgggctcaggtg
agcggcagccagcctcacggagacccctcgatctggaagagaaacttccgcagcgccctc
cgagttaaaggcttcgaattggtgtcagattccaagaacgacgccgctaaccctcataaa
gtctttcgctggccgaaggggtcggtatcaggagctgtctctgctgctggattccagaag
ctggatgatgccagttttgttgagaactttgatgcacaaaattttcatgtgcccttcctc
gargaagacatcttcattccacaaggcattgtgattctagagtacccagctggtcatgat
aatctccaggagtgtctaaataacttgaacatcggtcctggagcagagggcacggcaggc
ttcgagttcccgtctgagcagcaacagctgcaggatcagtttgtgattggtggacacccg
ttgcctgggcaacagcgggatccagtaacgtttgagggtgcagccggtgaaactgggttg
cctgagcaaccagtgtgtccaatggagggagctgagggagggggctaccaagacgggcag
tacgcggcacagttcctccaaacagtgaacgagaccagagagggagatagtttcaagact
catttcaggataacggtgtactacaggggggtaaaggtctctgagcagctggttgagaat
gaagctggattccgactggtctacaggcctgaactcaaccatccagttatggatcctggg
acgggcctttccctggtctctctgccacaacctaaagacattctggatcaaacccaatct
aggctgaccgaaaggattctggaaatgctgggcaacgggctggagctgcgggtctcaggt
tacgtggtgtacggccagcggtgcggcgaaaccaaagccttctggagcctctctaagttt
gatggcagcagacggccgagagagatttctaaactgcagccagaaccacttttcctgctc
agggactttatcaaagggattattgatttcagtaacggaggtgagtgtcctccctgctcc
ctgttcttctgtctcggggagaagtggcctgacccagagaacagaccgctggagaagaaa
ctcctctcagttgaggtgaccttaacagcagcagagtcactgaagaacatagctgttgaa
ggtggcgcctcctctctgcagtctgtggaactgcaggtgtcacttgaagaaatgatggag
cagtgttga
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integrated database retrieval system
