Austrofundulus limnaeus (annual killifish): 106519060
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Entry
106519060 CDS
T06063
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106519060 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106519060 (nup210)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106519060 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_13th
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_9th
Ig_NUP210_5th
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_15th
Ig_NUP210_4th
Ig_NUP210_16th
Ig_NUP210_6th
Ig_NUP210_14th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
106519060
NCBI-ProteinID:
XP_013866027
UniProt:
A0A2I4BE60
LinkDB
All DBs
Position
Unknown
AA seq
1880 aa
AA seq
DB search
MLKLFVLLLLTAIEVDGSSKLNIPKVLLPLARTTRINFTLETTEGCYRWTSTRPEVASIQ
PVDEDGARGCSRSAVLQALSTQPSRLTSIILAEDVVTGQVLRCDAIVDIISDIQIVSTTR
ELHLEDSPLALKIHALDSEGNTFSTLAGLVFDWTLVKDVDVNGFTDSYNSLRVLKFSEST
YTPPGYISEMERVGKQGDIILVSGLKTGHAKLKAKIQEPLYKDVGAAEVRLLILENILLS
PAHDVYLLAGTSIRYRVLKIRQGTITELSMPCDQYELHLQNSVVGPNGNPDVAVASLDHS
TSTVTAVQLGHINVVLDHKSLLMQGVSRLPNSTLFVVEPAYLGFKIHPGDSWVLETGRVY
DILIEVFDKSSNKIYLSDNIRIDTVFPVEYFEILQSSPNGSYHHVRALRDGLTLIDATLK
AVQDERGRVHALANPVHNEQDVEIYNPIVLTPSILTFPWQPKVGAYQYTVKATGGSGNFS
WSSSNTAVATVTVKGVMTTVSDIGVTTIYAHDLRNPLHFGQMKVYVVEPVAMDFAPCPVE
ARLGLVLDLPLRIFGPLEELERERVMLSDCSHFDLLVEQENHGVFELLDGRLAPGQNHCS
GVRAKALSPGYTVLTVSYTHGNIHLSAKITIAAYLPLKAVDPVSVAVVTLGSSKDMLFEG
GPRPWVLEPSKFFCTSRAEDESSLSLTLTSPSSHNYNQHWLRATCRALGEQVLEVTVGNK
ASVTNPFPAVEPAVVKFVCAPPSRLTLVPVYTSPQLDLSCPLLKQNKQVVPVSNYRNPIL
DLAAFDQQGRKFDNFSSLSMLWESSRPSLASIESSMPMELQPLEDNNKQMKLHGRQTVLV
HQQTGIAAITVTALGYQVPHLAAAKVPSPYDPLTPVSATLELLLVEDVKVFPDTVTIYNH
PDVQLNLALKEGSGHFFVNTSVKGIVNVLFQEAQSTAQVSPVHPGTVKVMVHDLCLAFPA
PAEATVHVSDILEVYVRVVDKVEIGKSVKAYVRVLDGNKKPFPSNYFQFMNLKLKAASAI
VSLRPLAESTESDTAVFLVKGAVIGQTTLSAVVVDKNGRKIASAPQQIEVFPPFKLIPRK
MTLLIGAMMQITSEGGPQPQSHIIFSISDEDIASVNAMGHVRGAHVGNVTVTGLVQAVDA
ETGKLVIVSQDQVEVEVVFLTAIRIRAPITRMKTGAQMPVYVMGLTNSQTPFSFGSVLPS
LTFYWSTTKRDILDVQPRHSETNVNLQPEHNFAMRVTGRMRGRTGLKVVLRVTDPKAQQL
QGSLQELSDEIQIQVYDKLQVLSPQIQAEELLLAPNSVLKLQTNRDGVGALSYRMLDLPD
QVVVTQVDDKGLLSSGSLTGISSLLITSQETFGVNQTLILTVKVVPVSYIRFSAGPVLHT
QTREGLTAFPLGMLLTFTAHFHASTGEALHSSNSHLTFSTNRDDLVQVGVGPSNHTLTVR
TVNVGLTLLAAWDNENMGVADYVPLPVQHAIYMDESNKLVVGDVVCFHVQLTSPDGVHGT
WSSSADGVLQVDPKSGAAVARDSGTVTVYYEIPGVLKTYREVVVEAPTRTSAMAQASPVR
PGKETKVLLTTRDRGTNLIGTCSPTQMEAISQLQPETSVSCHLGFTGDAVDFSANDVFRI
RVGFDSSIGLYTCSMTLQPMTERQTHVLSMSMAHLLVKAGLAGGVFTGEQVSTRLPIEPS
LYSDQTELLLSNVHPSAEFTVYGPTTILSNMEVVSTSPSIVVKEKEVHHGFPSYSKYTVS
AVDPQPAASASITISSSASGQSFVIPLTFVHSADFSTAKQASPQAGVMEEGSSLHSFINS
YQMMFCTLFALLAGTAIVIIVLHSLFSPKEQTYHPAFIQRTPPPMTAFDSPGTNSYNHVI
PRPSPNSSPRVRLFSPDYKS
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactgtttgtgttgttgttactgaccgccatcgaggtggatggctcgtctaaa
ctaaatattcccaaagtgttgctcccgctcgccagaactacaagaattaacttcactctg
gagaccacggaaggctgctacagatggacgtccaccagacctgaagtagcgagcatccag
cctgtggatgaggatggcgccagaggctgctctcgcagtgctgtcctgcaggccctgtcc
acccagccctccagactgaccagcattatcttagctgaagatgttgttacgggacaggtc
ctgcgctgtgatgctattgtcgacatcatcagcgacatccagatagtctccaccaccaga
gagctacatctggaggactctccgctggctcttaagattcacgcactggactctgaagga
aacaccttcagtacccttgccggtctggtttttgactggaccttagtgaaagatgtagat
gtgaacggatttactgactcctacaattcattacgggtgctcaaattttctgagtccaca
tacacccctcctggatacatttcagaaatggagcgagttgggaaacagggtgatattatc
ctggtgtcaggactgaaaacaggacacgcaaagctcaaggccaaaatacaagaaccactg
tacaaggatgtgggtgctgccgaggtgagactgctcatcttagagaacatcctgctgagc
cctgcacatgatgtctacttgctggcaggaacttcaatcagatacagagtgctgaagata
agacaagggacgatcacagagctgtccatgccttgtgatcaatacgaactgcacctccag
aacagtgtggttggccctaatggaaacccagatgttgccgtggccagcttggaccacagc
acctccacagttacagctgttcaactgggacacattaatgtggtgctggatcataagagc
cttctgatgcagggagtgtctcgcctccccaacagcactctctttgttgttgaaccagcc
tacctaggttttaaaatccatccaggagacagctgggttcttgaaacgggcagagtgtac
gatattctcattgaagtgttcgataaatccagcaacaaaatttatctgtctgataacatc
cgcatcgacaccgtgttccctgtggagtattttgagatcctacagtcctctccaaatgga
tcatatcatcacgtcagggccctcagagatggcctgactctcatcgacgcaacgctgaaa
gcggttcaggatgaaagaggaagggtccatgcgttggccaaccccgttcacaatgaacag
gatgtggaaatttataaccccatagtcctcactcccagtattctcacctttccatggcaa
ccgaaagttggggcttatcagtatacagtaaaggcgacaggcgggagtggcaatttcagc
tggtcttcatccaatacagctgtggccacagtgaccgtgaaaggagttatgaccacagtc
agcgacattggcgtcaccacaatttatgctcacgatctgcgtaaccctctccactttggt
caaatgaaggtgtatgttgttgagcctgtagccatggactttgctccttgcccagtagaa
gccaggttaggtctggttctggacctgcccctcaggatttttggcccgctggaggagctg
gagagagagcgggtcatgttaagtgactgctcccactttgatctgctggttgaacaggag
aaccacggggtctttgaattactagatgggaggctggctccaggccagaaccactgcagt
ggagttcgagccaaggccctgtctcctgggtacacagtgcttactgtcagctacactcat
ggcaacattcacctcagcgccaagatcaccatcgctgcctaccttcctctcaaagcagtt
gatcccgtgtccgtggctgtggtcactctgggatcctctaaggacatgctgtttgagggt
ggcccacggccctgggttttagaaccttcaaagttcttctgcacttcgagagctgaggac
gagtccagcctgagccttactctgaccagtccctcatcccacaactataaccagcactgg
ctccgagcgacctgcagggctctgggagagcaggtgcttgaggtgacggtggggaacaag
gccagtgtgaccaatccatttcctgctgtggagccagctgtggtgaagtttgtgtgtgcg
cctccatcacgcctcactctggttccagtttacacgagtccacagctggacctgagctgc
ccactgctgaaacagaacaaacaggtggtccctgtttcaaattatcgtaaccccattttg
gacttggcagcttttgatcaacaaggaagaaagtttgacaactttagctccctgagcatg
ttgtgggagtcatcgaggccgtctctggccagtatcgagtccagtatgcccatggagcta
caaccattagaagataacaataaacagatgaaactccatggtcgtcagacggttctcgtc
catcagcagacggggatagcagccattacagtgacggctcttggatatcaggtcccacat
ctagcagcagccaaagttcccagtccatacgacccgctcactcctgtctctgccacactg
gagcttctcttagttgaagatgtgaaagtttttcctgatactgtgactatttacaaccac
ccagatgttcagttaaatctggccttaaaagagggttcaggccacttctttgtcaacacc
agtgtgaaagggatcgtgaatgtgcttttccaagaggcccaaagcacagctcaggtttct
ccagtccatccaggcacggtgaaagtgatggttcacgatctctgtctggcctttccagct
ccagctgaagccacagttcatgtttctgacatcctggaggtttatgtgagagtggttgac
aaggtggagatcgggaaatctgtaaaagcttatgtcagagtcttggatggtaataagaag
cctttcccatccaactatttccagttcatgaaccttaaactcaaggcagcttctgcgata
gtttctctccggccgttagcagaatccacagaaagtgacacagcagtgtttctggtgaag
ggagctgttattggtcagactactctgtcagctgttgttgtggataaaaacggaagaaaa
attgcctctgcaccacagcaaattgaggtctttccaccgttcaaactcatcccaaggaaa
atgactctgttaataggagcgatgatgcagatcacatcagagggtggtcctcagcctcag
tcccatataattttttccatttccgatgaagacatagcttctgttaatgcgatgggtcac
gttagaggtgcccatgtcggtaacgttacagtaacggggctggtccaagccgttgatgct
gagactgggaagctcgtcatcgtctctcaggatcaagtagaggtagaggttgtgtttttg
acggccattcgaatcagagcgcctattacaagaatgaaaacaggagcacagatgccggta
tatgtgatggggctgaccaacagtcagactcccttctcctttggaagtgttctgcccagt
ctcaccttctactggtccaccaccaagagagacattctggacgtccagcccaggcactcc
gagaccaacgtcaaccttcagccggagcacaacttcgccatgagagtaacgggaaggatg
aggggtcggaccgggctgaaggtggttctcagagttaccgacccaaaggctcagcagctg
caggggagcctacaggagctcagtgatgaaatccagatccaggtctacgacaagctgcaa
gtgctcagtcctcagatacaggctgaggagttactgctggctccaaactcagtcctcaaa
ctccaaacgaacagggacggcgtgggtgcgctctcctaccggatgctggacttgcccgac
caggtcgtcgtcacccaggttgacgataaaggcctcctctcctctggctccctcactggc
atctcttctctgctgatcacctcgcaggagacgttcggcgtcaatcaaacgctcatcctc
accgtaaaggtggtccctgtgtcctatatccgcttcagtgccggccccgtgctccacacc
cagacacgagagggcctgactgcctttcccctgggaatgctgctcaccttcactgcacac
tttcacgctagcaccggagaggctcttcacagctccaactcccaccttacgttttctacc
aacagagatgatcttgtgcaggtgggggtcggcccctctaatcacacgctgacggtgaga
accgtcaacgtgggtctgacgcttctcgcagcgtgggacaacgagaacatgggcgtggca
gattacgttccacttcctgtccagcacgccatctacatggacgagtccaacaaactggtg
gtgggagacgtggtctgcttccacgtccagttaacgagcccagatggtgttcacggtaca
tggagctcctctgcagacggggtacttcaggtggaccctaagagtggtgcggctgtagcc
agagactctgggaccgtcactgtatactatgaaatacctggagttttgaaaacctacaga
gaggttgttgtggaagcaccaacgagaacatcagccatggctcaggcttcacctgtcaga
cctggcaaagagacgaaggttcttctaacgaccagagacagaggaaccaacctaattgga
acctgctctccaacccagatggaagccatttcacagctgcagccagaaacatctgtaagc
tgtcatctgggctttacgggcgacgccgtcgatttctctgctaacgacgtcttcagaata
cgcgtcggcttcgactccagcatcggcctctacacatgctccatgaccttgcagcctatg
accgagcggcagacccatgtgctcagcatgtccatggcccacctgctggtgaaggcaggc
ctggcaggcggcgtcttcaccggggagcaagtcagcaccaggctgcccatagagccgagc
ctgtactcagaccagaccgagctgctgctctctaacgtgcacccatctgctgagtttact
gtttacggacccaccaccatcctgtctaacatggaggtggtgtctacctctcccagcatc
gttgtcaaagagaaggaggtccaccacggcttccccagttactccaagtacacagttagt
gctgtggacccccaaccagcagcttcagcttccattactataagcagctccgcctctggg
cagagttttgtaatcccactcacttttgttcattcagctgatttcagcacagccaagcaa
gcatctcctcaagctggtgtcatggaggagggcagctctctgcacagcttcataaactcc
taccagatgatgttctgcaccttgtttgctctgctggctggtacagctatagtcatcatc
gtcctccactctctgttctctccaaaggaacaaacgtaccaccctgcgttcatccagagg
accccaccgcccatgacagctttcgactctccaggaacaaactcctacaaccacgtgatc
cccaggcccagcccaaacagcagtcccagagtgcgcctgttctctccagactacaaatcc
tga
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