Austrofundulus limnaeus (annual killifish): 106518295
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Entry
106518295 CDS
T06063
Name
(RefSeq) plakophilin-2-like isoform X1
KO
K10387
plakophilin 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106518295
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
106518295
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
HEAT
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
106518295
NCBI-ProteinID:
XP_013864972
UniProt:
A0A2I4BB72
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MSGADPLKSAISYENQDDTSLALPSVNQYRSGAQRVKEQLQTIKRTRSKHLSAKSGPIPL
SPTSPFNDAEGSVFFSNGFSRSFSLEKNINNHQLFDNSKRQTRKKSSTFSGYRYESGYGL
SGSVAAGQTNTSRSEPALTLQPKSSVPPQRKSTYVKSRSSSSSQYIKRLNSQSHQKNVSN
GQVKTQYHTGVPXSPVQIKPQPSMTILNGSAQTKSQYHTGVPVSPVQIKPQPSMTILNGS
AQTKSQYHIGIPISPVQIKPQPSMTILNGSAQTKSQYHTGVPVSPVQIKPQPSMTILNGS
AQTKSQYHTGVPISPVQIKPQPSMIISNGSAQIKSQYHTVVPNGLGPVKTSYPAVVPKSP
GQIKARHSMFVSSSGQNKTQYPTGLPKSPGQVRPNSMFFSSTLGQNKTQYGTFTPNGPEQ
IKTHQSMIASNGSGHIKSQYFKSSQSGMMGTNSTTFIDGSTKIKETCGVNETTSSAPITL
KEAVEFLSKDDENYQYCGASYIQHNTFISENAKEEVLKLNGIPPLVNLLRSSSAQVRYTA
SAALRNLSYKSDGNKREIQRCSGIPAAVTQLKCSDSADLNKQLTGLLWNLSSAEYLKSDL
MKEALPVLTEHVLLPXTKQTTKTEKDPEVFFHTTGCIRNLSSAKQDSRKALRKQKHLVDS
LVSYVKECVDKGQDDESLGNCLCILHNLSYKLEAEAPELFYNINALASTKARSQSYNNIS
PVGCFSSPTKPHEYHFXYPVIEEQKASGAGLLIHSTTLQSYLSLLDSNRRDETRETCCKI
MQNLTSXNNAVSNVMSAKIVQKLNGMPCISPLLTSERISLQTSAMALXGNLVKNPNLQTV
ISTRALPDLVTVLNNGTEGANESDDTLAMACQTAGTLLLREPEFNKKYLNQSLIESLQHI
SRNRYFPKSSKAASLILLNMWSEKELQSCLRKNGMIKSMFVNDTTVAAQKLAQGIY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgcggatcccctaaaatccgccatttcctacgaaaaccaggacgacacgtcg
ctggctctgccgtccgtcaaccagtaccggtccggagcgcagcgcgtcaaggaacaactt
caaaccatcaagaggaccaggtccaaacacttaagcgccaaaagcggacccatccccctg
tctccaacaagcccgttcaatgacgctgaaggaagtgtcttcttttccaatggcttctct
agaagtttcagcctcgagaaaaacataaataatcatcaattattcgacaactctaaaaga
caaaccaggaagaaaagttctacattttctggctatcgctacgagagcggctatggcctc
tctggctctgtggcagcgggtcaaaccaacaccagtcggagcgagcctgccctgaccttg
cagccaaaatcgtctgtcccaccacagagaaagagcacctacgtaaagagcagaagtagc
agcagcagtcagtacataaagaggctcaactcacaatcacatcagaagaatgtctcaaat
ggtcaggtcaaaacacagtaccacacaggtgttccartcagtccagtgcagataaaacca
caaccttctatgaccatcttaaatggttcagctcagacaaaatcacagtaccacacaggt
gttcctgtcagtccagtgcagataaaaccacaaccttctatgaccattttaaatggttca
gctcagacaaaatcacagtaccacattggcattccaatcagtccagtacagataaaacca
caaccttctatgaccattttaaatggttcagctcagacaaaatcacagtaccacacaggt
gttcctgtcagtccagtgcagataaaaccacaaccttctatgaccattttaaatggttca
gctcagacaaaatcacagtaccacactggtgttccaatcagtccagtacagataaaacca
caaccttctatgatcatttcaaatggttcagctcagataaaatcacagtaccacacagtt
gttccaaatggcttgggtccggttaaaacatcatatcctgcagtggttccaaaaagtcca
ggacagataaaagcacgtcattctatgttcgtttctagttcaggtcagaacaaaacacag
tatcctacaggattgccaaaaagtccagggcaggtaagaccaaattctatgtttttttca
agtactttaggtcagaacaaaacacaatatggcacctttactccaaacggcccagaacaa
ataaaaacacatcagtctatgatcgcttcaaatggatcaggtcacatcaaatcacagtat
ttcaagagtagtcaaagtggcatgatggggacaaattcaacaactttcatcgatgggtct
accaagatcaaagaaacctgtggggtaaatgaaaccacttcatctgctcctatcacgttg
aaggaagctgtggagtttctttccaaggatgacgagaactaccaatactgtggcgcctcc
tacattcaacacaacactttcattagtgaaaatgcaaaagaggaggtattgaagctaaac
ggcatccctcccctggtgaatttgctgcgtagctccagcgcacaggtcaggtacacggcc
tcggctgccctccgtaacttgtcctataagagcgacggcaacaaaagggagatccagcgc
tgcagcggcatcccggcggctgtcactcagctcaaatgctcagactccgctgatctcaat
aaacaactgacaggacttctgtggaatttatcctctgcggaatacctgaagtcggacctg
atgaaggaagctctgcctgttctaacggagcatgtgctcctgcctyacacaaagcagacc
acaaaaactgaaaaagatcctgaagtcttctttcacactacaggatgtatcagaaacctc
agcagcgcaaagcaagacagcagaaaggcgctgaggaagcagaaacatttggtcgactct
ttagtgagttatgttaaagaatgtgtggacaaaggacaagatgatgagtccttaggtaac
tgcctgtgcatcttgcacaatctgtcctacaaacttgaggccgaggctccagaactgttc
tacaacatcaacgctttggcttcgactaaagccaggagccagagttacaacaacatcagc
cctgtcggctgcttcagctcaccaaccaaacctcatgagtaccacttcsactacccggtc
atcgaggagcagaaagccagcggtgccggcttgctgatccactccacaacgctgcagagc
tacctgtctttgctcgattcgaatcgacgggacgagacgcgggaaacctgctgcaaaatc
atgcagaatttgacttccaawaacaacgctgtctcaaatgtaatgagtgcgaagattgtg
cagaaactgaacggcatgccgtgtatcagccctctcctgacctcagagagaatcagcttg
caaacgagcgccatggctctgrttggaaacttggtgaagaacccaaatctgcaaactgtc
atcagtacgagagctctccctgatctggtgactgtcctgaacaacggcacggaaggagcg
aatgagtccgacgacactttggccatggcgtgccagacagccggcaccctgcttctgaga
gaaccggagttcaacaagaaatatctcaaccagagyctgatcgaatccctccagcacatc
agcaggaacagatatttccccaaatccagcaaagccgcatctcttattctcctgaacatg
tggtcggagaaagagttgcaaagctgtctgagaaagaatgggatgatcaagagcatgttt
gtgaatgacaccaccgtggcagcgcagaagttggcccaagggatttattag
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