Austrofundulus limnaeus (annual killifish): 106517445
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Entry
106517445 CDS
T06063
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106517445
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106517445
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
106517445
NCBI-ProteinID:
XP_013863754
UniProt:
A0A2I4B7P5
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MGEKMPSELDPTSKDQSWIPKVFKKRVCTTFVEDSFSNGALCQCGNARDAHTSVALGDFF
STAMVNHWDSAQHSSEYPTDAFGEVQFAGASKRHSYFLRLSGNTSPSLVYTMMTTHWHLP
APNLVVSVVGGENXAKVKTWVREVLRQGLVKASQRAGAAWILTAGLREGVGRCVGEAVRD
HAAAASSDSKNRVVSLGVASWGLVHNRHQLVDPKGSFPAKYYVQNPTRDSSCLDNNYQAF
LLVDDGSVGRRGGETAFRAKLEHYISHQRTGIWGSGNIDIPVLCMLISGETSMLERVDNS
LKKSMPWLVLAGSGGVADFLSDLLENLSSAPVFQSSEGDGEAGPRVDLKEKVTERVKKYF
SDEPVTDKLVEQALSIYQNKDLITIYHGEQESPTDFDIVLLKALVGASKHRASTADCPYN
EELKLAVAWNRVDIAKSELFNGDIQWTYEDLEESMTDVLINDKPQFVRLFTENGLNILDY
LTYGRLEQLYGSVAEGTQLYHLLQRCLVMRVGTTPLLTAPPPDYLPESQSKLLTENPPSE
PGSEVTLFEISGVLEILLGDVCQRFYYDVFDLQDVSSRRITXRSVSKRLNGDCPYRARRC
LSPWASLFIWAVLQNRSEMATFFWEMAGESVLSALSGCKILRELSRLEAETETKLSMKEL
AQKFENLALDIFSSCYRSDESRSFKLLIRKSPVWGGTTCLQMGMSADARHFFSHDGVQSL
LSQIWWGDMERTTEVWKLLLTFFCPVLCYTNFISFREQYDQQQEEEEKPNEDRPTDTHYG
TTVFSFSDIKHIESDSDEVTTPQTATISGLPEPYRPPQRPFIISHWRRFWFAPVTAFLGN
ILMYFLFLVLFAYVLLMDFKPPPPSGPASSEYVLYFWVFTIVCEEIRETFFIGTMTWRQR
FRVYIQDVWNKFDLIAIALFLIGSTSRMFSWSYEFGRDVLCVDYMVFTLRLLHIVAIHKQ
LGPKIIIVGKMVKDVFFFLFFLGVWLMAYGIANQALLYSYDPNFGRIFRRVFYRPYLHIY
GQIPVEEVDVGKVWDVTCTDDTTLIEGGAEPCRSTHNNWLVAILLVIYLLVTNILLINLL
IAMFSYTFTEVQANSDIYWKFQRYNLIVQYHSKPSLAPPFIILSHINLFIKRVIRKVPSV
KIHHFVLQLKGKAANRLMTWESIQKEDFLTAQNKIQKSSDSEKLKRMSDKLNGVMKQLSE
IKEFEHRLKSLENEMEYSSDALRWIVETLAQSSTLKNPRPPPVSRDAVSTSSSSY
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaaaatgccgagcgaactagatccaacgtccaaggaccagagttggatccca
aaggtcttcaaaaaacgagtgtgcaccacctttgtggaggattctttcagtaatggagct
ctgtgtcagtgtggaaatgcgagagatgcccacacgtctgtggctctcggggactttttc
agcacagccatggtgaaccactgggacagcgcccagcattcatctgaatacccgactgat
gcctttggagaggtgcagtttgcaggagccagcaagagacacagctatttcctgcgtctg
tcagggaacacctcaccgtctctggtctacaccatgatgacgacccactggcatcttcct
gcacccaacctggtggtttctgttgtgggaggagaaaacrgggcaaaggtgaagacctgg
gtkcgggaggttctcaggcagggacttgtgaaagcttcacaaagagcaggagcagcatgg
atcctgactgcaggactgcgggaaggtgttgggaggtgtgttggtgaggcagtgagagat
catgctgctgcagcttcttcagactccaaaaacagagtggtgtcactgggtgttgcttca
tggggtctggtgcacaaccgacatcaactcgtcgaccctaagggcagttttcctgctaaa
tattacgtgcagaacccaactcgggattcttcctgcctggacaacaactaccaggccttc
ctgctggtggatgatgggagtgtgggccgccgaggaggggagaccgccttcagagccaaa
ctggagcactacatctcccatcagcgcacaggaatatggggcagtggcaacattgacatt
cctgtcctttgcatgctgatatcaggggagacgagcatgctggagagagtggataattct
ctgaaaaagtccatgccctggttggtgttggctggctcaggaggcgtcgctgacttcctg
agtgacctgttggagaatttgtcttcagccccagtgttccagtctagtgagggtgatggc
gaggctggtcccagggtggatctgaaagaaaaagtgacagaacgagtgaagaaatatttt
tctgatgaaccggttacagataaacttgttgaacaagctctaagcatctaccaaaacaaa
gacttgattacaatctatcatggagagcaggagagcccaactgactttgatatagtactg
ctcaaagcattggtaggagcaagtaagcatcgtgcctcaactgcagactgcccttacaat
gaagagctcaagctagctgttgcttggaacagggtggacattgctaagagcgaactcttc
aatggagacattcaatggacgtatgaggacttggaagaatccatgacggatgtcctgatc
aatgacaagccccagtttgttcgtcttttcactgagaatggcttgaacatcctggactac
ctgacttatggcagactggagcagctctatggctctgtggctgagggcacacagttatac
catctgcttcagcgctgcttagtgatgcgtgttggaactacacctttgcttacagcacct
ccacctgattatttaccagaatcacaatccaaattattaacagagaaccctccaagtgaa
ccaggatctgaggtcaccctttttgagatttcaggtgttttggaaatattattgggggat
gtttgccagcggttctactatgacgtttttgacttacaggatgtctcgtcccgaaggatt
actttwaggtctgtaagtaagcgtctgaatggagactgcccatatcgagcgaggcgatgc
ctctctccctgggcttcacttttcatctgggctgttctacagaaccgcagtgagatggcc
actttcttctgggagatggcaggagagtcagtgctgagcgctctaagtggttgtaagatc
ctgcgagagctgtccagactggaggctgaaactgaaactaaactctccatgaaggaactg
gcccagaagtttgaaaatctggccctggatatcttcagctcttgctatcgcagcgatgaa
agtcgttccttcaagcttttgatcaggaaatctcctgtttggggcggtaccacctgccta
cagatgggcatgagtgctgatgcccgacatttcttcagccatgatggagtacagtctctg
ttgtcccaaatctggtggggtgacatggagaggaccacagaggtgtggaaacttctgctc
accttcttctgccctgtcctttgctacaccaacttcatctccttcagggagcaatacgat
cagcaacaagaggaggaggagaagcctaatgaggacagaccaactgacactcattatggg
acgactgtcttctctttctctgacatcaagcacattgaatctgattcagatgaagttacc
actcctcagactgccaccatcagtggtttacctgaaccctatagaccaccacaacgtccg
ttcataatatcacactggagacggttctggtttgcacctgtcactgcctttttgggaaac
atcctgatgtacttcctgtttctcgtgctttttgcatacgtgctgttgatggacttcaag
cccccaccaccttctggtccggccagctctgagtacgtgctgtacttctgggtgttcacc
attgtgtgtgaggagatcagggagacattctttatagggactatgacctggcgtcaacgg
tttagagtctatattcaggacgtgtggaataaatttgacctcattgccatagcactgttc
ctcataggatcaaccagcaggatgtttagctggtcgtatgaatttgggcgggatgtcctg
tgtgtggactacatggtcttcactcttcgcctccttcacattgttgccattcacaaacag
ctgggacccaagattatcattgttggcaagatggtgaaagatgtcttcttcttcctcttc
ttcctgggagtgtggctcatggcgtacggaatagccaatcaggctttgctttactcctat
gatcctaactttggtcgcattttccgaagagttttctacagaccttacttgcacatctat
ggacagattcctgtggaggaggtcgatgttggtaaggtgtgggatgtaacctgtacagat
gacacaacattgattgagggtggtgcagagccatgcagatctacgcacaataactggctg
gtggccattctgttagttatttatctcctggttacaaacattctactcataaacctgctt
attgcaatgtttagctacaccttcactgaagtgcaggccaacagtgacatctactggaag
tttcagcgctacaacctaattgtccagtatcactccaagccctcactggctcctcctttc
atcatcctctctcacatcaatttatttatcaagagggtcatccgtaaggttccctctgtc
aagatccaccactttgttttgcagttaaagggaaaagcagcaaacagattaatgacgtgg
gaaagtatccagaaagaagacttcctgactgctcaaaacaaaatccagaagagtagtgac
tcggagaaactgaagcggatgtctgacaagctgaatggtgtgatgaaacagttgtctgaa
atcaaagagtttgaacacagactcaaatccctggagaatgagatggagtacagctcagat
gctctcaggtggattgtggaaactttggcacaaagcagcacattgaaaaaccctcgacct
ccacctgtatcaagagatgccgtctccacttcctccagttcatattga
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